miRNEST 2.0, an integrative microRNA resource :: BLAST
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 69.9 bits (35), Expect = 4e-13
Identities = 78/90 (86%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 16 tatatgcctggctccctgtatgccatttgcaaagctcaccgtaatatatcgatgggcctt 75
||||||||||||||||||||||||||||||| ||| ||||| | |||||| ||||||
Sbjct: 7 tatatgcctggctccctgtatgccatttgcagagcccaccg--gcacatcgat-ggcctt 63
Query: 76 gttgaatggcgtatgaggagccaagcatat 105
|| |||||||||||||||||| ||||||
Sbjct: 64 cgtggatggcgtatgaggagccatgcatat 93
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgccatttgcaaagc 50
|||||||||||||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgccatttgcaaagc 51
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 19 atgcctggctccctgtatgccatttgcaaag 49
|||||||||||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccatttgcaaag 40
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccatttgcaaagctcaccg 56
||||||||||||||||||||||||||| ||| |||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccg 47
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 81 atggcgtatgaggagccaagcatattcc 108
||||||||||||||||||||||||||||
Sbjct: 64 atggcgtatgaggagccaagcatattcc 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 gtatatgcctggctccctgtatgccat 41
|||| ||||||||||||||||||||||
Sbjct: 1 gtatgtgcctggctccctgtatgccat 27
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 81 atggcgtatgaggagccaagcatattcc 108
||||||||||||||||||||||||||||
Sbjct: 64 atggcgtatgaggagccaagcatattcc 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 gtatatgcctggctccctgtatgccat 41
|||| ||||||||||||||||||||||
Sbjct: 1 gtatgtgcctggctccctgtatgccat 27
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccatttgca 46
|||||||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgca 37
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 atggcgtatgaggagccaagcatattc 107
|||||||||||||||||| ||||||||
Sbjct: 69 atggcgtatgaggagccatgcatattc 95
>41219_csi-MIR160:mirbase
Length = 143
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccatttgca 46
|||||||||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgccatttgca 59
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 81 atggcgtatgaggagccaagcatattcc 108
|||||||||||||||||| |||||||||
Sbjct: 91 atggcgtatgaggagccatgcatattcc 118
>40436_gma-MIR160:mirbase
Length = 119
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 15 gtatatgcctggctccctgtatgccatttgcaaagctca 53
|||| ||||||||||||||||||||||||| | ||||||
Sbjct: 16 gtatgtgcctggctccctgtatgccatttgtagagctca 54
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 81 atggcgtatgaggagccaagcatatt 106
||||||||||||||||||||||||||
Sbjct: 79 atggcgtatgaggagccaagcatatt 104
>41312_ptc-MIR160h:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccatttgcaaagctca 53
|||||||||||||| |||||||||||| ||||||
Sbjct: 11 tgcctggctccctgcatgccatttgcatagctca 44
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccatttgc 45
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgc 26
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccatttg 44
|||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccatttg 30
>40658_mtr-MIR160:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccatttg 44
|||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccatttg 45
>40339_rco-MIR160a:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccatttg 44
|||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccatttg 30
>40312_bra-MIR160a:mirbase
Length = 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 78 tgaatggcgtatgaggagccaagcatatt 106
||||||||||||||||||||| |||||||
Sbjct: 80 tgaatggcgtatgaggagccatgcatatt 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgccat 41
||||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgccat 47
>42705_zma-MIR160e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcca 40
||||||||||||||||||||||||
Sbjct: 6 atatgcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcca 40
||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41
>42636_tae-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcca 40
||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42
>41926_osa-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcca 40
||||||||||||||||||||||||
Sbjct: 5 atatgcctggctccctgtatgcca 28
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcca 40
||||||||||||||||||||||||
Sbjct: 29 atatgcctggctccctgtatgcca 52
>40019_ath-MIR160a:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgccat 41
||||||||||||||||||||||||
Sbjct: 2 tatgcctggctccctgtatgccat 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 81 atggcgtatgaggagccaagcatat 105
|||||||||||||||||| ||||||
Sbjct: 61 atggcgtatgaggagccatgcatat 85
>39807_aly-MIR160a:mirbase
Length = 158
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgccat 41
||||||||||||||||||||||||
Sbjct: 40 tatgcctggctccctgtatgccat 63
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 81 atggcgtatgaggagccaagcatat 105
|||||||||||||||||| ||||||
Sbjct: 99 atggcgtatgaggagccatgcatat 123
>42706_zma-MIR160f:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcc 39
|||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40
>41927_osa-MIR160e:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcc 39
|||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcc 30
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgcca 40
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgcca 40
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgcca 40
|||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgcca 40
|||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgcca 40
|||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 atgcctggctccctgtatgcca 40
||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgcca 22
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 atgcctggctccctgtatgcca 40
||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccat 41
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccatttgc 45
||||||||||||||||||||| ||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccat 41
||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41
>42703_zma-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41925_osa-MIR160c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>40020_ath-MIR160b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>39808_aly-MIR160b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34
