miRNEST 2.0, an integrative microRNA resource :: BLAST
>40465_gma-MIR319b:mirbase
Length = 208
Score = 85.7 bits (43), Expect = 1e-17
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
|||||||| ||||||||||| ||||||| |||| |||| |||| || |||||||||||||
Sbjct: 115 ctcagcaaatgagtgaatgatgcgggag-acaaattgattcttaagtttcctgtacttgg 173
Query: 154 actgaagggagctcc 168
|||||||||||||||
Sbjct: 174 actgaagggagctcc 188
>40367_rco-MIR319a:mirbase
Length = 211
Score = 83.8 bits (42), Expect = 4e-17
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 103 tgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttggactgaaggg 162
||||||||||| ||||||| |||| |||| |||| |||||||||||||||||||||||||
Sbjct: 140 tgagtgaatgatgcgggag-acaaattgaatcttaagcttcctgtacttggactgaaggg 198
Query: 163 agctcc 168
||||||
Sbjct: 199 agctcc 204
Score = 52.0 bits (26), Expect = 1e-07
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 5 ttctttagtccacacatggggaacgatagggttcaatttgctgccgactcattcatccaa 64
||||| ||||||| |||||| || |||| || |||| |||||||||||||||||||||
Sbjct: 12 ttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcattcatccaa 71
Query: 65 at 66
||
Sbjct: 72 at 73
>40464_gma-MIR319a:mirbase
Length = 207
Score = 77.8 bits (39), Expect = 2e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
||||||| ||||||||||| ||||||| |||| |||| |||| || |||||||||||||
Sbjct: 114 ctcagcagatgagtgaatgatgcgggag-acaaattgaatcttaagtttcctgtacttgg 172
Query: 154 actgaagggagctcc 168
|||||||||||||||
Sbjct: 173 actgaagggagctcc 187
Score = 65.9 bits (33), Expect = 9e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 36 ttcaatttgctgccgactcattcatccaaatgttgag 72
||||||| |||||||||||||||||||||||||||||
Sbjct: 59 ttcaattagctgccgactcattcatccaaatgttgag 95
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 75.8 bits (38), Expect = 9e-15
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 103 tgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttggactgaaggg 162
||||||||||| ||||||| |||| |||| || | |||||||||||||||||||||||||
Sbjct: 114 tgagtgaatgatgcgggag-acaaattgaatcctaagcttcctgtacttggactgaaggg 172
Query: 163 agctcc 168
||||||
Sbjct: 173 agctcc 178
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 39 aatttgctgccgactcattcatccaaat 66
|||| |||||||||||||||||||||||
Sbjct: 52 aattagctgccgactcattcatccaaat 79
>41282_ctr-MIR319:mirbase
Length = 186
Score = 75.8 bits (38), Expect = 9e-15
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 103 tgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttggactgaaggg 162
||||||||||| ||||||| |||| |||| |||| |||||||||| ||||||||||||||
Sbjct: 111 tgagtgaatgatgcgggag-acaaattgaatcttaagcttcctgtgcttggactgaaggg 169
Query: 163 agctcc 168
||||||
Sbjct: 170 agctcc 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 30 atagggttcaatttgctgccgactcattcatccaaat 66
||||| || |||| ||||| |||||||||||||||||
Sbjct: 40 ataggatttaattagctgctgactcattcatccaaat 76
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 69.9 bits (35), Expect = 6e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
|||| ||| ||||||||||| ||||||| |||| |||| |||| || ||||| |||||||
Sbjct: 101 ctcatcaaatgagtgaatgatgcgggag-acaaattgaatcttaagtttcctatacttgg 159
Query: 154 actgaagggagctcc 168
|||||||||||||||
Sbjct: 160 actgaagggagctcc 174
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 36 ttcaatttgctgccgactcattcatccaaatgttgag 72
||||||| ||||| |||||||||||||||||||||||
Sbjct: 43 ttcaattagctgctgactcattcatccaaatgttgag 79
>41185_aqc-MIR319:mirbase
Length = 177
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 36 ttcaatttgctgccgactcattcatcca 63
||||||||||||||||||||||||||||
Sbjct: 40 ttcaatttgctgccgactcattcatcca 67
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 139 gcttcctgtacttggactgaagggagctcc 168
||||| ||||||||||||||||||||||||
Sbjct: 144 gcttcttgtacttggactgaagggagctcc 173
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 52.0 bits (26), Expect = 1e-07
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 107 tgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttggactgaagggagct 166
||||||| ||||||| |||| ||| |||| |||| ||||| ||||||||||||||||||
Sbjct: 109 tgaatgatgcgggag-acaaattggatcttaagctccctgtgcttggactgaagggagct 167
Query: 167 cc 168
||
Sbjct: 168 cc 169
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 39 aatttgctgccgactcattcatccaaat 66
|||| |||||||||||||||||||||||
Sbjct: 52 aattagctgccgactcattcatccaaat 79
>40069_ath-MIR319a:mirbase
Length = 176
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 36 ttcaatttgctgccgactcattcatccaaat 66
||||||| ||| |||||||||||||||||||
Sbjct: 42 ttcaattagcttccgactcattcatccaaat 72
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 144 ctgtacttggactgaagggagctcc 168
|||| ||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctcc 180
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 144 ctgtacttggactgaagggagctcc 168
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 144 ctgtacttggactgaagggagctcc 168
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 33 gggttcaatttgctgccgactcattcat 60
||||| |||| |||||||||||||||||
Sbjct: 49 gggttgaattagctgccgactcattcat 76
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 144 ctgtacttggactgaagggagctcc 168
|||| ||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctcc 183
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 144 ctgtacttggactgaagggagctcc 168
|||| ||||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctcc 186
>40369_rco-MIR319c:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 144 ctgtacttggactgaagggagctcc 168
|||| ||||||||||||||||||||
Sbjct: 157 ctgtgcttggactgaagggagctcc 181
>39858_aly-MIR319a:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 38 caatttgctgccgactcattcatccaaat 66
||||| ||| |||||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
>42642_tae-MIR319:mirbase
Length = 211
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctcc 202
>41770_bdi-MIR319:mirbase
Length = 280
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctcc 244
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>40703_mtr-MIR319:mirbase
Length = 207
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctcc 187
>40368_rco-MIR319b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctcc 172
>40070_ath-MIR319b:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 151 cttggactgaagggagctcc 170
>39859_aly-MIR319b:mirbase
Length = 246
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 190 cttggactgaagggagctcc 209
>39740_smo-MIR319:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctcc 166
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 cttggactgaagggagctcc 168
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
