miRNEST 2.0, an integrative microRNA resource :: BLAST
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 103 bits (52), Expect = 5e-23
Identities = 148/177 (83%), Gaps = 6/177 (3%)
Strand = Plus / Plus
Query: 10 gtggagctcctttcgttccaatgaaaggtttatctgaagggtga-tacagctgcttgttc 68
||||||||||| || |||||||||| ||| || | ||||||| | |||||||||||||
Sbjct: 2 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttc 61
Query: 69 atggttcccactattctatctc-ataggaaaa----gagataggcttgtggtttgcatga 123
|||||||||||||| ||||||| || ||| | ||||||||||||||||||||||||
Sbjct: 62 atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 121
Query: 124 ccaaggagccgaatcaactccttgctgaccactctttggattgaagggagctctgca 180
| |||||||| || | ||| ||||||| || |||||||||||||||||||||||
Sbjct: 122 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgca 178
>42634_tae-MIR159a:mirbase
Length = 177
Score = 101 bits (51), Expect = 2e-22
Identities = 148/177 (83%), Gaps = 5/177 (2%)
Strand = Plus / Plus
Query: 10 gtggagctcctttcgttccaatgaaaggtttatctgaagggtga-tacagctgcttgttc 68
||||||||||| || |||||||||| ||| || | ||||||| | |||||||| ||||
Sbjct: 1 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 60
Query: 69 atggttcccactattctatctc-ataggaaaagag---ataggcttgtggtttgcatgac 124
|||||||||||||| ||||||| |||| ||| ||| | |||| |||||||||||||||
Sbjct: 61 atggttcccactatcctatctccatagaaaacgaggagagaggcctgtggtttgcatgac 120
Query: 125 caaggagccgaatcaactccttgctgaccactctttggattgaagggagctctgcat 181
| |||||||| || | ||| ||||||| || ||||||||||||||||||||||||
Sbjct: 121 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 177
>42690_zma-MIR159a:mirbase
Length = 246
Score = 97.6 bits (49), Expect = 3e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
|||||||||||||||||||||||||| |||||| | | | | |||||||| || |||||
Sbjct: 149 gagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctt 208
Query: 160 tggattgaagggagctctgcatcttgatc 188
||||||||||||||||||||||| |||||
Sbjct: 209 tggattgaagggagctctgcatcctgatc 237
Score = 56.0 bits (28), Expect = 1e-08
Identities = 74/88 (84%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 6 tgaagtggagctcctttcgttccaatgaaaggtttatctgaaggg-tgatacagctgctt 64
||||| ||||||||| || |||||||||| ||| || |||||| || | | ||||||
Sbjct: 16 tgaagcggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctc 75
Query: 65 gttcatggttcccactattctatctcat 92
|||||||||||||||||| |||||||||
Sbjct: 76 gttcatggttcccactatcctatctcat 103
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 97.6 bits (49), Expect = 3e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
|||||||||||||||||||||||||| |||||| | | | | |||||||| || |||||
Sbjct: 165 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 224
Query: 160 tggattgaagggagctctgcatcttgatc 188
||||||||||||||||||||||| |||||
Sbjct: 225 tggattgaagggagctctgcatcctgatc 253
Score = 61.9 bits (31), Expect = 2e-10
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 6 tgaagtggagctcctttcgttccaatgaaaggtttatctgaagggtgatacagctgcttg 65
||||| ||||||||| || |||||||||| || |||||||||| | | |||||| |
Sbjct: 13 tgaagcggagctcctatcattccaatgaagggccgttctgaagggttgttccgctgctcg 72
Query: 66 ttcatggttcccactattctatctcat 92
||||||||||||||||| |||||||||
Sbjct: 73 ttcatggttcccactatcctatctcat 99
>42452_sof-MIR159a:mirbase
Length = 265
Score = 97.6 bits (49), Expect = 3e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
|||||||||||||||||||||||||| |||||| | | | | |||||||| || |||||
