miRNEST 2.0, an integrative microRNA resource :: BLAST
>40007_ath-MIR156f:mirbase
Length = 132
Score = 69.9 bits (35), Expect = 4e-13
Identities = 81/96 (84%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 9 ggtgacagaggagagtgagcactcatggttcttttcttgcat----gaagtttctatgct 64
||||||||| |||||||||||| |||||| |||||||||| |||| ||| |||||
Sbjct: 19 ggtgacagaagagagtgagcacacatggtggctttcttgcatatttgaaggttccatgct 78
Query: 65 tgaagctctgtgtgcttactccctatctgtcacccc 100
||||||| |||||||| |||| ||||| ||||||||
Sbjct: 79 tgaagctatgtgtgctcactctctatccgtcacccc 114
>40649_mtr-MIR156b:mirbase
Length = 95
Score = 65.9 bits (33), Expect = 6e-12
Identities = 80/93 (86%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 8 aggtgacagaggagagtgagcactcatggttcttttcttgcatgaagtttctatgcttga 67
|||||||||| |||||||||||| |||||| | |||| || |||| ||||| || || ||
Sbjct: 3 aggtgacagaagagagtgagcacacatggtac-tttcgtgtatgatgtttc-attctcga 60
Query: 68 agctctgtgtgcttactccctatctgtcacccc 100
|||| |||||||| |||| ||||||||||||||
Sbjct: 61 agctatgtgtgctcactctctatctgtcacccc 93
>41563_vvi-MIR156c:mirbase
Length = 104
Score = 63.9 bits (32), Expect = 2e-11
Identities = 77/90 (85%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 7 taggtgacagaggagagtgagcactcatggttcttttcttgcatgaagtttctatgcttg 66
||||||||||| |||||||||||| ||||| ||| ||||||||| | || |||||||
Sbjct: 7 taggtgacagaagagagtgagcacacatgg-tctgttcttgcat---gggtccatgcttg 62
Query: 67 aagctctgtgtgcttactccctatctgtca 96
|||||||| ||||| |||| ||||||||||
Sbjct: 63 aagctctgcgtgctcactctctatctgtca 92
>39795_aly-MIR156f:mirbase
Length = 228
Score = 61.9 bits (31), Expect = 9e-11
Identities = 80/96 (83%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 9 ggtgacagaggagagtgagcactcatggttcttttcttgcat----gaagtttctatgct 64
||||||||| |||||||||||| |||||| |||||||||| || | || |||||
Sbjct: 66 ggtgacagaagagagtgagcacacatggtggctttcttgcatatttgatggtttcatgct 125
Query: 65 tgaagctctgtgtgcttactccctatctgtcacccc 100
||||||| |||||||| |||| ||||||||||||||
Sbjct: 126 tgaagctatgtgtgctcactctctatctgtcacccc 161
>40332_rco-MIR156c:mirbase
Length = 94
Score = 60.0 bits (30), Expect = 3e-10
Identities = 80/93 (86%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 8 aggtgacagaggagagtgagcactcatggttcttttcttgcatgaagtttctatgcttga 67
|||||||||| |||||||||||| |||||| | |||| |||||||| ||| ||||| ||
Sbjct: 3 aggtgacagaagagagtgagcacacatggtac-tttcctgcatgaa--ttc-atgctcga 58
Query: 68 agctctgtgtgcttactccctatctgtcacccc 100
||| || |||||||||| ||||||||||||||
Sbjct: 59 agccttgcgtgcttactctctatctgtcacccc 91
>40006_ath-MIR156e:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 60 atgcttgaagctctgtgtgcttactccctatctgtcacccct 101
|||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 66 atgcttgaagctatgtgtgcttactctctctctgtcacccct 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 8 aggtgacagaggagagtgagcactcatggt 37
|||||||||| |||||||||||| ||||||
Sbjct: 4 aggtgacagaagagagtgagcacacatggt 33
>39794_aly-MIR156e:mirbase
Length = 150
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 60 atgcttgaagctctgtgtgcttactccctatctgtcacccct 101
|||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 87 atgcttgaagctatgtgtgcttactctctctctgtcacccct 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 8 aggtgacagaggagagtgagcactcatggt 37
|||||||||| |||||||||||| ||||||
Sbjct: 23 aggtgacagaagagagtgagcacacatggt 52
>40650_mtr-MIR156c:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 81/95 (85%), Gaps = 5/95 (5%)
Strand = Plus / Plus
Query: 9 ggtgacagaggagagtgagcactcatggttcttttcttgcatgaa---gtttctatgctt 65
||||||||| |||||||||||| |||||| |||||||||| || ||||| |||||
Sbjct: 4 ggtgacagaagagagtgagcacacatggtg-ttttcttgcacgattatgtttcc-tgctt 61
Query: 66 gaagctctgtgtgcttactccctatctgtcacccc 100
|||||| | ||||||||||| ||||||||||||||
Sbjct: 62 gaagctatatgtgcttactctctatctgtcacccc 96
>42680_zma-MIR156c:mirbase
Length = 139
