miRNEST 2.0, an integrative microRNA resource :: BLAST
>41182_aqc-MIR171f:mirbase
Length = 88
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 56 gttatttaattgagccgtgccaatatcacgt 86
|||||||||||||||||||||||||||||||
Sbjct: 56 gttatttaattgagccgtgccaatatcacgt 86
>40360_rco-MIR171b:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 4e-09
Identities = 74/87 (85%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 1 acgagatattggtgcggttcaattagaaagcgcacttctttatatatagaac-ttcgtta 59
||||||||||||||||||||||| || || || | || |||||||||| | || |||
Sbjct: 3 acgagatattggtgcggttcaatcag--agatcattgctctatatatagagcttttgttg 60
Query: 60 tttaattgagccgtgccaatatcacgt 86
||| |||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcacgt 87
>41540_sly-MIR171c:mirbase
Length = 121
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 acgagatattggtgcggttcaattagaaagc 31
||||||||||||||||||||||| |||||||
Sbjct: 16 acgagatattggtgcggttcaatgagaaagc 46
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
||||||||| |||||||||||||
Sbjct: 80 attgagccgcgccaatatcacgt 102
>41179_aqc-MIR171c:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 56 gttatttaattgagccgtgccaatatc 82
|||||||||||||||||||||||||||
Sbjct: 27 gttatttaattgagccgtgccaatatc 1
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 3 gagatattggtgcggttcaattagaaa 29
|||||||| ||||||||||||||||||
Sbjct: 80 gagatattagtgcggttcaattagaaa 54
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 56 gttatttaattgagccgtgccaatatcacgt 86
||||||| |||||||||||||||||||||||
Sbjct: 71 gttatttgattgagccgtgccaatatcacgt 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 cgagatattggtgcggttcaat 23
||||||||||||||||||||||
Sbjct: 18 cgagatattggtgcggttcaat 39
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 56 gttatttaattgagccgtgccaatatcacgt 86
||||||| |||||||||||||||||||||||
Sbjct: 61 gttatttgattgagccgtgccaatatcacgt 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 gagatattggtgcggttcaattagaa 28
||||||||||||||||||||| ||||
Sbjct: 4 gagatattggtgcggttcaatcagaa 29
>40457_gma-MIR171c:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 56 gttatttaattgagccgtgccaatatcac 84
||||||| |||||||||||||||||||||
Sbjct: 66 gttatttgattgagccgtgccaatatcac 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 gagatattggtgcggttcaattagaa 28
||||||||||||||||||||| ||||
Sbjct: 11 gagatattggtgcggttcaatcagaa 36
>40062_ath-MIR171c:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 acgagatattggtgcggttcaattagaaa 29
||||||||||||||||||||||| |||||
Sbjct: 25 acgagatattggtgcggttcaatcagaaa 53
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 57 ttatttaattgagccgtgccaatatcacg 85
|||||| ||||||||||||||||||||||
Sbjct: 82 ttatttgattgagccgtgccaatatcacg 110
>39851_aly-MIR171c:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 acgagatattggtgcggttcaattagaaa 29
||||||||||||||||||||||| |||||
Sbjct: 12 acgagatattggtgcggttcaatcagaaa 40
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 76 attgagccgtgccaatatcacgt 98
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 59 atttaattgagccgtgccaatatcacgt 86
|||| |||||||||||||||||||||||
Sbjct: 74 atttgattgagccgtgccaatatcacgt 101
>40305_bol-MIR171a:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 cgagatattggtgcggttcaattagaaa 29
|||||||||||||||||||||| |||||
Sbjct: 7 cgagatattggtgcggttcaatcagaaa 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatcacg 91
>40288_bna-MIR171d:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 cgagatattggtgcggttcaattagaaa 29
|||||||||||||||||||||| |||||
Sbjct: 7 cgagatattggtgcggttcaatcagaaa 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatcacg 91
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 92 attgagccgtgccaatatcacgt 114
>42763_zma-MIR171c:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 gatattggtgcggttcaattagaaagc 31
||||||||||||||||||| |||||||
Sbjct: 21 gatattggtgcggttcaatcagaaagc 47
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 tgagccgtgccaatatcacgt 86
|||||||||||||||||||||
Sbjct: 83 tgagccgtgccaatatcacgt 103
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacgt 86
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 95 attgagccgtgccaatatcacgt 117
>41983_osa-MIR171c:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 gatattggtgcggttcaattagaaagc 31
||||||||||||||||||| |||||||
Sbjct: 11 gatattggtgcggttcaatcagaaagc 37
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 71 attgagccgtgccaatatcacgt 93
>41982_osa-MIR171b:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 72 attgagccgtgccaatatcacgt 94
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 acgagatattggtgcggttcaattagaaagc 31
||||||||||| | |||||||||||||||||
Sbjct: 8 acgagatattgatacggttcaattagaaagc 38
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 69 attgagccgtgccaatatcacgt 91
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 gatattggtgcggttcaattagaaagc 31
||||||||||||||||||| |||||||
Sbjct: 12 gatattggtgcggttcaataagaaagc 38