Sbjct: 168 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 227
Query: 160 tggattgaagggagctctgcatcttgatc 188
||||||||||||||||||||||| |||||
Sbjct: 228 tggattgaagggagctctgcatcctgatc 256
Score = 61.9 bits (31), Expect = 2e-10
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 6 tgaagtggagctcctttcgttccaatgaaaggtttatctgaagggtgatacagctgcttg 65
||||| ||||||||| || |||||||||| || |||||||||| | | |||||| |
Sbjct: 16 tgaagcggagctcctatcattccaatgaagggccgttctgaagggttgttccgctgctcg 75
Query: 66 ttcatggttcccactattctatctcat 92
||||||||||||||||| |||||||||
Sbjct: 76 ttcatggttcccactatcctatctcat 102
>41868_far-MIR159:mirbase
Length = 200
Score = 95.6 bits (48), Expect = 1e-20
Identities = 158/192 (82%), Gaps = 7/192 (3%)
Strand = Plus / Plus
Query: 1 ggttatgaagtggagctcctttcgttccaatgaaaggtttatct--gaagggtgatacag 58
|||| ||| ||||||||||| || |||||||||||||| | || || ||||| |||||
Sbjct: 5 ggttttgaggtggagctcctatcattccaatgaaaggtcttgctaggaggggtggtacag 64
Query: 59 ctgcttgttcatggttcccactattctatctca-taggaaaa----gagataggcttgtg 113
||||| |||||||||||||||||| ||| ||| | |||| ||||||||| ||||
Sbjct: 65 ctgctcgttcatggttcccactatcctacctccgtttgaaaccagggagataggcctgtg 124
Query: 114 gtttgcatgaccaaggagccgaatcaactccttgctgaccactctttggattgaagggag 173
| | |||||||| |||||||| ||| | ||| |||| || |||||||||||||||||||
Sbjct: 125 gctagcatgaccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggag 184
Query: 174 ctctgcatcttg 185
||||||||||||
Sbjct: 185 ctctgcatcttg 196
>42453_sof-MIR159b:mirbase
Length = 266
Score = 93.7 bits (47), Expect = 5e-20
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
|||||||||||||||||||||||||| |||||| | | | | |||||||| || |||||
Sbjct: 169 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 228
Query: 160 tggattgaagggagctctgcatc 182
|||||||||||||||||||||||
Sbjct: 229 tggattgaagggagctctgcatc 251
Score = 69.9 bits (35), Expect = 7e-13
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 6 tgaagtggagctcctttcgttccaatgaaaggtttatctgaagggtgatacagctgcttg 65
||||| ||||||||| || |||||||||| || ||||||||||| | | |||||| |
Sbjct: 16 tgaagcggagctcctatcattccaatgaagggccgttctgaagggtggttccgctgctcg 75
Query: 66 ttcatggttcccactattctatctcat 92
||||||||||||||||| |||||||||
Sbjct: 76 ttcatggttcccactatcctatctcat 102
>42494_sbi-MIR159:mirbase
Length = 226
Score = 89.7 bits (45), Expect = 7e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
|||||||||||||||||||||||||| |||||| | | | | |||||||| || |||||
Sbjct: 146 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 205
Query: 160 tggattgaagggagctctgca 180
|||||||||||||||||||||
Sbjct: 206 tggattgaagggagctctgca 226
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 58 gctgcttgttcatggttcccactattctatctcat 92
|||||| |||||||||||||||||| |||||||||
Sbjct: 50 gctgctcgttcatggttcccactatcctatctcat 84
>42695_zma-MIR159f:mirbase
Length = 215
Score = 87.7 bits (44), Expect = 3e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
|||||||||||||||||||||||||| |||||| | | | || || ||||| || |||||
Sbjct: 136 gagataggcttgtggtttgcatgaccgaggagctgcaccgaccccgtgctggccgctctt 195
Query: 160 tggattgaagggagctctgc 179
||||||||||||||||||||
Sbjct: 196 tggattgaagggagctctgc 215
Score = 65.9 bits (33), Expect = 1e-11
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 12 ggagctcctttcgttccaatgaaaggtttatctgaagggtgatacagctgcttgttcatg 71
||||||||| || |||||||||| ||| || |||||||| | | |||||| |||||||
