miRNEST 2.0, an integrative microRNA resource :: BLAST
>39795_aly-MIR156f:mirbase
Length = 228
Score = 99.6 bits (50), Expect = 6e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatgctgaatggactcatgcttg 88
|||||||||||||||||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 68 tgacagaagagagtgagcacacatggtggctttcttgcatatttgatggtttcatgcttg 127
Query: 89 aagctatgtgtgctcact 106
||||||||||||||||||
Sbjct: 128 aagctatgtgtgctcact 145
>42487_sbi-MIR156c:mirbase
Length = 95
Score = 89.7 bits (45), Expect = 5e-19
Identities = 73/82 (89%), Gaps = 4/82 (4%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatgctgaa----tggactcatg 84
|||||||||||||||||||||||||||| |||||||||||| |||| |||| |||||
Sbjct: 1 tgacagaagagagtgagcacacatggtgcctttcttgcatgatgaatgagtggattcatg 60
Query: 85 cttgaagctatgtgtgctcact 106
|| ||||||||| |||||||||
Sbjct: 61 ctcgaagctatgcgtgctcact 82
>42451_sof-MIR156:mirbase
Length = 137
Score = 85.7 bits (43), Expect = 9e-18
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 24 gaggctgacagaagagagtgagcacacatggtgactttcttgcatgctgaa 74
||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 16 gaggctgacagaagagagtgagcacacatggtgcctttcttgcatgatgaa 66
>42467_ssp-MIR156:mirbase
Length = 543
Score = 83.8 bits (42), Expect = 3e-17
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 25 aggctgacagaagagagtgagcacacatggtgactttcttgcatgctgaa 74
|||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 1 aggctgacagaagagagtgagcacacatggtgcctttcttgcatgatgaa 50
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtg 56
||||||||||||||||||||||| ||||
Sbjct: 304 tgacagaagagagtgagcacacacggtg 331
>40007_ath-MIR156f:mirbase
Length = 132
Score = 83.8 bits (42), Expect = 3e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatgctgaatggactcatgcttg 88
|||||||||||||||||||||||||||| ||||||||||| | | || ||||||||
Sbjct: 21 tgacagaagagagtgagcacacatggtggctttcttgcatatttgaaggttccatgcttg 80
Query: 89 aagctatgtgtgctcact 106
||||||||||||||||||
Sbjct: 81 aagctatgtgtgctcact 98
>42680_zma-MIR156c:mirbase
Length = 139
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 27 gctgacagaagagagtgagcacacatggtgactttcttgcatg 69
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 19 gctgacagaagagagtgagcacacatggtgcctttcttgcatg 61
>41081_tcc-MIR156b:mirbase
Length = 129
Score = 61.9 bits (31), Expect = 1e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatgct 71
||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacacagggtg-ctttcttgcatgct 62
>41043_ghr-MIR156b:mirbase
Length = 113
Score = 61.9 bits (31), Expect = 1e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatgct 71
||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacacagggt-actttcttgcatgct 44
>41042_ghr-MIR156a:mirbase
Length = 104
Score = 61.9 bits (31), Expect = 1e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatgct 71
||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacacagggt-actttcttgcatgct 50
>40006_ath-MIR156e:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 1e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatgct 71
|||||||||||||||||||||||||||| |||||||||||||
Sbjct: 7 tgacagaagagagtgagcacacatggtg-gtttcttgcatgct 48
>39794_aly-MIR156e:mirbase
Length = 150
Score = 61.9 bits (31), Expect = 1e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatgct 71
|||||||||||||||||||||||||||| |||||||||||||
Sbjct: 26 tgacagaagagagtgagcacacatggtg-gtttcttgcatgct 67
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 tcatgcttgaagctatgtgtgct 102
|||||||||||||||||||||||
Sbjct: 85 tcatgcttgaagctatgtgtgct 107
>41291_ptc-MIR156d:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatg 69
||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 11 tgacagaagagagtgagcacacagggt-actttcttgcatg 50
>41289_ptc-MIR156b:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatg 69
||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 11 tgacagaagagagtgagcacacagggt-actttcttgcatg 50
>40332_rco-MIR156c:mirbase
Length = 94
Score = 58.0 bits (29), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatg 69
||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 6 tgacagaagagagtgagcacacatggt-actttcctgcatg 45
>40650_mtr-MIR156c:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtg 56
||||||||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacacatggtg 33
>41563_vvi-MIR156c:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggt 55
|||||||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacacatggt 37
>40649_mtr-MIR156b:mirbase
Length = 95
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggt 55
|||||||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacacatggt 32
>40330_rco-MIR156a:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggt 55
|||||||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacacatggt 32
>42633_tae-MIR156:mirbase
Length = 278
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 26 ggctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||||
Sbjct: 93 ggctgacagaagagagtgagcacaca 118
>41910_osa-MIR156g:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 26 ggctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||||
Sbjct: 1 ggctgacagaagagagtgagcacaca 26
>40425_gma-MIR156a:mirbase
Length = 122
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 24 gaggctgacagaagagagtgagcaca 49
||||||||||||||||||||||||||
Sbjct: 16 gaggctgacagaagagagtgagcaca 41
>41905_osa-MIR156b:mirbase
Length = 176
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacacatggtg 56
|||||||||||||||||||||||| ||||
Sbjct: 42 ctgacagaagagagtgagcacacacggtg 70
>41083_tcc-MIR156d:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 5e-07
