miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41859_bdi-MIR5185b:mirbase
Length = 153
Score = 196 bits (99), Expect = 3e-51
Identities = 117/123 (95%)
Strand = Plus / Plus
Query: 19 cgaaagtcccgtttctagttcatttttcaaatcttctattcaaaattttgctcaaaattt 78
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 20 cgaaagtcccgcttctagttcatttttcaaatcttctattcaaaattttgctcataattt 79
Query: 79 gaataggagatttgagaattgaactagaagcgggactttcgcgggatgccgtttgcaccc 138
||||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 80 gaataagaggtttgagaattgaactagaagcgggacttttgcgggatcccgtttgcaccc 139
Query: 139 tta 141
|||
Sbjct: 140 tta 142
Score = 91.7 bits (46), Expect = 1e-19
Identities = 105/122 (86%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 1 ggtgcaaactggatcccacgaaagtcccgtttctagttcatttttcaaatcttctattca 60
||||||||| ||||||| | ||||||||| |||||||||| || ||||| || ||||||
Sbjct: 138 ggtgcaaacgggatcccgcaaaagtcccgcttctagttcaattctcaaacctcttattca 79
Query: 61 aaattttgctcaaaattt-gaataggagatttgagaattgaactagaagcgggactttcg 119
|| || || |||||||| |||||| |||||||| || ||||||||||||||||||||||
Sbjct: 78 aa-ttatgagcaaaattttgaatagaagatttgaaaaatgaactagaagcgggactttcg 20
Query: 120 cg 121
||
Sbjct: 19 cg 18
