miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42624_sbi-MIR529:mirbase
          Length = 116

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 14 gggagaagagagagagtacagcctta 39
          ||||||||||||||||||||||||||
Sbjct: 1  gggagaagagagagagtacagcctta 26



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 68  aaggctgtaccctctctcttcttct 92
           |||||||||||||||||||||||||
Sbjct: 92  aaggctgtaccctctctcttcttct 116




>42104_osa-MIR529b:mirbase
          Length = 138

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 67  caaggctgtaccctctctcttcttctcttagctt 100
           ||||||||||| ||| ||||||||||||||||||
Sbjct: 97  caaggctgtacgctccctcttcttctcttagctt 130



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 5  aaggttaaagggagaagagagagagtacagc 35
          |||| |||| |||||||||||||||||||||
Sbjct: 7  aaggctaaatggagaagagagagagtacagc 37




>42834_zma-MIR529:mirbase
          Length = 126

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 68  aaggctgtaccctctctcttcttct 92
           |||||||||||||||||||||||||
Sbjct: 102 aaggctgtaccctctctcttcttct 126



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 16 gagaagagagagagtacagcctt 38
          |||||||||||||||||||||||
Sbjct: 1  gagaagagagagagtacagcctt 23




>42103_osa-MIR529a:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 68 aaggctgtaccctctctcttcttc 91
          ||||||||||||||||||||||||
Sbjct: 76 aaggctgtaccctctctcttcttc 99



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 17 agaagagagagagtacagcctta 39
          |||||||||||||||||||||||
Sbjct: 3  agaagagagagagtacagcctta 25



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 68 aaggctgtaccctctctcttcttc 91
          |||||||||| |||||||||||||
Sbjct: 24 aaggctgtactctctctcttcttc 1




>39508_ppt-MIR529f:mirbase
          Length = 122

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 17 agaagagagagagtacagcc 36
          ||||||||||||||||||||
Sbjct: 30 agaagagagagagtacagcc 49




>39507_ppt-MIR529e:mirbase
          Length = 122

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 17 agaagagagagagtacagcc 36
          ||||||||||||||||||||
Sbjct: 30 agaagagagagagtacagcc 49