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtgactttcttgcatg 69
||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 21 tgacagaagagagtgagcacacagggt-tctttcttgcatg 60
>40008_ath-MIR156g:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 gacagaagagagtgagcacacatgg 54
|||||||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcacacatgg 36
>39796_aly-MIR156g:mirbase
Length = 138
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 gacagaagagagtgagcacacatgg 54
|||||||||||||||||||||||||
Sbjct: 33 gacagaagagagtgagcacacatgg 57
>42683_zma-MIR156f:mirbase
Length = 167
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 21 ggtgaggctgacagaagagagtgagcac 48
|||| |||||||||||||||||||||||
Sbjct: 13 ggtgtggctgacagaagagagtgagcac 40
>42679_zma-MIR156b:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtg 56
||||||||||||||||||||||| ||||
Sbjct: 21 tgacagaagagagtgagcacacacggtg 48
>42678_zma-MIR156a:mirbase
Length = 152
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||
Sbjct: 17 ctgacagaagagagtgagcacaca 40
>42493_sbi-MIR156i:mirbase
Length = 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||
Sbjct: 2 ctgacagaagagagtgagcacaca 25
>42486_sbi-MIR156b:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacacatggtg 56
||||||||||||||||||||||| ||||
Sbjct: 1 tgacagaagagagtgagcacacacggtg 28
>41904_osa-MIR156a:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 24 gaggctgacagaagagagtgagcacacatggt 55
|||| |||||||||||||||||||||| ||||
Sbjct: 2 gagggtgacagaagagagtgagcacacgtggt 33
>41562_vvi-MIR156b:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagcacaca 33
>41293_ptc-MIR156f:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagcacaca 33
>41290_ptc-MIR156c:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagcacaca 33
>41288_ptc-MIR156a:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagcacaca 33
>40004_ath-MIR156c:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||
Sbjct: 11 ctgacagaagagagtgagcacaca 34
>40002_ath-MIR156a:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagcacaca 43
>39792_aly-MIR156c:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||
Sbjct: 10 ctgacagaagagagtgagcacaca 33
>39790_aly-MIR156a:mirbase
Length = 184
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacaca 51
||||||||||||||||||||||||
Sbjct: 48 ctgacagaagagagtgagcacaca 71
>42684_zma-MIR156g:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 ggctgacagaagagagtgagcac 48
|||||||||||||||||||||||
Sbjct: 1 ggctgacagaagagagtgagcac 23
>41909_osa-MIR156f:mirbase
Length = 186
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacaca 51
|||||||||||||||||||||||
Sbjct: 4 tgacagaagagagtgagcacaca 26
>41881_hvu-MIR156:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacaca 51
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacaca 23
>41727_bdi-MIR156b:mirbase
Length = 205
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacaca 51
|||||||||||||||||||||||
Sbjct: 31 tgacagaagagagtgagcacaca 53
>41292_ptc-MIR156e:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacaca 51
|||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33
>41277_ctr-MIR156:mirbase
Length = 190
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacac 50
|||||||||||||||||||||||
Sbjct: 34 ctgacagaagagagtgagcacac 56
>41217_csi-MIR156:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacac 50
|||||||||||||||||||||||
Sbjct: 12 ctgacagaagagagtgagcacac 34
>41086_tcc-MIR156g:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacaca 51
|||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacaca 43
>41082_tcc-MIR156c:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacac 50
|||||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagcacac 42
>40333_rco-MIR156d:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 28 ctgacagaagagagtgagcacac 50
|||||||||||||||||||||||
Sbjct: 5 ctgacagaagagagtgagcacac 27
>40331_rco-MIR156b:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacaca 51
|||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacaca 28
>40258_bna-MIR156a:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacaca 51
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacaca 23
>40005_ath-MIR156d:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacaca 51
|||||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcacaca 40
>39793_aly-MIR156d:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacaca 51
|||||||||||||||||||||||
Sbjct: 17 tgacagaagagagtgagcacaca 39
>42689_zma-MIR156l:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacac 50
||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacac 23
>42686_zma-MIR156i:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacac 50
||||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcacac 34
>42685_zma-MIR156h:mirbase
Length = 115
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacac 50
||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacac 41
>42682_zma-MIR156e:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacac 50
||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacac 41
>42681_zma-MIR156d:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacac 50
||||||||||||||||||||||
Sbjct: 16 tgacagaagagagtgagcacac 37
>42492_sbi-MIR156h:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacac 50
||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacac 23
>42491_sbi-MIR156g:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagagagtgagcacac 50
||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacac 23
>42490_sbi-MIR156f:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 27 gctgacagaagagagtgagcac 48
||||||||||||||||||||||
Sbjct: 1 gctgacagaagagagtgagcac 22
