miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41853_bdi-MIR5181a:mirbase
          Length = 141

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 35  gatccataataagtgtcggggatttagtaca 65
           ||||||||||||||| |||||||||||||||
Sbjct: 103 gatccataataagtgccggggatttagtaca 73



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 35 gatccataataagtgtcggggatttagtaca 65
          ||||||||||||||||| || ||||||||||
Sbjct: 33 gatccataataagtgtcaggaatttagtaca 63




>41865_bdi-MIR5203:mirbase
          Length = 67

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 103 atttattatggatcggagggagta 126
           |||||||||||| |||||||||||
Sbjct: 25  atttattatggaccggagggagta 2