Sbjct: 1 ggagctcctctcattccaatgaagggtccttccgaagggtggttccgctgctcgttcatg 60
Query: 72 gttcccactattctatctcat 92
||||||||||| |||||||||
Sbjct: 61 gttcccactatcctatctcat 81
>42455_sof-MIR159d:mirbase
Length = 265
Score = 81.8 bits (41), Expect = 2e-16
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
|||||| ||||||||||||||||||| | |||| | | | | |||||||| || |||||
Sbjct: 168 gagatacgcttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctt 227
Query: 160 tggattgaagggagctctgcatcttgatc 188
||||||||||||||||||||||| |||||
Sbjct: 228 tggattgaagggagctctgcatcctgatc 256
Score = 61.9 bits (31), Expect = 2e-10
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 6 tgaagtggagctcctttcgttccaatgaaaggtttatctgaagggtgatacagctgcttg 65
||||| ||||||||| || |||||||||| || |||||||||| | | |||||| |
Sbjct: 16 tgaagcggagctcctatcattccaatgaagggccgttctgaagggttgttccgctgctcg 75
Query: 66 ttcatggttcccactattctatctcat 92
||||||||||||||||| |||||||||
Sbjct: 76 ttcatggttcccactatcctatctcat 102
>42456_sof-MIR159e:mirbase
Length = 264
Score = 69.9 bits (35), Expect = 7e-13
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 6 tgaagtggagctcctttcgttccaatgaaaggtttatctgaagggtgatacagctgcttg 65
||||| ||||||||| || |||||||||| || ||||||||||| | | |||||| |
Sbjct: 15 tgaagcggagctcctatcattccaatgaagggccgttctgaagggtggttccgctgctcg 74
Query: 66 ttcatggttcccactattctatctcat 92
||||||||||||||||| |||||||||
Sbjct: 75 ttcatggttcccactatcctatctcat 101
Score = 67.9 bits (34), Expect = 3e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
|||||||||||||||||||||||||| | |||| | | | | |||||||| || |||||
Sbjct: 167 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 226
Query: 160 tggattgaagggagctct 177
||||||||| ||||||||
Sbjct: 227 tggattgaaaggagctct 244
>42700_zma-MIR159k:mirbase
Length = 200
Score = 65.9 bits (33), Expect = 1e-11
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactcctt-gctgaccactct 158
||||| |||||||||||||||||||| |||||| | ||| | |||| | ||||| || |
Sbjct: 120 gagatgggcttgtggtttgcatgaccgaggagctgcatcgtccccttcgttgaccgctgt 179
Query: 159 ttggattgaagggagctctgc 179
|||||||||||||||||||||
Sbjct: 180 ttggattgaagggagctctgc 200
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 41 atctgaagggtgatacagctgcttgttcatggttcccact 80
|||||| ||||| |||| ||||| ||||||||||||||||
Sbjct: 30 atctgatgggtggtacaactgctcgttcatggttcccact 69
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 148 ctgaccactctttggattgaagggagctctgcatcttgatc 188
|||||| || |||||||||||||||||||||||||||||||
Sbjct: 1 ctgaccgctgtttggattgaagggagctctgcatcttgatc 41
>42691_zma-MIR159b:mirbase
Length = 221
Score = 61.9 bits (31), Expect = 2e-10
Identities = 75/87 (86%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactcctt-gctgaccactct 158
||||| |||||||||||||||||||| |||||| | | | | |||| | ||||| || |
Sbjct: 124 gagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgctgt 182
Query: 159 ttggattgaagggagctctgcatcttg 185
|||||||||||||||||||||||||||
Sbjct: 183 ttggattgaagggagctctgcatcttg 209
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 41 atctgaagggtgatacagctgcttgttcatggttcccact 80
|||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 51 atctgatgggtggtacagctgctcgttcatggttcccact 90
>41917_osa-MIR159a:mirbase
Length = 272
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 155 ctctttggattgaagggagctctgcatctt 184
||||||||||||||||||||||||||||||
Sbjct: 239 ctctttggattgaagggagctctgcatctt 268