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 72 attgagccgtgccaatatcacgt 94
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 acgagatattggtgcggttcaat 23
|||||||||||||||||||||||
Sbjct: 10 acgagatattggtgcggttcaat 32
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 73 attgagccgtgccaatatcacgt 95
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 74 attgagccgtgccaatatcacgt 96
>41216_crt-MIR171:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 163 attgagccgtgccaatatcacgt 185
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 gatattggtgcggttcaattagaaa 29
||||||||||||||||||| |||||
Sbjct: 104 gatattggtgcggttcaataagaaa 128
>40359_rco-MIR171a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
|||||||||||||||||||||||
Sbjct: 66 attgagccgtgccaatatcacgt 88
>42762_zma-MIR171b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacg 85
>42641_tae-MIR171b:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 91 attgagccgtgccaatatcacg 112
>40454_gma-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatcacg 91
>40321_bra-MIR171d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 72 attgagccgtgccaatatcacg 93
>40320_bra-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 66 attgagccgtgccaatatcacg 87
>40319_bra-MIR171b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 73 attgagccgtgccaatatcacg 94
>40318_bra-MIR171a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacg 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 cgagatattggtgcggttcaattagaaa 29
||||||||||||| |||||||| |||||
Sbjct: 1 cgagatattggtgtggttcaatcagaaa 28
>40289_bna-MIR171e:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 69 attgagccgtgccaatatcacg 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 acgagatattggtgcggttcaattagaaa 29
|||||||||||||| |||||||| |||||
Sbjct: 5 acgagatattggtgtggttcaatcagaaa 33
>40287_bna-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 66 attgagccgtgccaatatcacg 87
>40286_bna-MIR171b:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 72 attgagccgtgccaatatcacg 93
>40285_bna-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 73 attgagccgtgccaatatcacg 94
>40061_ath-MIR171b:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 77 attgagccgtgccaatatcacg 98
>39850_aly-MIR171b:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacg 85
||||||||||||||||||||||
Sbjct: 88 attgagccgtgccaatatcacg 109
>42769_zma-MIR171i:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcac 84
|||||||||||||||||||||
Sbjct: 67 attgagccgtgccaatatcac 87
>42766_zma-MIR171f:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcac 84
|||||||||||||||||||||
Sbjct: 117 attgagccgtgccaatatcac 137
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcac 84
|||||||||||||||||||||
Sbjct: 124 attgagccgtgccaatatcac 144
>41986_osa-MIR171f:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcac 84
|||||||||||||||||||||
Sbjct: 99 attgagccgtgccaatatcac 119
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 tattggtgcggttcaattagaaagc 31
||||||||||||||||| |||||||
Sbjct: 6 tattggtgcggttcaatcagaaagc 30
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcac 84
|||||||||||||||||||||
Sbjct: 66 attgagccgtgccaatatcac 86
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcac 84
|||||||||||||||||||||
Sbjct: 73 attgagccgtgccaatatcac 93
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcac 84
|||||||||||||||||||||
Sbjct: 73 attgagccgtgccaatatcac 93
>41231_csi-MIR171a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 gatattggtgcggttcaattagaaa 29
||||||||||||||||||| |||||
Sbjct: 10 gatattggtgcggttcaataagaaa 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
||||||||| |||||||||||||
Sbjct: 69 attgagccgcgccaatatcacgt 91
>41211_ccl-MIR171:mirbase
Length = 321
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 gatattggtgcggttcaattagaaa 29
||||||||||||||||||| |||||
Sbjct: 65 gatattggtgcggttcaataagaaa 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcacgt 86
||||||||| |||||||||||||
Sbjct: 124 attgagccgcgccaatatcacgt 146
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcac 84
|||||||||||||||||||||
Sbjct: 57 attgagccgtgccaatatcac 77
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcac 84
|||||||||||||||||||||
Sbjct: 77 attgagccgtgccaatatcac 97
>39736_smo-MIR171a:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatcac 84
|||||||||||||||||||||
Sbjct: 104 attgagccgtgccaatatcac 124
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatca 83
||||||||||||||||||||
Sbjct: 71 attgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 attgagccgtgccaatatca 83
||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatca 89
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 atttaattgagccgtgccaatatc 82
|||| |||||||||||||||||||
Sbjct: 97 atttgattgagccgtgccaatatc 120
>39737_smo-MIR171b:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 ttgagccgtgccaatatcac 84
||||||||||||||||||||
Sbjct: 71 ttgagccgtgccaatatcac 90
