miRNEST 2.0, an integrative microRNA resource :: BLAST
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 125 bits (63), Expect = 6e-30
Identities = 91/100 (91%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 1 aaaagaaagcgatgttggtgaggttcaatccgaagacagatttacacg----agtgaaag 56
||||||||||||||||||||||||||||||||||||| |||||||||| ||| | |
Sbjct: 1 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattg 60
Query: 57 taaaatccgatctcagattgagccgcgccaatatcacttt 96
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 taaaatacgatctcagattgagccgcgccaatatcacttt 100
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 99.6 bits (50), Expect = 4e-22
Identities = 83/93 (89%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 6 aaagcgatgttggtgaggttcaatccgaagacagatttacacgagtgaa--agtaaaatc 63
|||||||||||||||||||||||||||||||| |||||||| | | | |||||||
Sbjct: 1 aaagcgatgttggtgaggttcaatccgaagacggatttacatgtatagagttgtaaaata 60
Query: 64 cgatctcagattgagccgcgccaatatcacttt 96
|||||||||||||||||||||||||||||||||
Sbjct: 61 cgatctcagattgagccgcgccaatatcacttt 93
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 97.6 bits (49), Expect = 1e-21
Identities = 85/96 (88%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 3 aagaaagcgatgttggtgaggttcaatccgaagacagatttacacgagtgaaagtaaaat 62
|||||||||||||||||||||||||||| ||||| |||||| | |||| ||||||
Sbjct: 4 aagaaagcgatgttggtgaggttcaatctgaagattgatttatgct--tgaatgtaaaaa 61
Query: 63 ccgatctcagattgagccgcgccaatatcacttttc 98
| ||||||||||||||||||||||||||||||||||
Sbjct: 62 ctgatctcagattgagccgcgccaatatcacttttc 97
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 91.7 bits (46), Expect = 9e-20
Identities = 88/100 (88%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 1 aaaagaaagcgatgttggtgaggttcaatccgaagacagatttacac---gagtga-aag 56
||||||||||||||||||||||||||||||||||||| ||||||| | | | | |
Sbjct: 9 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcg 68
Query: 57 taaaatccgatctcagattgagccgcgccaatatcacttt 96
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 69 taaaatacgatctcagattgagccgcgccaatatcacttt 108
>40365_rco-MIR171g:mirbase
Length = 89
Score = 81.8 bits (41), Expect = 9e-17
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 8 agcgatgttggtgaggttcaatccgaagacagatttacacgagtgaaagtaaaatccgat 67
|||||||||||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacggatttacacattctgttgtaaaggacgat 60
Query: 68 ctcagattgagccgcgccaatatcacttt 96
|||||||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcacttt 89
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 75.8 bits (38), Expect = 5e-15
Identities = 83/96 (86%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 2 aaagaaagcgatgttggtgaggttcaatccgaagacagatttac-acgagtgaaagtaaa 60
|||| ||||||||||||||||||||||||||||||| ||||||| | ||| |||||
Sbjct: 3 aaagtaagcgatgttggtgaggttcaatccgaagacggatttacgaagag---ccgtaaa 59
Query: 61 atccgatctcagattgagccgcgccaatatcacttt 96
||||||| |||||||||||||||||||||||||
Sbjct: 60 gaacgatctctgattgagccgcgccaatatcacttt 95
>41541_sly-MIR171d:mirbase
Length = 112
Score = 65.9 bits (33), Expect = 5e-12
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 7 aagcgatgttggtgaggttcaatccgaagacagatttacacgagtgaaagtaaaatccga 66
||||||||||||||||||||||||||||||| ||||| | | ||||| |||
Sbjct: 8 aagcgatgttggtgaggttcaatccgaagacgaatttatgcttattttcgtaaagaacga 67
Query: 67 tctcagattgagccgcgccaatatcactt 95
|||||||||||||||||||||||||||||
Sbjct: 68 tctcagattgagccgcgccaatatcactt 96
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 69 tcagattgagccgcgccaatatcacttt 96
||||||||||||||||||||||||||||
Sbjct: 78 tcagattgagccgcgccaatatcacttt 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 gcgatgttggtgaggttcaatccgaaga 36
|||||||||||||||||||||| |||||
Sbjct: 19 gcgatgttggtgaggttcaatctgaaga 46
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 68 ctcagattgagccgcgccaatatcac 93
||||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 69 tcagattgagccgcgccaatatcac 93
|||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatcac 85
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatcactt 95
||||||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatcactt 107
>39739_smo-MIR171d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 67 tctcagattgagccgcgccaatatcac 93
||||| |||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatcac 91
>41981_osa-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 agcgatgttggtgaggttcaatccga 33
|||||| |||||||||||||||||||
Sbjct: 7 agcgatattggtgaggttcaatccga 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>41540_sly-MIR171c:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatcac 93
||||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcac 100
>41231_csi-MIR171a:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatcac 93
||||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatcac 89
>41211_ccl-MIR171:mirbase
Length = 321
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatcac 93
||||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatcac 144
>42774_zma-MIR171n:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>42761_zma-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>40322_bra-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgcgccaatatc 91
||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150
>39736_smo-MIR171a:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 71 agattgagccgcgccaatatcact 94
||||||||||| ||||||||||||
Sbjct: 102 agattgagccgtgccaatatcact 125
