miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42152_osa-MIR812n:mirbase
Length = 203
Score = 313 bits (158), Expect = 3e-86
Identities = 188/203 (92%)
Strand = Plus / Plus
Query: 1 cttaagtgcagccatgagtttccgtgcccaactttatcgttcgtcttatttgaaannnnn 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttaagtgcagccatgagtttccgtgcccaactttatcgttcgtcttatttgaaattttt 60
Query: 61 nnatgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtga 120
Query: 121 cttatgtttttattgtttttnnnnnnnnttcaaataacacagacgatcaaagttgggcac 180
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 cttatgtttttattgtttttaaaaaaaattcaaataacacagacgatcaaagttgggcac 180
Query: 181 ggaaaatcatggctgcacttaaa 203
|||||||||||||||||||||||
Sbjct: 181 ggaaaatcatggctgcacttaaa 203
Score = 60.0 bits (30), Expect = 7e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 169 aaagttgggcacggaaaatcatggctgcacttaa 202
||||||||||||||||| ||||||||||||||||
Sbjct: 35 aaagttgggcacggaaactcatggctgcacttaa 2
Score = 60.0 bits (30), Expect = 7e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 2 ttaagtgcagccatgagtttccgtgcccaacttt 35
|||||||||||||||| |||||||||||||||||
Sbjct: 202 ttaagtgcagccatgattttccgtgcccaacttt 169
>42147_osa-MIR812j:mirbase
Length = 297
Score = 127 bits (64), Expect = 4e-30
Identities = 109/125 (87%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 8 gcagccatgagtttccgtgcccaacttta-tcgttcgtcttatttgaaannnnnnnatga 66
||||||||||||||||||| ||||||||| || | |||||||||||||| ||||
Sbjct: 240 gcagccatgagtttccgtgtccaactttaatcatccgtcttatttgaaatttttgtatga 181
Query: 67 ttagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttatg 126
||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||| ||
Sbjct: 180 ttagtatttttattgttattagattataaaacatgaatagtagtttatgcgtgacttgtg 121
Query: 127 ttttt 131
|||||
Sbjct: 120 ttttt 116
>42148_osa-MIR812k:mirbase
Length = 226
Score = 115 bits (58), Expect = 1e-26
Identities = 112/131 (85%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 3 taagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnn 61
|||||||||||||||||||||| || ||| ||| ||||| ||||||||||||||
Sbjct: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaatttttt 73
Query: 62 natgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgac 121
|| ||||| |||| | ||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 74 tataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgac 133
Query: 122 ttatgttttta 132
|||||||||||
Sbjct: 134 ttatgttttta 144
Score = 58.0 bits (29), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 149 ttcaaataacacagacgatcaaagttgggcacggaaaatcatggctgcactta 201
||||||||| || |||||||||| ||| || |||||| |||||||||||||||
Sbjct: 66 ttcaaataagacggacgatcaaaattgagcgcggaaactcatggctgcactta 14
>42138_osa-MIR812a:mirbase
Length = 234
Score = 103 bits (52), Expect = 5e-23
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 36 atcgttcgtcttatttgaaannnnnnnatgattagtatttctattgttattagatgataa 95
|||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||
Sbjct: 52 atcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatgataa 111
Query: 96 aacatgaatagtactttatgtgtgacttatgttttta 132
||||||||||||| ||||||||||||| || ||||||
Sbjct: 112 aacatgaatagtattttatgtgtgactaattttttta 148
>42139_osa-MIR812b:mirbase
Length = 170
Score = 95.6 bits (48), Expect = 1e-20
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 123 atgattagtatttttattgttattagatgataaaacatgaatattactttatgcgtgact 64
>42143_osa-MIR812f:mirbase
Length = 179
Score = 91.7 bits (46), Expect = 2e-19
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 50 atgattaatatttttattgttattagattataaaacacaaatagtactttatgtgtgact 109
Query: 123 tatgtt 128
||||||
Sbjct: 110 tatgtt 115
>42141_osa-MIR812d:mirbase
Length = 153
Score = 81.8 bits (41), Expect = 2e-16
