miRNEST 2.0, an integrative microRNA resource :: BLAST
>41797_bdi-MIR397a:mirbase
Length = 124
Score = 246 bits (124), Expect = 8e-66
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 15 gaagaggcgcaaaggcatcattgagtgcagcgttgatgaacaggggccaggcgaccggcg 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagaggcgcaaaggcatcattgagtgcagcgttgatgaacaggggccaggcgaccggcg 60
Query: 75 gccggtccggttcggttcaccggcgctgcacacagtgacgcccttgcattctctggcccg 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccggtccggttcggttcaccggcgctgcacacagtgacgcccttgcattctctggcccg 120
Query: 135 attc 138
||||
Sbjct: 121 attc 124
Score = 246 bits (124), Expect = 8e-66
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 161 gaagaggcgcaaaggcatcattgagtgcagcgttgatgaacaggggccaggcgaccggcg 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagaggcgcaaaggcatcattgagtgcagcgttgatgaacaggggccaggcgaccggcg 60
Query: 221 gccggtccggttcggttcaccggcgctgcacacagtgacgcccttgcattctctggcccg 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccggtccggttcggttcaccggcgctgcacacagtgacgcccttgcattctctggcccg 120
Query: 281 attc 284
||||
Sbjct: 121 attc 124
>42037_osa-MIR397a:mirbase
Length = 114
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 24 caaaggcatcattgagtgcagcgttgatgaaca 56
|||| ||||||||||||||||||||||||||||
Sbjct: 3 caaatgcatcattgagtgcagcgttgatgaaca 35
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 170 caaaggcatcattgagtgcagcgttgatgaaca 202
|||| ||||||||||||||||||||||||||||
Sbjct: 3 caaatgcatcattgagtgcagcgttgatgaaca 35
>42038_osa-MIR397b:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 26 aaggcatcattgagtgcagcgttgatgaac 55
||||||| ||||||||||||||||||||||
Sbjct: 5 aaggcattattgagtgcagcgttgatgaac 34
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 172 aaggcatcattgagtgcagcgttgatgaac 201
||||||| ||||||||||||||||||||||
Sbjct: 5 aaggcattattgagtgcagcgttgatgaac 34
>41664_vvi-MIR397a:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttgatgaa 54
|||||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatgaa 33
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttgatgaa 200
|||||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatgaa 33
>41442_ptc-MIR397a:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttgatgaa 54
|||||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatgaa 33
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttgatgaa 200
|||||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatgaa 33
>41244_csi-MIR397:mirbase
Length = 156
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttgatgaa 54
|||||||||||||||||||||||||
Sbjct: 16 catcattgagtgcagcgttgatgaa 40
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttgatgaa 200
|||||||||||||||||||||||||
Sbjct: 16 catcattgagtgcagcgttgatgaa 40
>41143_tcc-MIR397:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttgatgaa 54
|||||||||||||||||||||||||
Sbjct: 19 catcattgagtgcagcgttgatgaa 43
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttgatgaa 200
|||||||||||||||||||||||||
Sbjct: 19 catcattgagtgcagcgttgatgaa 43
>40380_rco-MIR397:mirbase
Length = 157
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttgatgaa 54
|||||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatgaa 28
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttgatgaa 200
|||||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatgaa 28
>40298_bna-MIR397b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttgatg 52
|||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatg 26
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttgatg 198
|||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatg 26
>40297_bna-MIR397a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttgatg 52
|||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatg 26
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttgatg 198
|||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatg 26
>40087_ath-MIR397a:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttgatg 52
|||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatg 31
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttgatg 198
|||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatg 31
>39880_aly-MIR397b:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttgatg 52
|||||||||||||||||||||||
Sbjct: 17 catcattgagtgcagcgttgatg 39
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttgatg 198
|||||||||||||||||||||||
Sbjct: 17 catcattgagtgcagcgttgatg 39
>39879_aly-MIR397a:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttgatg 52
|||||||||||||||||||||||
Sbjct: 18 catcattgagtgcagcgttgatg 40
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttgatg 198
|||||||||||||||||||||||
Sbjct: 18 catcattgagtgcagcgttgatg 40
>42587_sbi-MIR397:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tcattgagtgcagcgttgatga 53
||||||||||||||||||||||
Sbjct: 1 tcattgagtgcagcgttgatga 22
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 178 tcattgagtgcagcgttgatga 199
||||||||||||||||||||||
Sbjct: 1 tcattgagtgcagcgttgatga 22
>41891_hvu-MIR397:mirbase
Length = 113
Score = 44.1 bits (22), Expect = 6e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 cggttcaccggcgctgcacacagtgacgcc 116
||||||||||||||||||| || |||||||
Sbjct: 74 cggttcaccggcgctgcacgcaatgacgcc 103
Score = 44.1 bits (22), Expect = 6e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 233 cggttcaccggcgctgcacacagtgacgcc 262
||||||||||||||||||| || |||||||
Sbjct: 74 cggttcaccggcgctgcacgcaatgacgcc 103
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 35 ttgagtgcagcgttgatgaac 55
|||||||||||||||||||||
Sbjct: 14 ttgagtgcagcgttgatgaac 34
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 181 ttgagtgcagcgttgatgaac 201
|||||||||||||||||||||
Sbjct: 14 ttgagtgcagcgttgatgaac 34
>41443_ptc-MIR397b:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 cattgagtgcagcgttgatgaa 54
||||||||||||||||||||||
Sbjct: 12 cattgagtgcagcgttgatgaa 33
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 179 cattgagtgcagcgttgatgaa 200
||||||||||||||||||||||
Sbjct: 12 cattgagtgcagcgttgatgaa 33
>39382_pab-MIR397:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 catcattgagtgcagcgttga 50
|||||||||||||||||||||
Sbjct: 15 catcattgagtgcagcgttga 35
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 176 catcattgagtgcagcgttga 196
|||||||||||||||||||||
Sbjct: 15 catcattgagtgcagcgttga 35
>41547_sly-MIR397:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 34 attgagtgcagcgttgatga 53
||||||||||||||||||||
Sbjct: 20 attgagtgcagcgttgatga 39
Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 attgagtgcagcgttgatga 199
||||||||||||||||||||
Sbjct: 20 attgagtgcagcgttgatga 39
