miRNEST 2.0, an integrative microRNA resource :: BLAST
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 77.8 bits (39), Expect = 1e-15
Identities = 80/90 (88%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgccacacatgtagaccaacccatg-gtgtctggttgcctac 60
|||||||||||||||||||||||||||||||| ||| |||||| ||| | |||||| |
Sbjct: 29 tgtgcctggctccctgtatgccacacatgtagcccagcccatgaatgt-ggtttgcctgc 87
Query: 61 --tgggtggcgtgcaaggagccaagcatgc 88
||||||||||||||||||||||||||||
Sbjct: 88 tgtgggtggcgtgcaaggagccaagcatgc 117
>41924_osa-MIR160b:mirbase
Length = 139
Score = 75.8 bits (38), Expect = 5e-15
Identities = 77/88 (87%), Gaps = 4/88 (4%)
Strand = Plus / Plus
Query: 3 gtgcctggctccctgtatgccacacatgtagaccaacccatg--gtgtctggttgcctac 60
||||||||||||||||||||||| ||||||| |||| ||||| |||| ||| |||
Sbjct: 29 gtgcctggctccctgtatgccactcatgtagcccaatccatggtgtgtttggatgc--tg 86
Query: 61 tgggtggcgtgcaaggagccaagcatgc 88
||||||||||||||||||||||||||||
Sbjct: 87 tgggtggcgtgcaaggagccaagcatgc 114
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 2e-14
Identities = 73/84 (86%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccacacatgtagaccaacccatggtgtctggttgcctac--t 61
|||||||||||||||||||||||||||||| ||||||||| | |||||||| | |
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaacccatatgctaaggttgcctgctgt 60
Query: 62 gggtggcgtgcaaggagccaagca 85
||||||||||||||| ||||||||
Sbjct: 61 gggtggcgtgcaaggggccaagca 84
>42707_zma-MIR160g:mirbase
Length = 86
Score = 71.9 bits (36), Expect = 7e-14
Identities = 75/86 (87%), Gaps = 4/86 (4%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccacacatgtagaccaacccatg--gtgtctggttgcctact 61
|||||||||||||||||||||||||||||| ||||||| || ||| ||| ||| |
Sbjct: 2 tgcctggctccctgtatgccacacatgtagcccaacccgtgatgtgattggatgc--tgt 59
Query: 62 gggtggcgtgcaaggagccaagcatg 87
||||||||||||||||||||||||||
Sbjct: 60 gggtggcgtgcaaggagccaagcatg 85
>42702_zma-MIR160b:mirbase
Length = 121
Score = 71.9 bits (36), Expect = 7e-14
Identities = 79/90 (87%), Gaps = 5/90 (5%)
Strand = Plus / Plus
Query: 1 gtgtgcctggctccctgtatgccacacatgtagaccaacccatg--gtgtctggttgcct 58
||||||||||||||||||||||||||||||||| ||||||| || ||| ||| |||
Sbjct: 18 gtgtgcctggctccctgtatgccacacatgtag-ccaacccgtggcgtgattggatgc-- 74
Query: 59 actgggtggcgtgcaaggagccaagcatgc 88
||||||||||||||||||||||||||||
Sbjct: 75 tgtgggtggcgtgcaaggagccaagcatgc 104
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccacacatgtagaccaaccc 41
|||||||||||||||||||||||||||||| |||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaaccc 38
>42701_zma-MIR160a:mirbase
Length = 104
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 3 gtgcctggctccctgtatgccacacatgtag 33
|||||||||||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgccacacatgtag 39
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 3 gtgcctggctccctgtatgccacacatgtag 33
|||||||||||||||||||||||||||||||
Sbjct: 30 gtgcctggctccctgtatgccacacatgtag 60
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 tgggtggcgtgcaaggagccaagcatgc 88
||||||||||||||||||||||||||||
Sbjct: 88 tgggtggcgtgcaaggagccaagcatgc 115
>41869_far-MIR160:mirbase
Length = 148
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccacacatgt 31
||||||||||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgccacacatgt 80
>42703_zma-MIR160c:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgccacacatgtagaccaac 39
|||||||||||||||||||||||| ||| |||| ||||
Sbjct: 5 tgtgcctggctccctgtatgccactcatctagagcaac 42
>41925_osa-MIR160c:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgccacacatgtagaccaac 39
|||||||||||||||||||||||| ||| |||| ||||
Sbjct: 5 tgtgcctggctccctgtatgccactcatctagagcaac 42
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgccacac 27
||||||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgccacac 34
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 62 gggtggcgtgcaaggagccaagcat 86
||||||||||| |||||||||||||
Sbjct: 71 gggtggcgtgcgaggagccaagcat 95
>39374_pab-MIR160a:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 gtgtgcctggctccctgtatgccaca 26
||||||||||||||||||||||||||
Sbjct: 11 gtgtgcctggctccctgtatgccaca 36
>42677_ttu-MIR160:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgccac 25
||||||||||||||||||||||||
Sbjct: 7 tgtgcctggctccctgtatgccac 30
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccacacatgtagaccaac 39
|||||||||||||||||||||| ||| |||| ||||
Sbjct: 1 tgcctggctccctgtatgccactcatctagatcaac 36
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgccac 25
||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccac 52
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gtgtgcctggctccctgtatgcca 24
||||||||||||||||||||||||
Sbjct: 3 gtgtgcctggctccctgtatgcca 26
>40339_rco-MIR160a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gtgtgcctggctccctgtatgcca 24
||||||||||||||||||||||||
Sbjct: 3 gtgtgcctggctccctgtatgcca 26
>40020_ath-MIR160b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 gtgcctggctccctgtatgccaca 26
||||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>39808_aly-MIR160b:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 gtgcctggctccctgtatgccaca 26
||||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgccaca 43
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccaca 26
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 ggtggcgtgcaaggagccaagcat 86
|||||||||| |||||||||||||
Sbjct: 73 ggtggcgtgcgaggagccaagcat 96
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgcca 24
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgcca 24
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccaca 26
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 ggtggcgtgcaaggagccaagcat 86
|||||||||| |||||||||||||
Sbjct: 72 ggtggcgtgcgaggagccaagcat 95
>41219_csi-MIR160:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgcca 24
|||||||||||||||||||||||
Sbjct: 31 tgtgcctggctccctgtatgcca 53
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgcca 24
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgcca 24
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>40436_gma-MIR160:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tgtgcctggctccctgtatgcca 24
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>40340_rco-MIR160b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccaca 26
|||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccaca 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 ggtggcgtgcaaggagccaagcat 86
|||||||||| |||||||||||||
Sbjct: 67 ggtggcgtgcgaggagccaagcat 90
>42705_zma-MIR160e:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccac 30
>42704_zma-MIR160d:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>42636_tae-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccac 43
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41926_osa-MIR160d:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgccac 29
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 32 tgcctggctccctgtatgccac 53
>40658_mtr-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 gtgcctggctccctgtatgcca 24
||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41
>40021_ath-MIR160c:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgccac 45
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 63 ggtggcgtgcaaggagccaagcatg 87
|||||||| ||||||||||||||||
Sbjct: 81 ggtggcgtacaaggagccaagcatg 105
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgccac 25
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgcca 24
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgcca 24
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgcca 24
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgcca 24
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgcca 24
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgcca 24
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgcca 24
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgcca 24
|||||||||||||||||||||
Sbjct: 42 tgcctggctccctgtatgcca 62
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgcca 24
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 gcctggctccctgtatgccac 25
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgcctggctccctgtatgcca 24
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
