miRNEST 2.0, an integrative microRNA resource :: BLAST
>41919_osa-MIR159c:mirbase
Length = 197
Score = 210 bits (106), Expect = 3e-55
Identities = 154/169 (91%), Gaps = 7/169 (4%)
Strand = Plus / Plus
Query: 19 cctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttcatggatacct 78
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 18 cctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcatggatacct 77
Query: 79 ctggagtgcagggca--aa-----tagtcctaccctttcatgggtttgcatgactcggga 131
|||||||||| |||| || ||| ||| | ||| |||||||||||||||| |||||
Sbjct: 78 ctggagtgcatggcagcaatgctgtaggcctgcacttgcatgggtttgcatgacccggga 137
Query: 132 gatgaacccgccattgtcttcctctattgattggattgaagggagctcc 180
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gatgaacccaccattgtcttcctctattgattggattgaagggagctcc 186
>41920_osa-MIR159d:mirbase
Length = 189
Score = 186 bits (94), Expect = 4e-48
Identities = 146/162 (90%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 19 cctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttcatggatacct 78
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 18 cctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatggatacct 77
Query: 79 ctggagtgcagggcaaatagtcctaccctttcatgggtttgcatgactcgggagatgaac 138
||| ||| || || ||| ||| | ||| |||||||||||||||| |||||||||||
Sbjct: 78 ctgcagttca-tgccggtaggcctgcacttgcatgggtttgcatgacctgggagatgaac 136
Query: 139 ccgccattgtcttcctctattgattggattgaagggagctcc 180
| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 137 ctgccattgtgttcctctattgattggattgaagggagctcc 178
>41922_osa-MIR159f:mirbase
Length = 188
Score = 184 bits (93), Expect = 2e-47
Identities = 157/176 (89%), Gaps = 3/176 (1%)
Strand = Plus / Plus
Query: 4 gaagaagaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgcc 63
|||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4 gaagaagacgagctccctt-cgatccaatccaggagaggaagtggtaggatgcagctgcc 62
Query: 64 ggttcatggatacctctggagtgcagggcaaatagtcctaccctttcatgggtttgcatg 123
|||||||||||||||||| |||||| | | ||| | | | ||| ||||||||||||||
Sbjct: 63 ggttcatggatacctctgcagtgcatgtc--gtaggcttgcacttgcatgggtttgcatg 120
Query: 124 actcgggagatgaacccgccattgtcttcctctattgattggattgaagggagctc 179
|| |||||||||||||| ||||||||||||||| || ||||||||||||||||||
Sbjct: 121 acccgggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
>41730_bdi-MIR159:mirbase
Length = 234
Score = 107 bits (54), Expect = 3e-24
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 5 aagaagaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccg 64
|||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||
Sbjct: 22 aagaagaagagctccctt-cgatccaatccaggaggggaagtggtcggatgcagctgccg 80
Query: 65 gttcatggatacct 78
||||||||||||||
Sbjct: 81 gttcatggatacct 94
>42692_zma-MIR159c:mirbase
Length = 217
Score = 93.7 bits (47), Expect = 5e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 10 gaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttca 69
||||||||||||| ||||||||| |||||| ||||||||| || ||||||||||||||||
Sbjct: 20 gaagagctccctt-cgatccaatccaggaggggaagtggtcggttgcagctgccggttca 78
Query: 70 tggatacctct 80
|||||||||||
Sbjct: 79 tggatacctct 89
>42454_sof-MIR159c:mirbase
Length = 238
Score = 87.7 bits (44), Expect = 3e-18
Identities = 148/180 (82%), Gaps = 7/180 (3%)
Strand = Plus / Plus
Query: 10 gaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttca 69
||||||||||||| ||||||||| |||||| ||||||||| || ||||||||||||||||
Sbjct: 43 gaagagctccctt-cgatccaatccaggaggggaagtggtcggttgcagctgccggttca 101
Query: 70 tggatacctctggagtgcag----ggcaaatagt--cctaccctttcatgggtttgcatg 123
||||| ||||| |||||| | | ||| | ||| | ||| ||||||| ||||||
Sbjct: 102 tggatgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatg 161
Query: 124 actcgggagatgaacccgccattgtcttcctctattgattggattgaagggagctcctct 183
|| |||||||||||||| |||| |||| | || || ||||||||||||||||||||||
Sbjct: 162 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcctct 221
>42693_zma-MIR159d:mirbase
Length = 217
Score = 85.7 bits (43), Expect = 1e-17
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 10 gaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttca 69
||||||||||||| ||||||||| |||||| | ||||||| || ||||||||||||||||
Sbjct: 20 gaagagctccctt-cgatccaatccaggagggaaagtggtcggctgcagctgccggttca 78
Query: 70 tggatacctct 80
|||||||||||
Sbjct: 79 tggatacctct 89
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 83.8 bits (42), Expect = 4e-17
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 11 aagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttcat 70
|||||||||||| ||||||||| |||||| ||||||||| || |||||||||||||||||
Sbjct: 59 aagagctccctt-cgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 117
Query: 71 ggatacctct 80
|||| |||||
Sbjct: 118 ggatgcctct 127
>41302_ptc-MIR159d:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 ttggattgaagggagctcct 181
||||||||||||||||||||
Sbjct: 166 ttggattgaagggagctcct 185
>40018_ath-MIR159c:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 ttggattgaagggagctcct 181
||||||||||||||||||||
Sbjct: 196 ttggattgaagggagctcct 215
>39806_aly-MIR159c:mirbase
Length = 220
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 ttggattgaagggagctcct 181
||||||||||||||||||||
Sbjct: 198 ttggattgaagggagctcct 217
