miRNEST 2.0, an integrative microRNA resource :: BLAST
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 67.9 bits (34), Expect = 3e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 16 agtccatgccattcctttccacagctttcttgaacttc 53
|||||||||||| |||||||||||||||||||||||||
Sbjct: 5 agtccatgccatgcctttccacagctttcttgaacttc 42
Score = 60.0 bits (30), Expect = 7e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 143 ggtcaagaaagctgtgggaagaaatggcataaccagga 180
|||||||||||||||||||||||||| |||||| ||||
Sbjct: 125 ggtcaagaaagctgtgggaagaaatgacataacaagga 162
>42028_osa-MIR396c:mirbase
Length = 141
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 135 aagaggagggtcaagaaagctgtgggaagaaatggca 171
|||| ||||||||||||||||||||||||||||||||
Sbjct: 105 aagaagagggtcaagaaagctgtgggaagaaatggca 141
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 22 tgccattcctttccacagctttcttgaacttc 53
|||||| |||||||||||||||||||||||||
Sbjct: 1 tgccatgcctttccacagctttcttgaacttc 32
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 22 tgccattcctttccacagctttcttgaacttc 53
|||||| | |||||||||||||||||||||||
Sbjct: 4 tgccatgcttttccacagctttcttgaacttc 35
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 34 ccacagctttcttgaacttc 53
||||||||||||||||||||
Sbjct: 95 ccacagctttcttgaacttc 76
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttcc 54
||||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaacttcc 33
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttcc 54
||||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaacttcc 33
>41212_ccl-MIR396:mirbase
Length = 277
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttcc 54
||||||||||||||||||||||||
Sbjct: 142 tttccacagctttcttgaacttcc 165
>42812_zma-MIR396f:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaacttc 23
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 134 gaagaggagggtcaagaaagctgtgggaaga 164
||||| || ||||||||||||||||||||||
Sbjct: 87 gaagacgaaggtcaagaaagctgtgggaaga 117
>42811_zma-MIR396e:mirbase
Length = 166
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaacttc 23
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaacttc 32
>41243_csi-MIR396c:mirbase
Length = 178
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 12 tttccacagctttcttgaacttc 34
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 145 tcaagaaagctgtgggaagaaatggca 171
|||||||| ||||||||||||||||||
Sbjct: 150 tcaagaaatctgtgggaagaaatggca 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 22 tgccattcctttccacagctttcttgaacttc 53
||||||| ||| |||||| |||||||||||||
Sbjct: 176 tgccatttcttcccacagatttcttgaacttc 145
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 5 tttccacagctttcttgaacttc 27
>40476_gma-MIR396d:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaacttc 32
>40475_gma-MIR396c:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaacttc 42
>40474_gma-MIR396b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaacttc 42
>40379_rco-MIR396:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 5 tttccacagctttcttgaacttc 27
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaacttc 53
||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttc 42
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaactt 52
||||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaactt 41
>40086_ath-MIR396b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaactt 52
||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaactt 31
>39878_aly-MIR396b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaactt 52
||||||||||||||||||||||
Sbjct: 31 tttccacagctttcttgaactt 52
>39426_pta-MIR396:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaactt 52
||||||||||||||||||||||
Sbjct: 16 tttccacagctttcttgaactt 37
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaact 51
|||||||||||||||||||||
Sbjct: 13 tttccacagctttcttgaact 33
>41242_csi-MIR396b:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaact 51
|||||||||||||||||||||
Sbjct: 19 tttccacagctttcttgaact 39
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaactt 52
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaact 51
|||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaact 40
>40296_bna-MIR396a:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaactt 52
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>39381_pab-MIR396c:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttccc 55
||||||| |||||||||||||||||
Sbjct: 24 tttccacggctttcttgaacttccc 48
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41241_csi-MIR396a:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaact 26
>40473_gma-MIR396a:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40085_ath-MIR396a:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43
>39741_smo-MIR396:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 34 ccacagctttcttgaacttc 53
||||||||||||||||||||
Sbjct: 153 ccacagctttcttgaacttc 134
>39379_pab-MIR396a:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
