miRNEST 2.0, an integrative microRNA resource :: BLAST
>41925_osa-MIR160c:mirbase
Length = 99
Score = 99.6 bits (50), Expect = 6e-22
Identities = 84/94 (89%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 28 atgtgcctggctccctgtatgccactcatctatagcaacattccttcctgatgaggttgc 87
|||||||||||||||||||||||||||||||| ||||||| | | || ||||||||
Sbjct: 4 atgtgcctggctccctgtatgccactcatctagagcaacaaacttctgcga-gaggttgc 62
Query: 88 ctaggatggatggcgtgcacggagccaagcatat 121
||| ||||||||||||||||||||||||||||||
Sbjct: 63 ctatgatggatggcgtgcacggagccaagcatat 96
>42677_ttu-MIR160:mirbase
Length = 100
Score = 79.8 bits (40), Expect = 5e-16
Identities = 83/96 (86%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 27 gatgtgcctggctccctgtatgccactcatctatagcaacattccttcctgatgaggttg 86
||||||||||||||||||||||||||||||| | ||||||| | || || ||||||
Sbjct: 5 gatgtgcctggctccctgtatgccactcatccagagcaaca-ccttttgcaataaggttg 63
Query: 87 cctaggatggatggcgtgcacggagccaagcatatc 122
||| ||||||||||||||||||| |||||||||||
Sbjct: 64 cctgcgatggatggcgtgcacggatccaagcatatc 99
>42703_zma-MIR160c:mirbase
Length = 100
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 26 ggatgtgcctggctccctgtatgccactcatctatagcaac 66
|||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2 ggatgtgcctggctccctgtatgccactcatctagagcaac 42
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 5e-10
Identities = 76/88 (86%), Gaps = 5/88 (5%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccactcatctatagcaacattccttcctgatgaggttgccta 90
||||||||||||||||||||||||||||| | ||||| || ||| || |||||||||
Sbjct: 1 tgcctggctccctgtatgccactcatctagatcaaca--actacct-at--ggttgccta 55
Query: 91 ggatggatggcgtgcacggagccaagca 118
||||| |||||||||||| ||||||||
Sbjct: 56 tgatggttggcgtgcacggtgccaagca 83
>42636_tae-MIR160:mirbase
Length = 148
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 24 tgggatgtgcctggctccctgtatgccactc 54
|||||| ||||||||||||||||||||||||
Sbjct: 15 tgggatatgcctggctccctgtatgccactc 45
>41924_osa-MIR160b:mirbase
Length = 139
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 30 gtgcctggctccctgtatgccactcat 56
|||||||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccactcat 55
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 24 tgggatgtgcctggctccctgtatgccactc 54
|||||| ||||||||||||||||||||||||
Sbjct: 25 tgggatatgcctggctccctgtatgccactc 55
>41926_osa-MIR160d:mirbase
Length = 142
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 25 gggatgtgcctggctccctgtatgccactc 54
||||| ||||||||||||||||||||||||
Sbjct: 2 gggatatgcctggctccctgtatgccactc 31
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 24 tgggatgtgcctggctccctgtatgccac 52
|||| ||||||||||||||||||||||||
Sbjct: 4 tgggttgtgcctggctccctgtatgccac 32
>42705_zma-MIR160e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccactc 54
||||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccactc 32
>42704_zma-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccactc 54
||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccactc 44
>42702_zma-MIR160b:mirbase
Length = 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgccac 52
||||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgccac 42
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccactc 54
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccactc 54
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>41923_osa-MIR160a:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgccac 52
||||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgccac 25
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgccac 52
||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccac 52
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 atgtgcctggctccctgtatgcca 51
||||||||||||||||||||||||
Sbjct: 8 atgtgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 atgtgcctggctccctgtatgcca 51
||||||||||||||||||||||||
Sbjct: 8 atgtgcctggctccctgtatgcca 31
>41219_csi-MIR160:mirbase
Length = 143
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 atgtgcctggctccctgtatgcca 51
||||||||||||||||||||||||
Sbjct: 30 atgtgcctggctccctgtatgcca 53
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 atgtgcctggctccctgtatgcca 51
||||||||||||||||||||||||
Sbjct: 3 atgtgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 atgtgcctggctccctgtatgcca 51
||||||||||||||||||||||||
Sbjct: 3 atgtgcctggctccctgtatgcca 26
>40436_gma-MIR160:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 atgtgcctggctccctgtatgcca 51
||||||||||||||||||||||||
Sbjct: 18 atgtgcctggctccctgtatgcca 41
>39374_pab-MIR160a:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgccac 52
||||||||||||||||||||||||
Sbjct: 12 tgtgcctggctccctgtatgccac 35
>42701_zma-MIR160a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 gtgcctggctccctgtatgccac 52
|||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgccac 31
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 gtgcctggctccctgtatgccac 52
|||||||||||||||||||||||
Sbjct: 30 gtgcctggctccctgtatgccac 52
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgcca 51
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40339_rco-MIR160a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgcca 51
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40020_ath-MIR160b:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 gtgcctggctccctgtatgccac 52
|||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccac 26
>39808_aly-MIR160b:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 gtgcctggctccctgtatgccac 52
|||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgccac 42
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccact 53
|||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccact 52
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgccac 23
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41927_osa-MIR160e:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 25 gggatgtgcctggctccctgtatgcc 50
||||| ||||||||||||||||||||
Sbjct: 5 gggatatgcctggctccctgtatgcc 30
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgccac 74
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>40658_mtr-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gtgcctggctccctgtatgcca 51
||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41
>40340_rco-MIR160b:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccac 27
>40021_ath-MIR160c:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgccac 45
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccac 52
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 42 tgcctggctccctgtatgcca 62
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 gcctggctccctgtatgccac 52
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
