miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41110_tcc-MIR169i:mirbase
          Length = 115

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 18 agccaaggatgagttgcctg 37
          ||||||||||||||||||||
Sbjct: 22 agccaaggatgagttgcctg 41





>40058_ath-MIR169n:mirbase
          Length = 215

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 18 agccaaggatgagttgcctgatc 40
          |||||||||||| ||||||||||
Sbjct: 46 agccaaggatgacttgcctgatc 68





>40056_ath-MIR169l:mirbase
          Length = 211

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 18 agccaaggatgagttgcctgatc 40
          |||||||||||| ||||||||||
Sbjct: 45 agccaaggatgacttgcctgatc 67





>40054_ath-MIR169j:mirbase
          Length = 221

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 18 agccaaggatgagttgcctgatc 40
          |||||||||||| ||||||||||
Sbjct: 52 agccaaggatgacttgcctgatc 74





>39845_aly-MIR169l:mirbase
          Length = 272

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 18 agccaaggatgagttgcctgatc 40
          |||||||||||| ||||||||||
Sbjct: 60 agccaaggatgacttgcctgatc 82





>39843_aly-MIR169j:mirbase
          Length = 300

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 18  agccaaggatgagttgcctgatc 40
           |||||||||||| ||||||||||
Sbjct: 81  agccaaggatgacttgcctgatc 103