miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41089_tcc-MIR160c:mirbase
          Length = 120

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                       
Query: 8   atctgcctggctccctggatgccaactaagaaatttgtcgagtggtcttgactcttcata 67
           |||||||||||||||||||||||||||||| |   ||||||   |  ||| | |||| ||
Sbjct: 18  atctgcctggctccctggatgccaactaaggatgctgtcgacaaggattggcccttccta 77

                                         
Query: 68  gttggcatcagaggagtcatgcaggtccaa 97
           ||||||||||||||||||| ||||||||||
Sbjct: 78  gttggcatcagaggagtcaagcaggtccaa 107




>41573_vvi-MIR160a:mirbase
          Length = 103

 Score = 71.9 bits (36), Expect = 8e-14
 Identities = 76/87 (87%), Gaps = 3/87 (3%)
 Strand = Plus / Plus

                                                                      
Query: 8  atctgcctggctccctggatgccaactaagaaatttgtcgagtggtcttga--ctcttca 65
          ||||||||||||||||| |||||| |||||||  ||||| || | | ||||  |||||| 
Sbjct: 8  atctgcctggctccctgaatgccatctaagaagcttgtcaag-gttgttgactctcttcc 66

                                     
Query: 66 tagttggcatcagaggagtcatgcagg 92
          |||||||||||||||||||||||||||
Sbjct: 67 tagttggcatcagaggagtcatgcagg 93




>41165_aqc-MIR160a:mirbase
          Length = 83

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 11 tgcctggctccctggatgccaactaagaa 39
          ||||||||||||||||||||| |||||||
Sbjct: 1  tgcctggctccctggatgccatctaagaa 29




>40341_rco-MIR160c:mirbase
          Length = 94

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 8  atctgcctggctccctggatgccaactaagaa 39
          ||||||||||||||||| |||||| |||||||
Sbjct: 3  atctgcctggctccctgaatgccatctaagaa 34




>41574_vvi-MIR160b:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 9  tctgcctggctccctggatgccaactaagaa 39
          |||||||||||||||| |||||| |||||||
Sbjct: 9  tctgcctggctccctgaatgccatctaagaa 39




>41087_tcc-MIR160a:mirbase
          Length = 122

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 9  tctgcctggctccctggatgccaactaagaa 39
          |||||||||||||||| |||||| |||||||
Sbjct: 19 tctgcctggctccctgaatgccatctaagaa 49




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 4  atcaatctgcctggctccctggatgcca 31
          |||| |||||||||||||||| ||||||
Sbjct: 4  atcactctgcctggctccctgtatgcca 31




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 8  atctgcctggctccctggatgcca 31
          ||||||||||||||||| ||||||
Sbjct: 17 atctgcctggctccctgtatgcca 40