>41916_osa-MIR159a:mirbase
Length = 272
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 155 ctctttggattgaagggagctctgcatctt 184
||||||||||||||||||||||||||||||
Sbjct: 239 ctctttggattgaagggagctctgcatctt 268
>42699_zma-MIR159j:mirbase
Length = 252
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactcctt-gctgaccactct 158
||||| |||||||||||||||||||| |||||| | || | |||| | ||||| || |
Sbjct: 172 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 231
Query: 159 ttggattgaagggagctctgc 179
|||||||||||||||||||||
Sbjct: 232 ttggattgaagggagctctgc 252
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 41 atctgaagggtgatacagctgcttgttcatggttcccact 80
|||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 82 atctgatgggtggtacagctgctcgttcatggttcccact 121
>42635_tae-MIR159b:mirbase
Length = 255
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 155 ctctttggattgaagggagctctgcatct 183
|||||||||||||||||||||||||||||
Sbjct: 227 ctctttggattgaagggagctctgcatct 255
>42698_zma-MIR159i:mirbase
Length = 252
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 41 atctgaagggtgatacagctgcttgttcatggttcccact 80
|||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 82 atctgatgggtggtacagctgctcgttcatggttcccact 121
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagc 132
||||| |||||||||||||||||||| ||||||
Sbjct: 172 gagatgggcttgtggtttgcatgaccgaggagc 204
>42697_zma-MIR159h:mirbase
Length = 200
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 41 atctgaagggtgatacagctgcttgttcatggttcccact 80
|||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 30 atctgatgggtggtacagctgctcgttcatggttcccact 69
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagc 132
||||| |||||||||||||||||||| ||||||
Sbjct: 120 gagatgggcttgtggtttgcatgaccgaggagc 152
>42696_zma-MIR159g:mirbase
Length = 252
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 41 atctgaagggtgatacagctgcttgttcatggttcccact 80
|||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 82 atctgatgggtggtacagctgctcgttcatggttcccact 121
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 100 gagataggcttgtggtttgcatgaccaaggagc 132
||||| |||||||||||||||||||| ||||||
Sbjct: 172 gagatgggcttgtggtttgcatgaccgaggagc 204
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctctgcatcttg 185
|||||||||||||||||||||| |||||||
Sbjct: 150 tctttggattgaagggagctctacatcttg 179
>39804_aly-MIR159a:mirbase
Length = 222
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctctgcatctt 184
|||||||||||||||||||||| ||||||
Sbjct: 181 tctttggattgaagggagctctacatctt 209
>40017_ath-MIR159b:mirbase
Length = 196
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctctgcatct 183
|||||||||||||||||||||| |||||
Sbjct: 166 tctttggattgaagggagctcttcatct 193
>39805_aly-MIR159b:mirbase
Length = 202
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctctgcatct 183
|||||||||||||||||||||| |||||
Sbjct: 167 tctttggattgaagggagctcttcatct 194
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 173 tctttggattgaagggagctct 194
>40338_rco-MIR159:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctctgcatct 183
|||||||||||||||||||| |||||
Sbjct: 155 tttggattgaagggagctctacatct 180
>40311_bra-MIR159a:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 159 tctttggattgaagggagctct 180
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctct 177
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
