miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41866_far-MIR156a:mirbase
Length = 180
Score = 357 bits (180), Expect = 2e-99
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 gcagaccgatggtcgtggctggcaccgtgggtggtggtatcccatggctgagttgacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagaccgatggtcgtggctggcaccgtgggtggtggtatcccatggctgagttgacaga 60
Query: 61 agagagagagcacagctggagtcggtggcgacccctgtgagacacccgcctggagggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagagagagcacagctggagtcggtggcgacccctgtgagacacccgcctggagggagc 120
Query: 121 tctggaccggggaagccgtggctgccatatgcatgtgggccataacccgtgtgaggacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctggaccggggaagccgtggctgccatatgcatgtgggccataacccgtgtgaggacgc 180
>41877_far-MIR529:mirbase
Length = 120
Score = 194 bits (98), Expect = 2e-50
Identities = 115/120 (95%), Gaps = 3/120 (2%)
Strand = Plus / Plus
Query: 10 tggtcgtggctggcaccgtgggtggtggtatcccatggctgagt---tgacagaagagag 66
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 tggtcgtggctggcaccgtgggtggtggtatcccatggctgagtacttgacagaagagag 60
Query: 67 agagcacagctggagtcggtggcgacccctgtgagacacccgcctggagggagctctgga 126
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagcacagcttgagtcggcggcgacccctgtgagacacccgcctggagggagctctgga 120
>41726_bdi-MIR156:mirbase
Length = 147
Score = 93.7 bits (47), Expect = 4e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 39 atcccatggctgagttgacagaagagagagagcacagctggagtcgg 85
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atcccatggctgagttgacagaagagagagagcacagctggagtcgg 132
>41204_aqc-MIR529:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcaca 74
|||||||||||||||||||||||
Sbjct: 16 gttgacagaagagagagagcaca 38
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcaca 74
|||||||||||||||||||||||
Sbjct: 19 gttgacagaagagagagagcaca 41
>40430_gma-MIR156f:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcaca 74
|||||||||||||||||||||||
Sbjct: 10 gttgacagaagagagagagcaca 32
>40426_gma-MIR156b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcaca 74
|||||||||||||||||||||||
Sbjct: 19 gttgacagaagagagagagcaca 41
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcaca 74
|||||||||||||||||||||||
Sbjct: 20 gttgacagaagagagagagcaca 42
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcaca 74
|||||||||||||||||||||||
Sbjct: 16 gttgacagaagagagagagcaca 38
>40334_rco-MIR156e:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcaca 74
|||||||||||||||||||||||
Sbjct: 4 gttgacagaagagagagagcaca 26
>41291_ptc-MIR156d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 49 tgagttgacagaagagagagagcaca 74
|||||||||||||||||| |||||||
Sbjct: 6 tgagttgacagaagagagtgagcaca 31
>42687_zma-MIR156j:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tgacagaagagagagagcaca 74
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tgacagaagagagagagcaca 74
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>41914_osa-MIR156k:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tgacagaagagagagagcaca 74
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcaca 31
>40648_mtr-MIR156:mirbase
Length = 460
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tgacagaagagagagagcaca 74
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>39452_ppt-MIR156a:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 54 tgacagaagagagagagcacagctg 78
||||||||||||| |||||||||||
Sbjct: 21 tgacagaagagagtgagcacagctg 45
>41909_osa-MIR156f:mirbase
Length = 186
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 agttgacagaagagagagagcaca 74
|||||||||||||||| |||||||
Sbjct: 1 agttgacagaagagagtgagcaca 24
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 10 gttgacagaagatagagagcacag 33
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 10 gttgacagaagatagagagcacag 33
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 10 gttgacagaagatagagagcacag 33
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 10 gttgacagaagatagagagcacag 33
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 10 gttgacagaagatagagagcacag 33
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 20 gttgacagaagatagagagcacag 43
>41077_gra-MIR157b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 4 gttgacagaagatagagagcacag 27
>41076_gra-MIR157a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 4 gttgacagaagatagagagcacag 27
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 5 gttgacagaagatagagagcacag 28
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 5 gttgacagaagatagagagcacag 28
>40431_gma-MIR156g:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 23 gttgacagaagatagagagcacag 46
>40428_gma-MIR156d:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 20 gttgacagaagatagagagcacag 43
>40337_rco-MIR156h:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 5 gttgacagaagatagagagcacag 28
>40011_ath-MIR157b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 18 gttgacagaagatagagagcacag 41
>40010_ath-MIR157a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 3 gttgacagaagatagagagcacag 26
>40005_ath-MIR156d:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 agttgacagaagagagagagcaca 74
|||||||||||||||| |||||||
Sbjct: 15 agttgacagaagagagtgagcaca 38
>39799_aly-MIR157b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 3 gttgacagaagatagagagcacag 26
>39798_aly-MIR157a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 gttgacagaagagagagagcacag 75
|||||||||||| |||||||||||
Sbjct: 15 gttgacagaagatagagagcacag 38
>39793_aly-MIR156d:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 agttgacagaagagagagagcaca 74
|||||||||||||||| |||||||
Sbjct: 14 agttgacagaagagagtgagcaca 37
>39507_ppt-MIR529e:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 57 cagaagagagagagcacagc 76
||||||||||||||||||||
Sbjct: 95 cagaagagagagagcacagc 76
>39506_ppt-MIR529d:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 cagaagagagagagcacagc 76
||||||||||||||||||||
Sbjct: 36 cagaagagagagagcacagc 55
