miRNEST 2.0, an integrative microRNA resource :: BLAST
>41919_osa-MIR159c:mirbase
Length = 197
Score = 220 bits (111), Expect = 3e-58
Identities = 170/191 (89%), Gaps = 9/191 (4%)
Strand = Plus / Plus
Query: 7 gaagacgagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggtt 66
||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 7 gaagaggagctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgatt 66
Query: 67 catggatacctctgcagtgcatgtc---------gtaggcttgcacttgcatgggtttgc 117
|||||||||||||| |||||||| | |||||| |||||||||||||||||||
Sbjct: 67 catggatacctctggagtgcatggcagcaatgctgtaggcctgcacttgcatgggtttgc 126
Query: 118 atgacccgggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctct 177
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 127 atgacccgggagatgaacccaccattgtcttcctctattgattggattgaagggagctcc 186
Query: 178 acacctctctc 188
||| |||||||
Sbjct: 187 acatctctctc 197
>41920_osa-MIR159d:mirbase
Length = 189
Score = 208 bits (105), Expect = 1e-54
Identities = 151/165 (91%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
Query: 73 tacctctgcagtgcatgtc-gtaggcttgcacttgcatgggtttgcatgacccgggagat 131
|||||||||||| |||| | |||||| ||||||||||||||||||||||||| |||||||
Sbjct: 73 tacctctgcagttcatgccggtaggcctgcacttgcatgggtttgcatgacctgggagat 132
Query: 132 gaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
||||| ||||||| ||||||| || ||||||||||||||||||
Sbjct: 133 gaacctgccattgtgttcctctattgattggattgaagggagctc 177
>41921_osa-MIR159e:mirbase
Length = 191
Score = 184 bits (93), Expect = 2e-47
Identities = 157/176 (89%), Gaps = 3/176 (1%)
Strand = Plus / Plus
Query: 4 gaagaagacgagctccctt-cgatccaatccaggagaggaagtggtaggatgcagctgcc 62
|||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4 gaagaagaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgcc 63
Query: 63 ggttcatggatacctctgcagtgcatgtc--gtaggcttgcacttgcatgggtttgcatg 120
|||||||||||||||||| |||||| | | ||| | | | ||| ||||||||||||||
Sbjct: 64 ggttcatggatacctctggagtgcagggcaaatagtcctaccctttcatgggtttgcatg 123
Query: 121 acccgggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
|| |||||||||||||| ||||||||||||||| || ||||||||||||||||||
Sbjct: 124 actcgggagatgaacccgccattgtcttcctctattgattggattgaagggagctc 179
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 131 bits (66), Expect = 2e-31
Identities = 146/172 (84%), Gaps = 8/172 (4%)
Strand = Plus / Plus
Query: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
|||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 61 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 120
Query: 73 tacctctgcagtgc----atgtcgtaggct----tgcacttgcatgggtttgcatgaccc 124
| ||||| |||| ||| | | ||| ||||||||||||||| ||||||||||
Sbjct: 121 tgcctctctggtgcagcaatgactgatgctcacctgcacttgcatgggtgtgcatgaccc 180
Query: 125 gggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
|||||||||||||||||| |||| | || |||||||||||||||||||||
Sbjct: 181 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 232
>42454_sof-MIR159c:mirbase
Length = 238
Score = 131 bits (66), Expect = 2e-31
Identities = 146/172 (84%), Gaps = 8/172 (4%)
Strand = Plus / Plus
Query: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
|||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 46 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 105
Query: 73 tacctctgcagtgc----atgtcgtaggct----tgcacttgcatgggtttgcatgaccc 124
| ||||| |||| ||| | | ||| ||||||||||||||| ||||||||||
Sbjct: 106 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 165
Query: 125 gggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
|||||||||||||||||| |||| | || |||||||||||||||||||||
Sbjct: 166 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 217
>41730_bdi-MIR159:mirbase
Length = 234
Score = 121 bits (61), Expect = 2e-28
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 5 aagaagacgagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccgg 64
||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 22 aagaagaagagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccgg 81
Query: 65 ttcatggatacct 77
|||||||||||||
Sbjct: 82 ttcatggatacct 94
>42692_zma-MIR159c:mirbase
Length = 217
Score = 109 bits (55), Expect = 8e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
|||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 23 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 82
Query: 73 tacctct 79
|||||||
Sbjct: 83 tacctct 89
>42693_zma-MIR159d:mirbase
Length = 217
Score = 105 bits (53), Expect = 1e-23
Identities = 145/174 (83%), Gaps = 10/174 (5%)
Strand = Plus / Plus
Query: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
|||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||||
Sbjct: 23 gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
Query: 73 tacctctgcagtgc----atgtcgtag--gct----tgcacttgcatgggtttgcatgac 122
||||||| |||| ||| | || ||| ||||||||||||||| ||||||||
Sbjct: 83 tacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatgac 142
Query: 123 ccgggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
|||||||| ||||| ||||| |||| | || |||||||||||||||||||||
Sbjct: 143 ccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctacacctctctc 188
||||||||||||||||||||||||||||||
Sbjct: 161 ttggattgaagggagctctacacctctctc 190
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctacacc 182
||||||||||||||||||||||||
Sbjct: 176 ttggattgaagggagctctacacc 199
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctaca 180
||||||||||||||||||||||
Sbjct: 153 ttggattgaagggagctctaca 174
>40397_ahy-MIR159:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctaca 180
||||||||||||||||||||||
Sbjct: 158 ttggattgaagggagctctaca 179
>40338_rco-MIR159:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctaca 180
||||||||||||||||||||||
Sbjct: 156 ttggattgaagggagctctaca 177
>40311_bra-MIR159a:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctaca 180
||||||||||||||||||||||
Sbjct: 164 ttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctaca 180
||||||||||||||||||||||
Sbjct: 162 ttggattgaagggagctctaca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctaca 180
||||||||||||||||||||||
Sbjct: 184 ttggattgaagggagctctaca 205
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctacacct 183
|||||||||||||||||||| ||||
Sbjct: 159 ttggattgaagggagctctaaacct 183
>41218_csi-MIR159:mirbase
Length = 216
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctac 179
|||||||||||||||||||||
Sbjct: 187 ttggattgaagggagctctac 207
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctac 179
|||||||||||||||||||||
Sbjct: 154 ttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctac 179
|||||||||||||||||||||
Sbjct: 154 ttggattgaagggagctctac 174
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctac 179
|||||||||||||||||||||
Sbjct: 164 ttggattgaagggagctctac 184
>41528_sly-MIR159:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctcta 178
||||||||||||||||||||
Sbjct: 158 ttggattgaagggagctcta 177
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctcta 178
||||||||||||||||||||
Sbjct: 155 ttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctcta 178
||||||||||||||||||||
Sbjct: 155 ttggattgaagggagctcta 174
>40017_ath-MIR159b:mirbase
Length = 196
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctctacacctctc 186
||||||||||||||||||| || |||||
Sbjct: 169 ttggattgaagggagctcttcatctctc 196
