miRNEST 2.0, an integrative microRNA resource :: BLAST
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 97.6 bits (49), Expect = 2e-21
Identities = 87/100 (87%), Gaps = 6/100 (6%)
Strand = Plus / Plus
Query: 3 aaagtaagcgatgttggtgaggttcaatccgaagacggatttacgaa------gagccgt 56
|||| |||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 10 aaagaaagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgt 69
Query: 57 aaagaacgatctctgattgagccgcgccaatatcactttc 96
||| |||||||| ||||||||||||||||||||||||||
Sbjct: 70 aaaatacgatctcagattgagccgcgccaatatcactttc 109
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 93.7 bits (47), Expect = 2e-20
Identities = 81/92 (88%), Gaps = 4/92 (4%)
Strand = Plus / Plus
Query: 8 aagcgatgttggtgaggttcaatccgaagacggatttac----gaagagccgtaaagaac 63
||||||||||||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 2 aagcgatgttggtgaggttcaatccgaagacggatttacatgtatagagttgtaaaatac 61
Query: 64 gatctctgattgagccgcgccaatatcacttt 95
|||||| |||||||||||||||||||||||||
Sbjct: 62 gatctcagattgagccgcgccaatatcacttt 93
>41541_sly-MIR171d:mirbase
Length = 112
Score = 91.7 bits (46), Expect = 9e-20
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 8 aagcgatgttggtgaggttcaatccgaagacggatttacgaagagc--cgtaaagaacga 65
|||||||||||||||||||||||||||||||| ||||| | | ||||||||||||
Sbjct: 8 aagcgatgttggtgaggttcaatccgaagacgaatttatgcttattttcgtaaagaacga 67
Query: 66 tctctgattgagccgcgccaatatcactt 94
|||| ||||||||||||||||||||||||
Sbjct: 68 tctcagattgagccgcgccaatatcactt 96
>40365_rco-MIR171g:mirbase
Length = 89
Score = 91.7 bits (46), Expect = 9e-20
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 9 agcgatgttggtgaggttcaatccgaagacggatttacgaa--gagccgtaaagaacgat 66
|||||||||||||||||||||||||||||||||||||| | | |||||| |||||
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacggatttacacattctgttgtaaaggacgat 60
Query: 67 ctctgattgagccgcgccaatatcacttt 95
||| |||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcacttt 89
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 81.8 bits (41), Expect = 9e-17
Identities = 87/101 (86%), Gaps = 6/101 (5%)
Strand = Plus / Plus
Query: 3 aaagtaagcgatgttggtgaggttcaatccgaagacggatttac----gaa--gagccgt 56
|||| ||||||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 2 aaagaaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgt 61
Query: 57 aaagaacgatctctgattgagccgcgccaatatcactttct 97
||| |||||||| |||||||||||||||||||||||||||
Sbjct: 62 aaaatacgatctcagattgagccgcgccaatatcactttct 102
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 75.8 bits (38), Expect = 6e-15
Identities = 83/96 (86%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 3 aaagtaagcgatgttggtgaggttcaatccgaagacggatttacgaagag---ccgtaaa 59
|||| ||||||||||||||||||||||||||||||| ||||||| | ||| |||||
Sbjct: 2 aaagaaagcgatgttggtgaggttcaatccgaagacagatttac-acgagtgaaagtaaa 60
Query: 60 gaacgatctctgattgagccgcgccaatatcacttt 95
||||||| |||||||||||||||||||||||||
Sbjct: 61 atccgatctcagattgagccgcgccaatatcacttt 96
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 64 gatctctgattgagccgcgccaatatcacttt 95
|||||| |||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatcacttt 95
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 71 gattgagccgcgccaatatcactttct 97
|||||||||||||||||||||||||||
Sbjct: 81 gattgagccgcgccaatatcactttct 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 gcgatgttggtgaggttcaatccgaaga 37
|||||||||||||||||||||| |||||
Sbjct: 19 gcgatgttggtgaggttcaatctgaaga 46
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 69 ctgattgagccgcgccaatatcactt 94
||||||||||||||||||||||||||
Sbjct: 82 ctgattgagccgcgccaatatcactt 107
>42774_zma-MIR171n:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatc 90
|||||||||||||||||||||||
Sbjct: 55 tctgattgagccgcgccaatatc 77
