miRNEST 2.0, an integrative microRNA resource :: BLAST
>41961_osa-MIR168a:mirbase
Length = 87
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 61 cgccttgcaccaagtgaatcggagccg 87
|||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagccg 87
>41753_bdi-MIR168:mirbase
Length = 136
Score = 119 bits (60), Expect = 3e-28
Identities = 83/88 (94%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-gccgctgccggggccggatc 59
||||||||||||||||||||||||||||||||| ||||| ||| | |||||| |||||||
Sbjct: 21 cgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccggg-ccggatc 79
Query: 60 ccgccttgcaccaagtgaatcggagccg 87
||||||||||||||||||||||||||||
Sbjct: 80 ccgccttgcaccaagtgaatcggagccg 107
>42741_zma-MIR168a:mirbase
Length = 104
Score = 109 bits (55), Expect = 3e-25
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||
Sbjct: 11 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcc 68
Query: 61 cgccttgcaccaagtgaatcggagccg 87
|||||||||||||||||||||||||||
Sbjct: 69 cgccttgcaccaagtgaatcggagccg 95
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 109 bits (55), Expect = 3e-25
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||
Sbjct: 8 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcc 65
Query: 61 cgccttgcaccaagtgaatcggagccg 87
|||||||||||||||||||||||||||
Sbjct: 66 cgccttgcaccaagtgaatcggagccg 92
>42459_sof-MIR168a:mirbase
Length = 104
Score = 109 bits (55), Expect = 3e-25
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||
Sbjct: 11 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcc 68
Query: 61 cgccttgcaccaagtgaatcggagccg 87
|||||||||||||||||||||||||||
Sbjct: 69 cgccttgcaccaagtgaatcggagccg 95
>41888_hvu-MIR168:mirbase
Length = 106
Score = 109 bits (55), Expect = 3e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
||||||||||||||||||||||||||||||||| ||||| | | | | |||||||||||
Sbjct: 13 cgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgac-gggccggatcc 71
Query: 61 cgccttgcaccaagtgaatcggagccg 87
|||||||||||||||||||||||||||
Sbjct: 72 cgccttgcaccaagtgaatcggagccg 98
>41887_hvu-MIR168:mirbase
Length = 106
Score = 109 bits (55), Expect = 3e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
||||||||||||||||||||||||||||||||| ||||| | | | | |||||||||||
Sbjct: 13 cgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgac-gggccggatcc 71
Query: 61 cgccttgcaccaagtgaatcggagccg 87
|||||||||||||||||||||||||||
Sbjct: 72 cgccttgcaccaagtgaatcggagccg 98
>42742_zma-MIR168b:mirbase
Length = 104
Score = 95.6 bits (48), Expect = 5e-21
Identities = 77/84 (91%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 4 ctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcccgc 63
|||||||||||||||||||||||||||||||||||| | || | | ||| ||||||||||
Sbjct: 14 ctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcccgc 71
Query: 64 cttgcaccaagtgaatcggagccg 87
|||||| |||||||||||||||||
Sbjct: 72 cttgcatcaagtgaatcggagccg 95
>42460_sof-MIR168b:mirbase
Length = 103
Score = 81.8 bits (41), Expect = 7e-17
Identities = 74/81 (91%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 7 gggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcccgcctt 66
|||||||||||| |||||||||||||||||||| | || | |||| | ||||||||||||
Sbjct: 17 gggctcgcttgg-gcagatcgggacccgccgcc-cggccgacgggac-ggatcccgcctt 73
Query: 67 gcaccaagtgaatcggagccg 87
|||||||||||||||||||||
Sbjct: 74 gcaccaagtgaatcggagccg 94
>42528_sbi-MIR168:mirbase
Length = 106
Score = 79.8 bits (40), Expect = 3e-16
Identities = 78/88 (88%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgct-gccggggccggatc 59
|||||||||||||||||||||||||||||||| ||||||| ||| | ||| | ||||
Sbjct: 11 cgcctcgggctcgcttggtgcagatcgggacctgccgccg-tgctcggacgggacagatc 69
Query: 60 ccgccttgcaccaagtgaatcggagccg 87
||||||||||||||||||||| ||||||
Sbjct: 70 ccgccttgcaccaagtgaatccgagccg 97
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 ggatcccgccttgcaccaagtgaatcggag 84
||||||||||||||| ||| ||||||||||
Sbjct: 106 ggatcccgccttgcatcaactgaatcggag 135
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 ggatcccgccttgcaccaagtgaatcggag 84
||||||||||||||| ||| ||||||||||
Sbjct: 130 ggatcccgccttgcatcaactgaatcggag 159
>41215_crt-MIR168:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 ggatcccgccttgcaccaagtgaatcggag 84
||||||||||||||| ||| ||||||||||
Sbjct: 139 ggatcccgccttgcatcaactgaatcggag 168
>41210_ccl-MIR168:mirbase
Length = 176
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 ggatcccgccttgcaccaagtgaatcggag 84
||||||||||||||| ||| ||||||||||
Sbjct: 138 ggatcccgccttgcatcaactgaatcggag 167
>41101_tcc-MIR168:mirbase
Length = 167
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 ggatcccgccttgcaccaagtgaatcggag 84
||||||||||||||| ||| ||||||||||
Sbjct: 123 ggatcccgccttgcatcaactgaatcggag 152
>40448_gma-MIR168:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 ggatcccgccttgcaccaagtgaatcggag 84
||||||||||||||| ||| ||||||||||
Sbjct: 84 ggatcccgccttgcatcaactgaatcggag 113
>41596_vvi-MIR168:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 56 gatcccgccttgcaccaagtgaatcggag 84
|||||||||||||| ||| ||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
>40043_ath-MIR168a:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 55 ggatcccgccttgcaccaagtgaatcgga 83
||||||||||||||| ||| |||||||||
Sbjct: 99 ggatcccgccttgcatcaactgaatcgga 127
>39832_aly-MIR168a:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 55 ggatcccgccttgcaccaagtgaatcgga 83
||||||||||||||| ||| |||||||||
Sbjct: 105 ggatcccgccttgcatcaactgaatcgga 133
>40355_rco-MIR168:mirbase
Length = 131
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 55 ggatcccgccttgcaccaagtgaatcg 81
||||||||||||||| ||| |||||||
Sbjct: 102 ggatcccgccttgcatcaactgaatcg 128
>40271_bna-MIR168:mirbase
Length = 133
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 54 cggatcccgccttgcaccaagtgaatc 80
|||||||||||||| | ||||||||||
Sbjct: 93 cggatcccgccttgtatcaagtgaatc 119
