miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41156_tcc-MIR403b:mirbase
          Length = 123

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 97  gtgttagattcacgcacaaactcgtgatgtgtct 130
           |||||||||||||||||||||||||||| |||||
Sbjct: 80  gtgttagattcacgcacaaactcgtgatctgtct 113




>40390_rco-MIR403b:mirbase
          Length = 98

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 97  gtgttagattcacgcacaaactcgtgat 124
           ||||||||||||||||||||||||||||
Sbjct: 70  gtgttagattcacgcacaaactcgtgat 97




>40389_rco-MIR403a:mirbase
          Length = 95

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 97  gtgttagattcacgcacaaactcgtgat 124
           ||||||||||||||||||||||||||||
Sbjct: 67  gtgttagattcacgcacaaactcgtgat 94




>41679_vvi-MIR403c:mirbase
          Length = 115

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 99  gttagattcacgcacaaactcgtgatgtgtc 129
           |||||||||||||||||||||||||| ||||
Sbjct: 84  gttagattcacgcacaaactcgtgatctgtc 114




>41680_vvi-MIR403d:mirbase
          Length = 86

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 97  gtgttagattcacgcacaaactcgtgatgtgtct 130
           |||||||||||||||||||||||| ||| |||||
Sbjct: 53  gtgttagattcacgcacaaactcgggatctgtct 86




>41678_vvi-MIR403b:mirbase
          Length = 86

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 97  gtgttagattcacgcacaaactcgtgatgtgtct 130
           |||||||||||||||||||||||| ||| |||||
Sbjct: 53  gtgttagattcacgcacaaactcgggatctgtct 86




>41677_vvi-MIR403a:mirbase
          Length = 115

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 99  gttagattcacgcacaaactcgtga 123
           |||||||||||||||||||||||||
Sbjct: 84  gttagattcacgcacaaactcgtga 108




>41155_tcc-MIR403a:mirbase
          Length = 126

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 9  tttcgggtttgtgcgtgaatttaataaaa 37
          |||| ||||||||||||||||||||||||
Sbjct: 16 tttcaggtttgtgcgtgaatttaataaaa 44



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 98  tgttagattcacgcacaaactcgtgatgtgtct 130
           |||||||||||||||||||||||| || |||||
Sbjct: 84  tgttagattcacgcacaaactcgtaatctgtct 116




>41682_vvi-MIR403f:mirbase
          Length = 108

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 100 ttagattcacgcacaaactcgtgatgtgtct 130
           |||||||||||||||||||||| || |||||
Sbjct: 78  ttagattcacgcacaaactcgtaatctgtct 108




>41681_vvi-MIR403e:mirbase
          Length = 115

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 99  gttagattcacgcacaaactcgtgatgtgtc 129
           |||||||||||||||||||||| ||| ||||
Sbjct: 84  gttagattcacgcacaaactcgcgatctgtc 114




>41461_ptc-MIR403b:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 99  gttagattcacgcacaaactcgtgatgtgtc 129
           |||||||||||||||||||||| ||| ||||
Sbjct: 70  gttagattcacgcacaaactcgcgatctgtc 100




>40101_ath-MIR403:mirbase
          Length = 135

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 100 ttagattcacgcacaaactcgtgatgtgtct 130
           |||||||||||||||||||||| || |||||
Sbjct: 103 ttagattcacgcacaaactcgtaatctgtct 133




>39896_aly-MIR403:mirbase
          Length = 125

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 100 ttagattcacgcacaaactcgtgatgtgtct 130
           |||||||||||||||||||||| || |||||
Sbjct: 91  ttagattcacgcacaaactcgtaatctgtct 121




>41460_ptc-MIR403a:mirbase
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 100 ttagattcacgcacaaactcgt 121
           ||||||||||||||||||||||
Sbjct: 103 ttagattcacgcacaaactcgt 124




>41462_ptc-MIR403c:mirbase
          Length = 79

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 100 ttagattcacgcacaaactcg 120
           |||||||||||||||||||||
Sbjct: 59  ttagattcacgcacaaactcg 79