miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 87.7 bits (44), Expect = 2e-18
Identities = 78/87 (89%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 57 aagacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctc 114
|||||||||||||||||||||||||||||| | | |||||| || || |||||||||||
Sbjct: 12 aagacggggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctc 70
Query: 115 ctcccatgcactgcctcttccctggct 141
|||||||||||||||||||||||||
Sbjct: 71 tacccatgcactgcctcttccctggct 97
>40108_ath-MIR408:mirbase
Length = 218
Score = 60.0 bits (30), Expect = 5e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 101 ctctgttttggctcctcccatgcactgcctcttccctggctc 142
|||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 101 ctctgttttgtctctacccatgcactgcctcttccctggctc 142
>39897_aly-MIR408:mirbase
Length = 211
Score = 60.0 bits (30), Expect = 5e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 101 ctctgttttggctcctcccatgcactgcctcttccctggctc 142
|||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 98 ctctgttttgtctctacccatgcactgcctcttccctggctc 139
>41683_vvi-MIR408:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 103 ctgttttggctcctcccatgcactgcctcttccctggctct 143
||||||| |||| |||||||||||||||||||||||||||
Sbjct: 60 ctgtttttgctctacccatgcactgcctcttccctggctct 100
>40391_rco-MIR408:mirbase
Length = 92
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 102 tctgttttggctcctcccatgcactgcctcttccctggct 141
||||||||||||| ||| |||||||||||||||||||||
Sbjct: 49 tctgttttggctctacccctgcactgcctcttccctggct 88
>40405_ahy-MIR408:mirbase
Length = 122
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 119 catgcactgcctcttccctggctctct 145
|||||||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggctctct 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 gggaacaggcagagcatggatggaac 88
|||||||||||||||||| |||||||
Sbjct: 23 gggaacaggcagagcatgaatggaac 48
>40404_ahy-MIR408:mirbase
Length = 122
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 119 catgcactgcctcttccctggctctct 145
|||||||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggctctct 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 gggaacaggcagagcatggatggaac 88
|||||||||||||||||| |||||||
Sbjct: 23 gggaacaggcagagcatgaatggaac 48
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 113 tcctcccatgcactgcctcttccctggctc 142
||||||| ||||||||||||||||||||||
Sbjct: 219 tcctcccctgcactgcctcttccctggctc 248
>42464_sof-MIR408c:mirbase
Length = 286
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 113 tcctcccatgcactgcctcttccctggctc 142
||||||| ||||||||||||||||||||||
Sbjct: 240 tcctcccctgcactgcctcttccctggctc 269
>42463_sof-MIR408b:mirbase
Length = 286
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 113 tcctcccatgcactgcctcttccctggctc 142
||||||| ||||||||||||||||||||||
Sbjct: 240 tcctcccctgcactgcctcttccctggctc 269
>42462_sof-MIR408a:mirbase
Length = 283
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 113 tcctcccatgcactgcctcttccctggctc 142
||||||| ||||||||||||||||||||||
Sbjct: 237 tcctcccctgcactgcctcttccctggctc 266
>42830_zma-MIR408b:mirbase
Length = 147
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 114 cctcccatgcactgcctcttccctggctc 142
|||||| ||||||||||||||||||||||
Sbjct: 119 cctcccctgcactgcctcttccctggctc 147
>42829_zma-MIR408:mirbase
Length = 191
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 114 cctcccatgcactgcctcttccctggctc 142
|||||| ||||||||||||||||||||||
Sbjct: 146 cctcccctgcactgcctcttccctggctc 174
>42600_sbi-MIR408:mirbase
Length = 205
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 113 tcctcccatgcactgcctcttccctggct 141
||||||| |||||||||||||||||||||
Sbjct: 177 tcctcccctgcactgcctcttccctggct 205
>42052_osa-MIR408:mirbase
Length = 213
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 114 cctcccatgcactgcctcttccctggctc 142
|||||| ||||||||||||||||||||||
Sbjct: 147 cctcccctgcactgcctcttccctggctc 175
>41193_aqc-MIR408:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 118 ccatgcactgcctcttccctggct 141
||||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggct 1
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 catgcactgcctcttccctggct 141
|||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggct 114
>39428_pta-MIR408:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 120 atgcactgcctcttccctggctc 142
|||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggctc 86
>42647_tae-MIR408:mirbase
Length = 187
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 121 tgcactgcctcttccctggctc 142
||||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggctc 158
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 121 tgcactgcctcttccctggctc 142
||||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggctc 180
>42465_sof-MIR408d:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 121 tgcactgcctcttccctggctc 142
||||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggctc 198
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 atgcactgcctcttccctggct 141
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
