miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41858_bdi-MIR5185a:mirbase
Length = 153
Score = 196 bits (99), Expect = 3e-51
Identities = 117/123 (95%)
Strand = Plus / Plus
Query: 20 cgaaagtcccgcttctagttcatttttcaaatcttctattcaaaattttgctcataattt 79
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 19 cgaaagtcccgtttctagttcatttttcaaatcttctattcaaaattttgctcaaaattt 78
Query: 80 gaataagaggtttgagaattgaactagaagcgggacttttgcgggatcccgtttgcaccc 139
||||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 79 gaataggagatttgagaattgaactagaagcgggactttcgcgggatgccgtttgcaccc 138
Query: 140 tta 142
|||
Sbjct: 139 tta 141
Score = 91.7 bits (46), Expect = 1e-19
Identities = 105/122 (86%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 18 cgcgaaagtcccgcttctagttcatttttcaaatcttctattcaaaattttgctcataa- 76
|||||||||||||||||||||||| || |||||||| |||||| |||||||| || ||
Sbjct: 121 cgcgaaagtcccgcttctagttcaattctcaaatctcctattc-aaattttgagcaaaat 63
Query: 77 tttgaataagaggtttgagaattgaactagaagcgggacttttgcgggatcccgtttgca 136
|||||||| || ||||| || |||||||||| ||||||||| | ||||||| |||||||
Sbjct: 62 tttgaatagaagatttgaaaaatgaactagaaacgggactttcgtgggatccagtttgca 3
Query: 137 cc 138
||
Sbjct: 2 cc 1