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 11 tgacagaggagagtgagcactcatggttcttttcttgcatga 52
||||||| |||||||||||| |||||| | ||||||||||||
Sbjct: 21 tgacagaagagagtgagcacacatggtgcctttcttgcatga 62
>42487_sbi-MIR156c:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 11 tgacagaggagagtgagcactcatggttcttttcttgcatga 52
||||||| |||||||||||| |||||| | ||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacatggtgcctttcttgcatga 42
>42467_ssp-MIR156:mirbase
Length = 543
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 11 tgacagaggagagtgagcactcatggttcttttcttgcatga 52
||||||| |||||||||||| |||||| | ||||||||||||
Sbjct: 5 tgacagaagagagtgagcacacatggtgcctttcttgcatga 46
>42451_sof-MIR156:mirbase
Length = 137
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 11 tgacagaggagagtgagcactcatggttcttttcttgcatga 52
||||||| |||||||||||| |||||| | ||||||||||||
Sbjct: 21 tgacagaagagagtgagcacacatggtgcctttcttgcatga 62
>41289_ptc-MIR156b:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 8e-08
Identities = 78/93 (83%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 8 aggtgacagaggagagtgagcactcatggttcttttcttgcatgaagtttctatgcttga 67
|||||||||| |||||||||||| || ||| | |||||||||||| || ||||||||
Sbjct: 8 aggtgacagaagagagtgagcacacagggtac-tttcttgcatga--catccatgcttga 64
Query: 68 agctctgtgtgcttactccctatctgtcacccc 100
| || || ||||| |||| ||||||||||||||
Sbjct: 65 aactttgcgtgctcactctctatctgtcacccc 97
>41083_tcc-MIR156d:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 3e-07
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 8 aggtgacagaggagagtgagcactcatggttcttttcttgcatga 52
|||||||||| |||||||||||| || ||||| ||||||||||||
Sbjct: 18 aggtgacagaagagagtgagcacacagggttc-tttcttgcatga 61
>41081_tcc-MIR156b:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 60 atgcttgaagctctgtgtgcttactccctatctgtca 96
||||||||||||||| ||||| |||| ||||||||||
Sbjct: 71 atgcttgaagctctgcgtgctcactctctatctgtca 107
>41291_ptc-MIR156d:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 75/90 (83%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 11 tgacagaggagagtgagcactcatggttcttttcttgcatgaagtttctatgcttgaagc 70
||||||| |||||||||||| || ||| |||| ||||||||| ||| |||||||||||
Sbjct: 11 tgacagaagagagtgagcacacagggtacttt-cttgcatgacgttc--atgcttgaagc 67
Query: 71 tctgtgtgcttactccctatctgtcacccc 100
| || |||| || | ||||||||||||||
Sbjct: 68 tttgcgtgcccaccctctatctgtcacccc 97
>41904_osa-MIR156a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 9 ggtgacagaggagagtgagcactcatggttcttttcttgcat 50
||||||||| |||||||||||| | ||||| ||| |||||||
Sbjct: 5 ggtgacagaagagagtgagcacacgtggttgtttccttgcat 46
>41906_osa-MIR156c:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 11 tgacagaggagagtgagcactcatggttcttttcttgcatg 51
||||||| |||||||||||| |||||| |||||||||||
Sbjct: 29 tgacagaagagagtgagcacacatggtgactttcttgcatg 69
>41043_ghr-MIR156b:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 60 atgcttgaagctctgtgtgcttactccctatctgtca 96
||||||||||||||| ||||| || | ||||||||||
Sbjct: 55 atgcttgaagctctgcgtgctcaccctctatctgtca 91
>41042_ghr-MIR156a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 60 atgcttgaagctctgtgtgcttactccctatctgtca 96
||||||||||||||| ||||| || | ||||||||||
Sbjct: 61 atgcttgaagctctgcgtgctcaccctctatctgtca 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 39/44 (88%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 8 aggtgacagaggagagtgagcactcatggttcttttcttgcatg 51
|||||||||| |||||||||||| || ||| | |||||||||||
Sbjct: 6 aggtgacagaagagagtgagcacacagggtac-tttcttgcatg 48
>40330_rco-MIR156a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 10 gtgacagaggagagtgagcactcatggtt 38
|||||||| |||||||||||| |||||||
Sbjct: 5 gtgacagaagagagtgagcacacatggtt 33
>40008_ath-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 12 gacagaggagagtgagcactcatggttctttt 43
|||||| |||||||||||| ||||| ||||||
Sbjct: 12 gacagaagagagtgagcacacatggctctttt 43
