miRNEST 2.0, an integrative microRNA resource :: BLAST
>42774_zma-MIR171n:mirbase
Length = 78
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 11 atattggtgaggttcaatccgatgattggttttacagcagtggtaaaatcagtatctgat 70
|||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||
Sbjct: 1 atattggtgaggttcaatccgatgttaggttttacaaaagctgtaaaatcagtatctgat 60
Query: 71 tgagccgcgccaatatct 88
||||||||||||||||||
Sbjct: 61 tgagccgcgccaatatct 78
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 105 bits (53), Expect = 6e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 12 tattggtgaggttcaatccgatgattggttttacag-cagtggtaaaatcagtatctgat 70
||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 1 tattggtgaggttcaatccgatgataggttttacaaacagctgtaaaatcagtatctgat 60
Query: 71 tgagccgcgccaatatc 87
|||||||||||||||||
Sbjct: 61 tgagccgcgccaatatc 77
>40322_bra-MIR171e:mirbase
Length = 119
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 tatctgattgagccgcgccaatatctc 89
|||||||||||||||||||||||||||
Sbjct: 80 tatctgattgagccgcgccaatatctc 106
>40291_bna-MIR171g:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 tatctgattgagccgcgccaatatctc 89
|||||||||||||||||||||||||||
Sbjct: 54 tatctgattgagccgcgccaatatctc 80
>40290_bna-MIR171f:mirbase
Length = 119
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 tatctgattgagccgcgccaatatctc 89
|||||||||||||||||||||||||||
Sbjct: 80 tatctgattgagccgcgccaatatctc 106
>40060_ath-MIR171a:mirbase
Length = 123
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 tatctgattgagccgcgccaatatctc 89
|||||||||||||||||||||||||||
Sbjct: 84 tatctgattgagccgcgccaatatctc 110
>39849_aly-MIR171a:mirbase
Length = 198
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 tatctgattgagccgcgccaatatctc 89
|||||||||||||||||||||||||||
Sbjct: 126 tatctgattgagccgcgccaatatctc 152
>42761_zma-MIR171a:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 cagtatctgattgagccgcgccaatatc 87
|||| |||||||||||||||||||||||
Sbjct: 72 cagtgtctgattgagccgcgccaatatc 99
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 gagcgatattggtgaggttcaatc 29
||||||||||||||||||||||||
Sbjct: 3 gagcgatattggtgaggttcaatc 26
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 ctgattgagccgcgccaatatctcttc 92
|||||||||||||||||||||| ||||
Sbjct: 82 ctgattgagccgcgccaatatcacttc 108
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgcgccaatatctct 90
||||||||||||||||||||||||
Sbjct: 50 tgattgagccgcgccaatatctct 73
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatc 87
|||||||||||||||||||||||
Sbjct: 68 tctgattgagccgcgccaatatc 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 agcgatattggtgaggttcaatccga 32
|||||| |||||||||||||||||||
Sbjct: 9 agcgatgttggtgaggttcaatccga 34
>41541_sly-MIR171d:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 agcgatattggtgaggttcaatccga 32
|||||| |||||||||||||||||||
Sbjct: 9 agcgatgttggtgaggttcaatccga 34
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatctcttc 92
|||||||||||||||||||| ||||
Sbjct: 73 gattgagccgcgccaatatcacttc 97
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 agcgatattggtgaggttcaatccga 32
|||||| |||||||||||||||||||
Sbjct: 8 agcgatgttggtgaggttcaatccga 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 72 gattgagccgcgccaatatc 91
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 agcgatattggtgaggttcaatccga 32
|||||| |||||||||||||||||||
Sbjct: 8 agcgatgttggtgaggttcaatccga 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 76 gattgagccgcgccaatatc 95
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 agcgatattggtgaggttcaatccga 32
|||||| |||||||||||||||||||
Sbjct: 16 agcgatgttggtgaggttcaatccga 41
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatc 103
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgcgccaatatct 88
||||||||||||||||||||||
Sbjct: 79 tgattgagccgcgccaatatct 100
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 agcgatattggtgaggttcaatccga 32
|||||| |||||||||||||||||||
Sbjct: 3 agcgatgttggtgaggttcaatccga 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 69 gattgagccgcgccaatatc 88
