miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42144_osa-MIR812g:mirbase
          Length = 242

 Score = 97.6 bits (49), Expect = 3e-21
 Identities = 100/115 (86%), Gaps = 4/115 (3%)
 Strand = Plus / Minus

                                                                       
Query: 4   tactccctccgtcccattttaagtgcaatcatgagtttc---gcccaactttaatcatct 60
           |||||||| ||||||||||||||| |||  |||||||||   | ||||||||||||||| 
Sbjct: 237 tactcccttcgtcccattttaagtacaactatgagtttccatgtccaactttaatcatcc 178

                                                                  
Query: 61  gttttatttgaacttttt-ataaatagtatttttattgttatgagattataaaat 114
           || |||||| || ||||| |||| ||||||||||||||||||||||| |||||||
Sbjct: 177 gtcttatttaaatttttttataattagtatttttattgttatgagataataaaat 123



 Score = 75.8 bits (38), Expect = 1e-14
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                         
Query: 110 aaaatttaaataagacggatgattaaagttggacacgaaaactcat 155
           ||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 162 aaaatttaaataagacggatgattaaagttggacatggaaactcat 207



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 114 tttaaataagacggatgattaaagttg 140
           ||||||||||||||| |||||||||||
Sbjct: 80  tttaaataagacggacgattaaagttg 54




>42146_osa-MIR812i:mirbase
          Length = 242

 Score = 79.8 bits (40), Expect = 7e-16
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                       
Query: 116 taaataagacggatgattaaagttggacacgaaaactcatggct 159
           ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 168 taaataagacggatgattaaagttggacacgaaaactcagggct 211




>42147_osa-MIR812j:mirbase
          Length = 297

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                      
Query: 117 aaataagacggatgattaaagttggacacgaaaactcatggct 159
           |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 196 aaataagacggatgattaaagttggacacggaaactcatggct 238



 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 63/71 (88%), Gaps = 2/71 (2%)
 Strand = Plus / Minus

                                                                       
Query: 45  ccaactttaatcatctgttttatttgaactttttata--aatagtatttttattgttatg 102
           ||||||||||||||| || ||||||||| ||||| ||  | |||||||||||||||||| 
Sbjct: 220 ccaactttaatcatccgtcttatttgaaatttttgtatgattagtatttttattgttatt 161

                      
Query: 103 agattataaaa 113
           |||||||||||
Sbjct: 160 agattataaaa 150



 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 110 aaaatttaaataagacggatgattaaagttggacacgaaaactcatggctacactta 166
           |||| |||||||||||| |  |||||||||||||| |||||||||||||||| ||||
Sbjct: 101 aaaaattaaataagacgaacaattaaagttggacaagaaaactcatggctacgctta 45




>42143_osa-MIR812f:mirbase
          Length = 179

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 110 aaaatttaaataagacggatgattaaagttggacacgaaaactcatgg 157
           |||| |||||||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 132 aaaaattaaataaaacggatgattaaagttggacacggaaattcatgg 179



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 74  tttttataaatagtatttttattgttatgagattataaaa 113
           ||||||| | || ||||||||||||||| |||||||||||
Sbjct: 45  tttttatgattaatatttttattgttattagattataaaa 84



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 45  ccaactttaatcatctgttttattt 69
           ||||||||||||||| |||||||||
Sbjct: 163 ccaactttaatcatccgttttattt 139




>42150_osa-MIR812m:mirbase
          Length = 188

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 65/76 (85%), Gaps = 3/76 (3%)
 Strand = Plus / Plus

                                                                       
Query: 42  cgcccaactttaatcatctgttttatttgaacttttt--ataaatagtattttta-ttgt 98
           ||||||||||| ||| || || ||||||||| |||||  |||| ||||||||||  ||||
Sbjct: 16  cgcccaactttgatcgtccgtcttatttgaaatttttttataattagtattttttgttgt 75

                           
Query: 99  tatgagattataaaat 114
           |||||||| |||||||
Sbjct: 76  tatgagataataaaat 91




>42148_osa-MIR812k:mirbase
          Length = 226

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 74  tttttataaatagtatttttattgttatgagattataaaa 113
           ||||||||| ||| |||||| |||||||||||| ||||||
Sbjct: 70  tttttataattagcatttttgttgttatgagatgataaaa 109



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 118 aataagacggatgattaaagttggacacgaaaactcatggctacactta 166
           ||||||||| | | |||||||||||| || |||  ||||||||||||||
Sbjct: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacactta 213




>42142_osa-MIR812e:mirbase
          Length = 170

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 87  tatttttattgttatgagattataaaatttaaata 121
           ||||||||||||||| |||| ||||||| ||||||
Sbjct: 53  tatttttattgttattagatgataaaatataaata 87




>42152_osa-MIR812n:mirbase
          Length = 203

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 133 taaagttggacacgaaaactcatggctacactta 166
           ||||||||| |||| |||||||||||| ||||||
Sbjct: 36  taaagttgggcacggaaactcatggctgcactta 3




>42151_osa-MIR812n:mirbase
          Length = 203

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 133 taaagttggacacgaaaactcatggctacactta 166
           ||||||||| |||| |||||||||||| ||||||
Sbjct: 36  taaagttgggcacggaaactcatggctgcactta 3




>42139_osa-MIR812b:mirbase
          Length = 170

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 84  tagtatttttattgttatgagattataaaa 113
           |||||||||||||||||| |||| ||||||
Sbjct: 118 tagtatttttattgttattagatgataaaa 89




>42149_osa-MIR812l:mirbase
          Length = 242

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 3  gtactccctccgtcccattttaagtgcaa 31
          ||||| ||||||||| |||||||||||||
Sbjct: 2  gtacttcctccgtcctattttaagtgcaa 30