miRNEST 2.0, an integrative microRNA resource :: BLAST
>42641_tae-MIR171b:mirbase
Length = 138
Score = 95.6 bits (48), Expect = 5e-21
Identities = 79/87 (90%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 1 cgcggtattggtgcggttcaatcagaaagctggcgctcc-ggacgcaaaaggggttcctc 59
|||||||||||||||||||||||||| ||||||||| || ||| || ||||||||||||
Sbjct: 27 cgcggtattggtgcggttcaatcagagagctggcgccccaggaggc--aaggggttcctc 84
Query: 60 tctttgattgagccgtgccaatatcac 86
||| ||||||||||||||||||||||
Sbjct: 85 ccttcgattgagccgtgccaatatcac 111
>41983_osa-MIR171c:mirbase
Length = 99
Score = 83.8 bits (42), Expect = 2e-17
Identities = 72/81 (88%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaagctggcgctccggacgcaaaaggggttcctctctttg 65
|||||||||||||||||||||||||| | |||||| | || | |||| ||| |||||||
Sbjct: 13 tattggtgcggttcaatcagaaagcttgtgctccgaaggcga--ggggctccactctttg 70
Query: 66 attgagccgtgccaatatcac 86
|||||||||||||||||||||
Sbjct: 71 attgagccgtgccaatatcac 91
>42762_zma-MIR171b:mirbase
Length = 85
Score = 75.8 bits (38), Expect = 4e-15
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaagctggcgctccggacgcaaaaggggttcctctctttg 65
|||||| ||||||||||||||||||| ||||||| | | | | |||| ||| |||||||
Sbjct: 6 tattggcgcggttcaatcagaaagcttgcgctccaggcccga--ggggctccactctttg 63
Query: 66 attgagccgtgccaatatcac 86
|||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcac 84
>42763_zma-MIR171c:mirbase
Length = 118
Score = 67.9 bits (34), Expect = 1e-12
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaagctggcgctccggacgcaaaaggggttcctctctttg 65
|||||||||||||||||||||||||| ||||||| | | ||||| ||| |||||||
Sbjct: 23 tattggtgcggttcaatcagaaagcttgcgctccaaagcc--caggggctccactctttg 80
Query: 66 attgagccgtgccaatatcac 86
| |||||||||||||||||||
Sbjct: 81 actgagccgtgccaatatcac 101
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaagctggcgctccggacgcaaaaggggttcctctctttg 65
|||||| ||||||||||||||||||| ||||||| | | | |||| ||| |||||||
Sbjct: 6 tattggcgcggttcaatcagaaagcttgcgctccaaagccca--ggggctccactctttg 63
Query: 66 attgagccgtgccaatatcac 86
|||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcac 84
>41982_osa-MIR171b:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 70/82 (85%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaagctggcgctccggacgcaaaaggggttcctctc-ttt 64
|||||| ||||||||||||||||||| | |||||||| || ||| | || ||| |||
Sbjct: 13 tattggggcggttcaatcagaaagcttgtgctccggaagc--gaggagctctactctttt 70
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatcac 144
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcac 89
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatcac 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaagc 30
||||||||||||||||| |||||||
Sbjct: 14 tattggtgcggttcaataagaaagc 38
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatcac 93
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcaga 26
|||||||||||||||||||||
Sbjct: 16 tattggtgcggttcaatcaga 36
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatcac 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaag 29
||||||| ||||||||||||||||
Sbjct: 16 tattggtacggttcaatcagaaag 39
>41216_crt-MIR171:mirbase
Length = 201
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatcac 183
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaa 28
||||||||||||||||| |||||
Sbjct: 106 tattggtgcggttcaataagaaa 128
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatcac 99
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatcac 99
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcac 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaa 27
||||||||||||||||||||||
Sbjct: 8 tattggtgcggttcaatcagaa 29
>40457_gma-MIR171c:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatcac 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaa 27
||||||||||||||||||||||
Sbjct: 15 tattggtgcggttcaatcagaa 36
>40360_rco-MIR171b:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcac 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcaga 26
|||||||||||||||||||||
Sbjct: 9 tattggtgcggttcaatcaga 29
>40359_rco-MIR171a:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatcac 86
>40318_bra-MIR171a:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaa 28
|||||||| ||||||||||||||
Sbjct: 6 tattggtgtggttcaatcagaaa 28
>40305_bol-MIR171a:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcac 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaa 28
|||||||||||||||||||||||
Sbjct: 12 tattggtgcggttcaatcagaaa 34
>40289_bna-MIR171e:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcac 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaa 28
|||||||| ||||||||||||||
Sbjct: 11 tattggtgtggttcaatcagaaa 33
>40288_bna-MIR171d:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcac 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaa 28
|||||||||||||||||||||||
Sbjct: 12 tattggtgcggttcaatcagaaa 34
>40062_ath-MIR171c:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatcac 109
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaa 28
|||||||||||||||||||||||
Sbjct: 31 tattggtgcggttcaatcagaaa 53
>39851_aly-MIR171c:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatcac 86
|||||||||||||||||||||||||
Sbjct: 72 tttgattgagccgtgccaatatcac 96
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tattggtgcggttcaatcagaaa 28
|||||||||||||||||||||||
Sbjct: 18 tattggtgcggttcaatcagaaa 40
>42770_zma-MIR171j:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 59 ctctttgattgagccgtgccaatatcac 86
|||| |||||||||||||||||||||||
Sbjct: 85 ctctctgattgagccgtgccaatatcac 112
>42769_zma-MIR171i:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 ttgattgagccgtgccaatatcac 86
||||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatcac 87
>42766_zma-MIR171f:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 ttgattgagccgtgccaatatcac 86
||||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatcac 137
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 59 ctctttgattgagccgtgccaatatcac 86
|||| |||||||||||||||||||||||
Sbjct: 88 ctctctgattgagccgtgccaatatcac 115
>40362_rco-MIR171d:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 ctttgattgagccgtgccaatatc 84
||||||||||||||||||||||||
Sbjct: 96 ctttgattgagccgtgccaatatc 119
>41986_osa-MIR171f:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatcac 86
|||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatcac 119
>41538_sly-MIR171a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatcac 86
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatcac 86
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatatc 1
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatcac 86
|||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatcac 77
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatcac 86
|||||||||||||||||||||||
Sbjct: 75 tgattgagccgtgccaatatcac 97
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatatc 84
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatca 85
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 tgattgagccgtgccaatatca 85
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 tttgattgagccgtgccaatat 83
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>40321_bra-MIR171d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40320_bra-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40319_bra-MIR171b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40287_bna-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40286_bna-MIR171b:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40285_bna-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40061_ath-MIR171b:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcac 97
>39850_aly-MIR171b:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 87 gattgagccgtgccaatatcac 108
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