>40365_rco-MIR171g:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 agcgatattggtgaggttcaatccga 32
|||||| |||||||||||||||||||
Sbjct: 1 agcgatgttggtgaggttcaatccga 26
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatc 84
>42764_zma-MIR171d:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatctc 89
||||||||||||| |||||||||||
Sbjct: 80 tctgattgagccgtgccaatatctc 104
>42640_tae-MIR171a:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatctc 89
||||||||||||| |||||||||||
Sbjct: 87 tctgattgagccgtgccaatatctc 111
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatctc 89
||||||||||||| |||||||||||
Sbjct: 112 tctgattgagccgtgccaatatctc 136
>41984_osa-MIR171d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatctc 89
||||||||||||| |||||||||||
Sbjct: 103 tctgattgagccgtgccaatatctc 127
>41540_sly-MIR171c:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgcgccaatatc 87
|||||||||||||||||||||
Sbjct: 78 tgattgagccgcgccaatatc 98
>41231_csi-MIR171a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgcgccaatatc 87
|||||||||||||||||||||
Sbjct: 67 tgattgagccgcgccaatatc 87
>41211_ccl-MIR171:mirbase
Length = 321
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tgattgagccgcgccaatatc 87
|||||||||||||||||||||
Sbjct: 122 tgattgagccgcgccaatatc 142
>42765_zma-MIR171e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatct 88
||||||||||||| ||||||||||
Sbjct: 85 tctgattgagccgtgccaatatct 108
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatct 88
||||||||||||| ||||||||||
Sbjct: 66 tctgattgagccgtgccaatatct 89
>41985_osa-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatct 88
||||||||||||| ||||||||||
Sbjct: 87 tctgattgagccgtgccaatatct 110
>41890_hvu-MIR171:mirbase
Length = 173
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatct 88
||||||||||||| ||||||||||
Sbjct: 110 tctgattgagccgtgccaatatct 133
>41874_far-MIR171:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 atctgattgagccgcgccaatatc 87
|||||||||||||| |||||||||
Sbjct: 87 atctgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 atctgattgagccgcgccaatatc 87
|||||||||||||| |||||||||
Sbjct: 111 atctgattgagccgtgccaatatc 134
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 atctgattgagccgcgccaatatc 87
|||||||||||||| |||||||||
Sbjct: 66 atctgattgagccgtgccaatatc 89
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 7 agcgatattggtgaggttcaatccgatgattg 38
|||||| |||||||||||||||| || |||||
Sbjct: 9 agcgatgttggtgaggttcaatctgaagattg 40
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 71 gattgagccgcgccaatatc 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 atctgattgagccgcgccaatatc 87
|||||||||||||| |||||||||
Sbjct: 65 atctgattgagccgtgccaatatc 88
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 atctgattgagccgcgccaatatc 87
|||||||||||||| |||||||||
Sbjct: 68 atctgattgagccgtgccaatatc 91
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 atctgattgagccgcgccaatatc 87
|||||||||||||| |||||||||
Sbjct: 68 atctgattgagccgtgccaatatc 91
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatct 88
||||||||||||| ||||||||||
Sbjct: 99 tctgattgagccgtgccaatatct 122
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 atctgattgagccgcgccaatatc 87
|||||||||||||| |||||||||
Sbjct: 62 atctgattgagccgtgccaatatc 85
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 atctgattgagccgcgccaatatc 87
|||||||||||||| |||||||||
Sbjct: 52 atctgattgagccgtgccaatatc 75
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 65 tctgattgagccgcgccaatatct 88
||||||||||||| ||||||||||
Sbjct: 93 tctgattgagccgtgccaatatct 116
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 81 gattgagccgcgccaatatc 100
>40363_rco-MIR171e:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 atctgattgagccgcgccaatatc 87
|||||||||||||| |||||||||
Sbjct: 56 atctgattgagccgtgccaatatc 79
>40361_rco-MIR171c:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 atctgattgagccgcgccaatatc 87
|||||||||||||| |||||||||
Sbjct: 59 atctgattgagccgtgccaatatc 82
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatc 84
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 64 gattgagccgcgccaatatc 83
