miRNEST 2.0, an integrative microRNA resource :: BLAST
>40448_gma-MIR168:mirbase
Length = 125
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 ggtctctaattcgcttggtgcaggtcgggaaccg 34
||||||||||||||||||||||||||||||||||
Sbjct: 9 ggtctctaattcgcttggtgcaggtcgggaaccg 42
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggag 127
|||||||||||||||||||||||||||||
Sbjct: 85 gatcccgccttgcatcaactgaatcggag 113
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggaga 128
||||||||||||||||||||||||||||||
Sbjct: 107 gatcccgccttgcatcaactgaatcggaga 136
>41215_crt-MIR168:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
||||||||||||||||||||||||||||||||
Sbjct: 11 ggtctctaattcgcttggtgcaggtcgggaac 42
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagac 129
|||||||||||||||||||||||||||||||
Sbjct: 140 gatcccgccttgcatcaactgaatcggagac 170
>41210_ccl-MIR168:mirbase
Length = 176
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
||||||||||||||||||||||||||||||||
Sbjct: 10 ggtctctaattcgcttggtgcaggtcgggaac 41
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagac 129
|||||||||||||||||||||||||||||||
Sbjct: 139 gatcccgccttgcatcaactgaatcggagac 169
>41101_tcc-MIR168:mirbase
Length = 167
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
||||||||||||||||||||||||||||||||
Sbjct: 11 ggtctctaattcgcttggtgcaggtcgggaac 42
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagac 129
|||||||||||||||||||||||||||||||
Sbjct: 124 gatcccgccttgcatcaactgaatcggagac 154
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggag 127
|||||||||||||||||||||||||||||
Sbjct: 131 gatcccgccttgcatcaactgaatcggag 159
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaac 32
>40043_ath-MIR168a:mirbase
Length = 138
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcgga 126
||||||||||||||||||||||||||||
Sbjct: 100 gatcccgccttgcatcaactgaatcgga 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 attcgcttggtgcaggtcgggaacc 33
|||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40
>39832_aly-MIR168a:mirbase
Length = 155
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcgga 126
||||||||||||||||||||||||||||
Sbjct: 106 gatcccgccttgcatcaactgaatcgga 133
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 attcgcttggtgcaggtcgggaacc 33
|||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaacc 46
>40355_rco-MIR168:mirbase
Length = 131
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 ctaattcgcttggtgcaggtcgggaac 32
|||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaac 27
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcg 124
||||||||||||||||||||||||||
Sbjct: 103 gatcccgccttgcatcaactgaatcg 128
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagacggc 132
|||||||||||||||||| |||||||||| ||||
Sbjct: 64 gatcccgccttgcatcaagtgaatcggagccggc 97
>40044_ath-MIR168b:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 attcgcttggtgcaggtcgggaac 32
||||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcgggaac 40
>39833_aly-MIR168b:mirbase
Length = 176
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 attcgcttggtgcaggtcgggaac 32
||||||||||||||||||||||||
Sbjct: 41 attcgcttggtgcaggtcgggaac 64
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggag 127
||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagacggc 132
|||||||||||||| ||| |||||||||| ||||
Sbjct: 64 gatcccgccttgcaccaagtgaatcggagccggc 97
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagacggc 132
|||||||||||||| ||| |||||||||| ||||
Sbjct: 61 gatcccgccttgcaccaagtgaatcggagccggc 94
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagacggc 132
|||||||||||||| ||| |||||||||| ||||
Sbjct: 63 gatcccgccttgcaccaagtgaatcggagccggc 96
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagacggc 132
|||||||||||||| ||| |||||||||| ||||
Sbjct: 64 gatcccgccttgcaccaagtgaatcggagccggc 97
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagacggc 132
|||||||||||||| ||| |||||||||| ||||
Sbjct: 67 gatcccgccttgcaccaagtgaatcggagccggc 100
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagacggc 132
|||||||||||||| ||| |||||||||| ||||
Sbjct: 67 gatcccgccttgcaccaagtgaatcggagccggc 100
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggagacggc 132
|||||||||||||| ||| |||||||||| ||||
Sbjct: 76 gatcccgccttgcaccaagtgaatcggagccggc 109
>40271_bna-MIR168:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tcgcttggtgcaggtcgggaac 32
||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39
>41962_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggag 127
|||||||||||||| ||| ||||||||||
Sbjct: 56 gatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 99 gatcccgccttgcatcaactgaatcggag 127
|||||||||||||| ||| ||||||||||
Sbjct: 56 gatcccgccttgcaccaagtgaatcggag 84
