miRNEST 2.0, an integrative microRNA resource :: BLAST
>41919_osa-MIR159c:mirbase
Length = 197
Score = 214 bits (108), Expect = 2e-56
Identities = 159/177 (89%), Gaps = 8/177 (4%)
Strand = Plus / Plus
Query: 10 gaggagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcat 69
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 10 gaggagctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcat 69
Query: 70 ggatacctctgcagttcatgccgg--------taggcctgcacttgcatgggtttgcatg 121
||||||||||| ||| |||| | | ||||||||||||||||||||||||||||
Sbjct: 70 ggatacctctggagtgcatggcagcaatgctgtaggcctgcacttgcatgggtttgcatg 129
Query: 122 acctgggagatgaacctgccattgtgttcctctattgattggattgaagggagctcc 178
||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 130 acccgggagatgaacccaccattgtcttcctctattgattggattgaagggagctcc 186
>41922_osa-MIR159f:mirbase
Length = 188
Score = 208 bits (105), Expect = 1e-54
Identities = 151/165 (91%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
Query: 73 tacctctgcagttcatgccggtaggcctgcacttgcatgggtttgcatgacctgggagat 132
|||||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||
Sbjct: 73 tacctctgcagtgcatgtc-gtaggcttgcacttgcatgggtttgcatgacccgggagat 131
Query: 133 gaacctgccattgtgttcctctattgattggattgaagggagctc 177
||||| ||||||| ||||||| || ||||||||||||||||||
Sbjct: 132 gaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
>41921_osa-MIR159e:mirbase
Length = 191
Score = 186 bits (94), Expect = 4e-48
Identities = 146/162 (90%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 18 cctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatggatacct 77
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 19 cctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttcatggatacct 78
Query: 78 ctgcagttca-tgccggtaggcctgcacttgcatgggtttgcatgacctgggagatgaac 136
||| ||| || || ||| ||| | ||| |||||||||||||||| |||||||||||
Sbjct: 79 ctggagtgcagggcaaatagtcctaccctttcatgggtttgcatgactcgggagatgaac 138
Query: 137 ctgccattgtgttcctctattgattggattgaagggagctcc 178
| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 139 ccgccattgtcttcctctattgattggattgaagggagctcc 180
>41730_bdi-MIR159:mirbase
Length = 234
Score = 97.6 bits (49), Expect = 3e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||||
Sbjct: 30 gagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatgga 89
Query: 73 tacct 77
|||||
Sbjct: 90 tacct 94
>42692_zma-MIR159c:mirbase
Length = 217
Score = 93.7 bits (47), Expect = 5e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||||
Sbjct: 23 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 82
Query: 73 tacctct 79
|||||||
Sbjct: 83 tacctct 89
>42693_zma-MIR159d:mirbase
Length = 217
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
||||||| ||||||||||| |||||| | ||||||| || ||||||||||||||||||||
Sbjct: 23 gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
Query: 73 tacctct 79
|||||||
Sbjct: 83 tacctct 89
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||||
Sbjct: 61 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 120
Query: 73 tacctct 79
| |||||
Sbjct: 121 tgcctct 127
>42454_sof-MIR159c:mirbase
Length = 238
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||||
Sbjct: 46 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 105
Query: 73 tacctct 79
| |||||
Sbjct: 106 tgcctct 112
Score = 65.9 bits (33), Expect = 1e-11
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 98 cctgcacttgcatgggtttgcatgacctgggagatgaacctgccattgtgttcctctatt 157
||||||||||||||||| ||||||||| |||||||||||| |||| | || | || |
Sbjct: 138 cctgcacttgcatgggtgtgcatgacccgggagatgaacccaccatcatctttccctcgt 197
Query: 158 gattggattgaagggagctcc 178
| |||||||||||||||||||
Sbjct: 198 gcttggattgaagggagctcc 218
>40433_gma-MIR159b:mirbase
Length = 186
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 111 gggtttgcatgacctgggagatga 134
||||||||||| ||||||||||||
Sbjct: 112 gggtttgcatgccctgggagatga 135
