miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41740_bdi-MIR164d:mirbase
Length = 186
Score = 369 bits (186), Expect = e-103
Identities = 186/186 (100%)
Strand = Plus / Plus
Query: 16 agcgagaaggaccgcgttggagaagcagggcacgtgcatgcatgcaactagagcttagct 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcgagaaggaccgcgttggagaagcagggcacgtgcatgcatgcaactagagcttagct 60
Query: 76 agtgtcaattcttccatctcttgtgcctggccgggatcgatcttatataccgagcttaat 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtgtcaattcttccatctcttgtgcctggccgggatcgatcttatataccgagcttaat 120
Query: 136 ttggcacctattggatgctgcatgcatgtgttcttctcctccatcacggtcttcatttct 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttggcacctattggatgctgcatgcatgtgttcttctcctccatcacggtcttcatttct 180
Query: 196 ctcgct 201
||||||
Sbjct: 181 ctcgct 186
>41931_osa-MIR164a:mirbase
Length = 156
Score = 79.8 bits (40), Expect = 8e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 19 gagaaggaccgcgttggagaagcagggcacgtgcatgcat 58
||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gagaaggaccgcgttggagaagcagggcacgtgcatgcat 42
>42712_zma-MIR164d:mirbase
Length = 216
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 19 gagaaggaccgcgttggagaagcagggcacgtgcatgca 57
|||||||||| || |||||||||||||||||||||||||
Sbjct: 6 gagaaggaccacgctggagaagcagggcacgtgcatgca 44
>42709_zma-MIR164a:mirbase
Length = 152
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 22 aaggaccgcgttggagaagcagggcacgtgcatgc 56
||||||| || ||||||||||||||||||||||||
Sbjct: 8 aaggaccacgctggagaagcagggcacgtgcatgc 42
>42506_sbi-MIR164d:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcatgc 56
||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcatgc 24
>40313_bra-MIR164a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 cgttggagaagcagggcacgtgca 53
||||||||||||||||||||||||
Sbjct: 7 cgttggagaagcagggcacgtgca 30
>40263_bna-MIR164:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 cgttggagaagcagggcacgtgca 53
||||||||||||||||||||||||
Sbjct: 4 cgttggagaagcagggcacgtgca 27
>42711_zma-MIR164c:mirbase
Length = 270
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 cgcgttggagaagcagggcacgtgcat 54
|||| ||||||||||||||||||||||
Sbjct: 13 cgcggtggagaagcagggcacgtgcat 39
>42507_sbi-MIR164e:mirbase
Length = 205
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 1 gttggagaagcagggcacgtgca 23
>41741_bdi-MIR164e:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 17 gttggagaagcagggcacgtgca 39
>41579_vvi-MIR164a:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 9 gttggagaagcagggcacgtgca 31
>41092_tcc-MIR164b:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 19 gttggagaagcagggcacgtgca 41
>41091_tcc-MIR164a:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 19 gttggagaagcagggcacgtgca 41
>41047_ghr-MIR164:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 17 gttggagaagcagggcacgtgca 39
>40666_mtr-MIR164c:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 4 gttggagaagcagggcacgtgca 26
>40664_mtr-MIR164a:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 4 gttggagaagcagggcacgtgca 26
>40438_gma-MIR164:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 9 gttggagaagcagggcacgtgca 31
>40027_ath-MIR164a:mirbase
Length = 113
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 17 gttggagaagcagggcacgtgca 39
>39816_aly-MIR164a:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gttggagaagcagggcacgtgca 53
|||||||||||||||||||||||
Sbjct: 1 gttggagaagcagggcacgtgca 23
>42715_zma-MIR164g:mirbase
Length = 171
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 ttggagaagcagggcacgtgca 53
||||||||||||||||||||||
Sbjct: 1 ttggagaagcagggcacgtgca 22
>42710_zma-MIR164b:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgcat 42
>42637_tae-MIR164:mirbase
Length = 156
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgcat 24
>42503_sbi-MIR164:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcat 22
>41936_osa-MIR164f:mirbase
Length = 210
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgcat 45
>41932_osa-MIR164b:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 9 tggagaagcagggcacgtgcat 30
>41742_bdi-MIR164f:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 144 tggagaagcagggcacgtgcat 123
>41737_bdi-MIR164a:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 31 tggagaagcagggcacgtgcat 52
>41581_vvi-MIR164c:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcat 32
>41320_ptc-MIR164e:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcat 32
>41278_ctr-MIR164:mirbase
Length = 297
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 22 tggagaagcagggcacgtgcat 43
>41221_csi-MIR164:mirbase
Length = 278
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 14 tggagaagcagggcacgtgcat 35
>40345_rco-MIR164c:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcat 27
>40028_ath-MIR164b:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgcat 24
>39817_aly-MIR164b:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgcat 54
||||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgcat 24
>41582_vvi-MIR164d:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgca 53
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41319_ptc-MIR164d:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgca 53
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41318_ptc-MIR164c:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgca 53
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41317_ptc-MIR164b:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgca 53
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41316_ptc-MIR164a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgca 53
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>40665_mtr-MIR164b:mirbase
Length = 144
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgca 53
|||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgca 26
>40344_rco-MIR164b:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgca 53
|||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgca 26
>40343_rco-MIR164a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgca 53
|||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgca 26
>42714_zma-MIR164f:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgc 52
||||||||||||||||||||
Sbjct: 2 tggagaagcagggcacgtgc 21
>42504_sbi-MIR164b:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgc 52
||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40
>41934_osa-MIR164d:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgc 52
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>41739_bdi-MIR164c:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgc 52
||||||||||||||||||||
Sbjct: 34 tggagaagcagggcacgtgc 53
>40029_ath-MIR164c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgc 52
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>39818_aly-MIR164c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 tggagaagcagggcacgtgc 52
||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgc 37