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 63 atgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgact 122
||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||| ||||||
Sbjct: 113 atgattagtatttttattgttcttatatgataaaacatgaataatactttatgcgtgact 54
Query: 123 t 123
|
Sbjct: 53 t 53
>42154_osa-MIR812o:mirbase
Length = 173
Score = 77.8 bits (39), Expect = 3e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| |||| || ||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
Query: 126 gttttta 132
||||||
Sbjct: 110 cttttta 116
>42153_osa-MIR812o:mirbase
Length = 173
Score = 77.8 bits (39), Expect = 3e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||||||||| |||| || ||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
Query: 126 gttttta 132
||||||
Sbjct: 110 cttttta 116
>42150_osa-MIR812m:mirbase
Length = 188
Score = 73.8 bits (37), Expect = 5e-14
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 17 agtttccgtgcccaacttt-atcgttcgtcttatttgaaannnnnnnatgattagtattt 75
|||||||| |||||||||| ||||| |||||||||||||| || ||||||||||
Sbjct: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaatttttttataattagtattt 67
Query: 76 cta-ttgttattagatgataaaacatgaatagtactttatgtgtgacttatgttttta 132
| ||||||| |||| |||||| ||||||||||||||| ||||||||||||||||
Sbjct: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatgttttta 125
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 149 ttcaaataacacagacgatcaaagttgggcacggaaa 185
||||||||| || ||||||||||||||||| ||||||
Sbjct: 46 ttcaaataagacggacgatcaaagttgggcgcggaaa 10
>42149_osa-MIR812l:mirbase
Length = 242
Score = 65.9 bits (33), Expect = 1e-11
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
|||| ||||| | ||||||| ||||||||||||||| |||||| |||| | |||||||||
Sbjct: 85 attaatatttttgttgttataagatgataaaacatgcatagtattttacgcgtgacttat 144
Query: 126 gtttt 130
|||||
Sbjct: 145 gtttt 149
>42142_osa-MIR812e:mirbase
Length = 170
Score = 61.9 bits (31), Expect = 2e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgactta 124
|||| ||||| ||||||||||||||||||||| || |||| ||||| ||| ||||||||
Sbjct: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 149 ttcaaataacacagacgatcaaagttgggcac 180
||||||||| || |||| ||||||||||||||
Sbjct: 38 ttcaaataagacggacggtcaaagttgggcac 7
>42140_osa-MIR812c:mirbase
Length = 164
Score = 56.0 bits (28), Expect = 1e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 89 atgataaaacatgaatagtactttatgtgtgacttatgttttta 132
||||||||||||||||| || |||||| |||||||||||||||
Sbjct: 90 atgataaaacatgaataatattttatgcatgacttatgttttta 47
>42144_osa-MIR812g:mirbase
Length = 242
Score = 52.0 bits (26), Expect = 2e-07
Identities = 59/69 (85%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 66 attagtatttctattgttattagatgataaaacatgaatagta--ctttatgtgtgactt 123
|||||||||| ||||||||| |||| |||||| |||||||||| ||||| ||||||
Sbjct: 155 attagtatttttattgttatgagataataaaatatgaatagtatactttactcatgactt 96
Query: 124 atgttttta 132
|||||||||
Sbjct: 95 atgttttta 87
Score = 48.1 bits (24), Expect = 3e-06
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 152 aaataacacagacgatcaaagttgggcacggaaaatcatggctgcacttaaa 203
|||||| || |||||| ||||||| || || |||| ||||||||||||||||
Sbjct: 77 aaataagacggacgattaaagttgagcgcgtaaaaccatggctgcacttaaa 26
>42146_osa-MIR812i:mirbase
Length = 242
Score = 48.1 bits (24), Expect = 3e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 82 ttattagatgataaaacatgaatagtactttatgtgtgacttat 125
||||||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 99 ttattagattgtaaaacatgaatattactttatgcatgacttat 142
>42145_osa-MIR812h:mirbase
Length = 187
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 taagtgcagccatgagtttccgtgcccaacttta 36
|||||| |||||||||||| |||| |||||||||
Sbjct: 166 taagtgtagccatgagttttcgtgtccaacttta 133
