miRNEST 2.0, an integrative microRNA resource :: BLAST
>41309_ptc-MIR160e:mirbase
Length = 100
Score = 131 bits (66), Expect = 1e-31
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttccta 69
|||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||
Sbjct: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttcta 69
Query: 70 tttggcatgaggggagtcaagcaggc 95
|||||||||||||||||| |||||||
Sbjct: 70 tttggcatgaggggagtcgagcaggc 95
>40341_rco-MIR160c:mirbase
Length = 94
Score = 125 bits (63), Expect = 7e-30
Identities = 81/87 (93%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttcct 68
||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||||
Sbjct: 4 tctgcctggctccctgaatgccatctaagaagcttgtcaaacagtgttggcaattttcct 63
Query: 69 atttggcatgaggggagtcaagcaggc 95
|||||||||||||||||||| ||||||
Sbjct: 64 atttggcatgaggggagtcatgcaggc 90
>41087_tcc-MIR160a:mirbase
Length = 122
Score = 119 bits (60), Expect = 4e-28
Identities = 84/92 (91%)
Strand = Plus / Plus
Query: 4 attgttctgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaacc 63
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||
Sbjct: 14 attgttctgcctggctccctgaatgccatctaagaagcttgtcaaagagtgttggctgcc 73
Query: 64 ttcctatttggcatgaggggagtcaagcaggc 95
||| || ||||||||||||||||| ||||||
Sbjct: 74 ttcttacatggcatgaggggagtcatgcaggc 105
>41310_ptc-MIR160f:mirbase
Length = 100
Score = 109 bits (55), Expect = 4e-25
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttcct 68
||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| ||
Sbjct: 9 tctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctctct 68
Query: 69 atttggcatgaggggagtcaagcaggc 95
| ||||||||||||||||| ||||||
Sbjct: 69 aactggcatgaggggagtcacgcaggc 95
>41165_aqc-MIR160a:mirbase
Length = 83
Score = 85.7 bits (43), Expect = 6e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttcctat 70
|||||||||||||| ||||||||||||||||||| | |||| |||||||| |||| |||
Sbjct: 1 tgcctggctccctggatgccatctaagaagcttg-tcaagaatgttgacaccctttctag 59
Query: 71 ttggcatgaggggagtcaagcag 93
||||||| |||||||||| ||||
Sbjct: 60 ttggcatcaggggagtcacgcag 82
>41573_vvi-MIR160a:mirbase
Length = 103
Score = 77.8 bits (39), Expect = 1e-15
Identities = 76/87 (87%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttcct 68
|||||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||
Sbjct: 9 tctgcctggctccctgaatgccatctaagaagcttg-tcaaggttgttgactctcttcct 67
Query: 69 atttggcatgaggggagtcaagcaggc 95
| ||||||| || ||||||| ||||||
Sbjct: 68 agttggcatcagaggagtcatgcaggc 94
>40660_mtr-MIR160c:mirbase
Length = 92
Score = 65.9 bits (33), Expect = 5e-12
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttcctat 70
|||||||||||||||||||||||| |||||||||| ||| | ||| ||||||| | ||
Sbjct: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaa-acgattggcaacctttccat 64
Query: 71 ttggcatgaggggagtcaagcaggc 95
||||||||| ||||| || ||||||
Sbjct: 65 ttggcatgaagggagccatgcaggc 89
>41735_bdi-MIR160e:mirbase
Length = 144
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatctaagaagc 41
||||||||||||||||||||||||| ||||||
Sbjct: 30 ctgcctggctccctgaatgccatctgagaagc 61
>40399_ahy-MIR160:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaag 37
|||||||||||||||||||||||| ||||
Sbjct: 19 tctgcctggctccctgaatgccatgtaag 47
>40398_ahy-MIR160:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaag 37
|||||||||||||||||||||||| ||||
Sbjct: 19 tctgcctggctccctgaatgccatgtaag 47
>41928_osa-MIR160f:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatc 33
>42501_sbi-MIR160f:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatc 33
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgaatgccatc 23
>41311_ptc-MIR160g:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaagaa 39
|||||||||||||||| |||||| |||||||
Sbjct: 9 tctgcctggctccctggatgccaactaagaa 39
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatct 34
|||||||||||||||| |||||||||
Sbjct: 9 tctgcctggctccctgtatgccatct 34
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatct 34
|||||||||||||||| |||||||||
Sbjct: 18 tctgcctggctccctgtatgccatct 43
>41089_tcc-MIR160c:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaag 37
|||||||||||||||| |||||| |||||
Sbjct: 19 tctgcctggctccctggatgccaactaag 47
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 62 ccttcctatttggcatgaggggagtcaagcagg 94
|||||||| ||||||| || |||||||||||||
Sbjct: 70 ccttcctagttggcatcagaggagtcaagcagg 102
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaagaagct 42
|||||||||||||| ||||||| || ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagct 37
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaagaagct 42
|||||||||||||| ||||||| || ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagct 37
>39732_smo-MIR160b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatctaagaagc 41
||||||||||||||| |||||| || ||||||
Sbjct: 12 ctgcctggctccctgtatgccacctgagaagc 43
