miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42154_osa-MIR812o:mirbase
Length = 173
Score = 176 bits (89), Expect = 4e-45
Identities = 103/110 (93%)
Strand = Plus / Plus
Query: 1 ggttttcgtgttcaacgtttgactgtctatcttatatgaaaannnnnnnattagtatttt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 ggttttcgtgttcaacgtttgactgtctatcttatatgaaaatttttttattagtatttt 60
Query: 61 tattattgttagatgataaaacatgaataatactttatgcatgacttatc 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tattattgttagatgataaaacatgaataatactttatgcatgacttatc 110
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 137 aaataaaatgaacggtcaaatgttagacacggaaact 173
|||||||||||||||||||||||||||||||||||||
Sbjct: 137 aaataaaatgaacggtcaaatgttagacacggaaact 173
>42141_osa-MIR812d:mirbase
Length = 153
Score = 83.8 bits (42), Expect = 4e-17
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgactt 107
||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||||
Sbjct: 110 attagtatttttattgttcttatatgataaaacatgaataatactttatgcgtgactt 53
>42140_osa-MIR812c:mirbase
Length = 164
Score = 83.8 bits (42), Expect = 4e-17
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 60 ttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
|||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 103 ttattattgttaaatgataaaacatgaataatattttatgcatgacttat 54
>42139_osa-MIR812b:mirbase
Length = 170
Score = 81.8 bits (41), Expect = 2e-16
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgact 106
||||||||||||||| || ||||||||||||||||||||| |||||||||| |||||
Sbjct: 120 attagtatttttattgttattagatgataaaacatgaatattactttatgcgtgact 64
>42152_osa-MIR812n:mirbase
Length = 203
Score = 71.9 bits (36), Expect = 2e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
|||||||||| |||| || ||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
>42151_osa-MIR812n:mirbase
Length = 203
Score = 71.9 bits (36), Expect = 2e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
|||||||||| |||| || ||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 66 attagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttat 125
>42147_osa-MIR812j:mirbase
Length = 297
Score = 67.9 bits (34), Expect = 2e-12
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgactt 107
||||||||||||||| || |||||| |||||||||||||| || ||||||| ||||||
Sbjct: 181 attagtatttttattgttattagattataaaacatgaatagtagtttatgcgtgactt 124
>42146_osa-MIR812i:mirbase
Length = 242
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 77 taaaacatgaataatactttatgcatgacttat 109
||||||||||||| |||||||||||||||||||
Sbjct: 110 taaaacatgaatattactttatgcatgacttat 142
>42142_osa-MIR812e:mirbase
Length = 170
Score = 54.0 bits (27), Expect = 4e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgactta 108
|||| |||||||||| || ||||||||||||| || |||| ||||| |||| |||||||
Sbjct: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
>42138_osa-MIR812a:mirbase
Length = 234
Score = 52.0 bits (26), Expect = 1e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatg 99
|||| |||||||||| || ||| ||||||||||||||||| || ||||||
Sbjct: 82 attactatttttattgttattacatgataaaacatgaatagtattttatg 131
>42148_osa-MIR812k:mirbase
Length = 226
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatacttta 97
||||| |||||| || || | ||||||||||||||||||| |||||||
Sbjct: 78 attagcatttttgttgttatgagatgataaaacatgaatagtacttta 125
>42144_osa-MIR812g:mirbase
Length = 242
Score = 46.1 bits (23), Expect = 9e-06
Identities = 53/62 (85%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatgaata--atactttatgcatgactt 107
||||||||||||||| || | |||| |||||| ||||||| |||||||| ||||||||
Sbjct: 155 attagtatttttattgttatgagataataaaatatgaatagtatactttactcatgactt 96
Query: 108 at 109
||
Sbjct: 95 at 94
>42149_osa-MIR812l:mirbase
Length = 242
Score = 40.1 bits (20), Expect = 5e-04
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
|||| ||||||| || || | ||||||||||||||| ||| || |||| || ||||||||
Sbjct: 85 attaatatttttgttgttataagatgataaaacatgcatagtattttacgcgtgacttat 144
