miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42085_osa-MIR444c:mirbase
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 agttgctgcaagtggaggcggcaagctagagacagcaactgcatatcttgcaagaaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttgctgcaagtggaggcggcaagctagagacagcaactgcatatcttgcaagaaaatc 60
Query: 61 ggttttatggccataccgatgattttcttgcaagctgtgcagttgttgtctcaagcttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggttttatggccataccgatgattttcttgcaagctgtgcagttgttgtctcaagcttgc 120
Query: 121 tgcctccctttgccagaa 138
||||||||||||||||||
Sbjct: 121 tgcctccctttgccagaa 138
Score = 67.9 bits (34), Expect = 2e-12
Identities = 94/114 (82%)
Strand = Plus / Minus
Query: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaaatcggttttatggcca 73
|||||| ||||||| |||||| |||||||| | |||||||||||||| ||||||||
Sbjct: 127 ggaggcagcaagcttgagacaacaactgcacagcttgcaagaaaatcatcggtatggcca 68
Query: 74 taccgatgattttcttgcaagctgtgcagttgttgtctcaagcttgctgcctcc 127
|| |||||||||||||| | |||||||| |||||| ||||||| ||||||
Sbjct: 67 taaaaccgattttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 141 bits (71), Expect = 2e-34
Identities = 95/103 (92%)
Strand = Plus / Plus
Query: 22 caagctagagacagcaactgcatatcttgcaagaaaatcggttttatggccataccgatg 81
|||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 6 caagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgata 65
Query: 82 attttcttgcaagctgtgcagttgttgtctcaagcttgctgcc 124
||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 66 attttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 21 gcaagctagagacagcaactgcatatcttgcaagaaaat 59
||||||| |||||| |||||||| | |||||||||||||
Sbjct: 104 gcaagcttgagacaacaactgcacaacttgcaagaaaat 66
>42084_osa-MIR444b:mirbase
Length = 138
Score = 123 bits (62), Expect = 4e-29
Identities = 97/109 (88%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 33 cagcaactgcatatcttgcaagaaaatc------ggttttatggccataccgatgatttt 86
||||||||||| |||||||||||||||| | |||| | ||||||||||||||||
Sbjct: 29 cagcaactgcacatcttgcaagaaaatctttagggtttttcagaccataccgatgatttt 88
Query: 87 cttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgcca 135
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 cttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcca 137
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaaatc 60
|||||| ||||||| |||||| |||||||| | ||||||||||||||
Sbjct: 129 ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaatc 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 81 gattttcttgcaagctgtgcagttgttgtctcaagcttg 119
|||||||||||||| |||||||||| || | ||||||||
Sbjct: 56 gattttcttgcaagatgtgcagttgctgccacaagcttg 18
>42083_osa-MIR444b:mirbase
Length = 138
Score = 123 bits (62), Expect = 4e-29
Identities = 97/109 (88%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 33 cagcaactgcatatcttgcaagaaaatc------ggttttatggccataccgatgatttt 86
||||||||||| |||||||||||||||| | |||| | ||||||||||||||||
Sbjct: 29 cagcaactgcacatcttgcaagaaaatctttagggtttttcagaccataccgatgatttt 88
Query: 87 cttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgcca 135
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 cttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcca 137
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaaatc 60
|||||| ||||||| |||||| |||||||| | ||||||||||||||
Sbjct: 129 ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaatc 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 81 gattttcttgcaagctgtgcagttgttgtctcaagcttg 119
|||||||||||||| |||||||||| || | ||||||||
Sbjct: 56 gattttcttgcaagatgtgcagttgctgccacaagcttg 18
>42091_osa-MIR444f:mirbase
Length = 154
Score = 73.8 bits (37), Expect = 3e-14
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 79 atgattttcttgcaagctgtgcagttgttgtctcaagcttgctgcctcc 127
|||| ||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 105 atgactttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaa 57
|||||| ||||||| ||| || |||||||| | |||||||||||
Sbjct: 153 ggaggcagcaagcttgaggcaacaactgcacaacttgcaagaaa 110
>42089_osa-MIR444d:mirbase
Length = 143
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgcca 135
||||||||||| |||||||||| || |||||||||||||||||||| |||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgcca 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaa 57
|||||| ||||||| ||| ||||||||||| | |||||||||||
Sbjct: 132 ggaggcagcaagcttgaggcagcaactgcacaacttgcaagaaa 89
>42088_osa-MIR444d:mirbase
Length = 143
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgcca 135
||||||||||| |||||||||| || |||||||||||||||||||| |||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgcca 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaa 57
|||||| ||||||| ||| ||||||||||| | |||||||||||
Sbjct: 132 ggaggcagcaagcttgaggcagcaactgcacaacttgcaagaaa 89
>42087_osa-MIR444d:mirbase
Length = 143
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgcca 135
||||||||||| |||||||||| || |||||||||||||||||||| |||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgcca 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaa 57
|||||| ||||||| ||| ||||||||||| | |||||||||||
Sbjct: 132 ggaggcagcaagcttgaggcagcaactgcacaacttgcaagaaa 89
>42082_osa-MIR444a:mirbase
Length = 131
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 72 cataccgatgattttcttgcaagctgtgcagttgttgtctcaagcttgctgcctcc 127
|||||||||||| |||||||||| | |||||||| || ||||||||||||||||||
Sbjct: 68 cataccgatgatattcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaa 56
|||||| ||||||| ||| ||||||||||||| ||||||||||
Sbjct: 123 ggaggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 72 cataccgatgattttcttgcaagctgtgcagttgttgtctcaagcttgctgcctcc 127
|||||||||||| |||||||||| | |||||||| || ||||||||||||||||||
Sbjct: 68 cataccgatgatattcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaa 56
|||||| ||||||| ||| ||||||||||||| ||||||||||
Sbjct: 123 ggaggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>42648_tae-MIR444:mirbase
Length = 426
Score = 63.9 bits (32), Expect = 3e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgcca 135
||||||||||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgcca 185
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaa 57
|||||| ||||||| ||| |||||||||||| |||||||||||
Sbjct: 177 ggaggcagcaagcttgaggcagcaactgcatgacttgcaagaaa 134
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctcc 127
||||||||||| |||||||||| |||||||||||||||| ||||
Sbjct: 78 tttcttgcaagttgtgcagttgctgtctcaagcttgctgactcc 121
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 21 gcaagctagagacagcaactgcatatcttgcaagaaa 57
||||||| ||||||||||||||| | |||||||||||
Sbjct: 114 gcaagcttgagacagcaactgcacaacttgcaagaaa 78
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 83 ttttcttgcaagctgtgcagttgttgtctcaagcttg 119
|||||||||||| ||||||||||||| ||||||||||
Sbjct: 69 ttttcttgcaagttgtgcagttgttgcctcaagcttg 105
>42649_tae-MIR444b:mirbase
Length = 162
Score = 56.0 bits (28), Expect = 7e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctcc 127
||||||||||| ||||||||| || ||||||||||||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 12 gtggaggcggcaagctagagacagcaactgcatatcttgcaagaaa 57
|||||||| ||||||| ||| ||||||||||| |||||||||||
Sbjct: 155 gtggaggcagcaagcttgaggcagcaactgcacgacttgcaagaaa 110
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 84 tttcttgcaagctgtgcagttgttgtctcaagcttg 119
||||||||||| ||||||||||||| ||||||||||
Sbjct: 71 tttcttgcaagttgtgcagttgttgcctcaagcttg 106
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcct 125
||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