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 tctctgattgagccgcgccaatatcac 92
||||||||||||||| |||||||||||
Sbjct: 86 tctctgattgagccgtgccaatatcac 112
>42761_zma-MIR171a:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatc 90
|||||||||||||||||||||||
Sbjct: 77 tctgattgagccgcgccaatatc 99
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatc 90
|||||||||||||||||||||||
Sbjct: 55 tctgattgagccgcgccaatatc 77
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 tctctgattgagccgcgccaatatcac 92
||||||||||||||| |||||||||||
Sbjct: 89 tctctgattgagccgtgccaatatcac 115
>41981_osa-MIR171a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatc 90
|||||||||||||||||||||||
Sbjct: 65 tctgattgagccgcgccaatatc 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 agcgatgttggtgaggttcaatccga 34
|||||| |||||||||||||||||||
Sbjct: 7 agcgatattggtgaggttcaatccga 32
>41540_sly-MIR171c:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgcgccaatatcac 92
|||||||||||||||||||||||
Sbjct: 78 tgattgagccgcgccaatatcac 100
>41231_csi-MIR171a:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgcgccaatatcac 92
|||||||||||||||||||||||
Sbjct: 67 tgattgagccgcgccaatatcac 89
>41211_ccl-MIR171:mirbase
Length = 321
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgcgccaatatcac 92
|||||||||||||||||||||||
Sbjct: 122 tgattgagccgcgccaatatcac 144
>40322_bra-MIR171e:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatc 90
|||||||||||||||||||||||
Sbjct: 82 tctgattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatc 90
|||||||||||||||||||||||
Sbjct: 56 tctgattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatc 90
|||||||||||||||||||||||
Sbjct: 82 tctgattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatc 90
|||||||||||||||||||||||
Sbjct: 86 tctgattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatc 90
|||||||||||||||||||||||
Sbjct: 128 tctgattgagccgcgccaatatc 150
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gattgagccgcgccaatatcac 92
||||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatcac 86
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gattgagccgcgccaatatcac 92
||||||||||||||||||||||
Sbjct: 64 gattgagccgcgccaatatcac 85
>41986_osa-MIR171f:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 95 tctgattgagccgtgccaatatcac 119
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgcgccaatatc 90
|||||||||||||||||||||
Sbjct: 50 tgattgagccgcgccaatatc 70
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 69 tctgattgagccgtgccaatatcac 93
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 69 tctgattgagccgtgccaatatcac 93
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 66 tctctgattgagccgcgccaatatc 90
||||||||||||||| |||||||||
Sbjct: 97 tctctgattgagccgtgccaatatc 121
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 53 tctgattgagccgtgccaatatcac 77
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 73 tctgattgagccgtgccaatatcac 97
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 70 tgattgagccgcgccaatatc 90
|||||||||||||||||||||
Sbjct: 79 tgattgagccgcgccaatatc 99
>39739_smo-MIR171d:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 72 attgagccgcgccaatatcac 92
|||||||||||||||||||||
Sbjct: 71 attgagccgcgccaatatcac 91
>42640_tae-MIR171a:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ctctgattgagccgcgccaatatc 90
|||||||||||||| |||||||||
Sbjct: 86 ctctgattgagccgtgccaatatc 109
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatca 91
||||||||||||| ||||||||||
Sbjct: 67 tctgattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatca 91
||||||||||||| ||||||||||
Sbjct: 66 tctgattgagccgtgccaatatca 89
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 71 gattgagccgcgccaatatc 90
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
