miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41233_csi-MIR172a:mirbase
Length = 162
Score = 210 bits (106), Expect = 2e-55
Identities = 139/150 (92%)
Strand = Plus / Plus
Query: 1 ttaaaacagtcattgctcgctggagcagcgacctcaagattcacatccggtctagaggca 60
||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||| |||||
Sbjct: 7 ttaaaacagtcgttgctcgctgtagcagcgtcctcaagattcacatccagtctaaaggca 66
Query: 61 aaagcaacaatttttcttcatttttgcttgccttggcttttgtcatggagaatcttgatg 120
|||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 67 aaagcagcaatttttcttcatttttgcttgccttggtttttgtcagtgagaatcttgatg 126
Query: 121 atgctgcaacggggattagtgactagctac 150
|||||||||||| ||||| |||||||||||
Sbjct: 127 atgctgcaacggcgattaatgactagctac 156
>41234_csi-MIR172b:mirbase
Length = 127
Score = 143 bits (72), Expect = 4e-35
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 13 ttgctcgctggagcagcgacctcaagattcacatccggtctagaggcaaaagcaacaatt 72
|||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 1 ttgctcgctgtagcagcgacgtcaagattcacatccagtctaaaggcaaaagcagcaatt 60
Query: 73 tttcttcatttttgcttgccttggcttttgtcatggagaatcttgatgatgctgcaacgg 132
|||||||| ||| |||||||| || |||||||| ||||||||||||||||| |||||||
Sbjct: 61 tttcttcagtttggcttgcctgggtttttgtcagtgagaatcttgatgatgcggcaacgg 120
>42778_zma-MIR172d:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 53 gagaatcttgatgatgctgca 73
>42777_zma-MIR172c:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 102 gagaatcttgatgatgctgca 122
>42776_zma-MIR172b:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 105 gagaatcttgatgatgctgca 125
>42775_zma-MIR172a:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 62 gagaatcttgatgatgctgca 82
>42560_sbi-MIR172d:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 67 gagaatcttgatgatgctgca 87
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 98 gagaatcttgatgatgctgca 118
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 81 gagaatcttgatgatgctgca 101
>41993_osa-MIR172d:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 90 gagaatcttgatgatgctgca 110
>41990_osa-MIR172a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 78 gagaatcttgatgatgctgca 98
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 98 gagaatcttgatgatgctgca 118
>41725_ata-MIR172:mirbase
Length = 277
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 208 gagaatcttgatgatgctgca 228
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 78 gagaatcttgatgatgctgca 98
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 30 gagaatcttgatgatgctgca 10
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 30 gagaatcttgatgatgctgca 10
>41543_sly-MIR172b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 114 gagaatcttgatgatgctgca 134
>41542_sly-MIR172a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 85 gagaatcttgatgatgctgca 105
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 131 gagaatcttgatgatgctgca 151
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 98 gagaatcttgatgatgctgca 118
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 110 gagaatcttgatgatgctgca 130
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 99 gagaatcttgatgatgctgca 119
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 97 gagaatcttgatgatgctgca 117
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 148 gagaatcttgatgatgctgca 168
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 119 gagaatcttgatgatgctgca 139
>40463_gma-MIR172f:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 108 gagaatcttgatgatgctgca 128
>40459_gma-MIR172b:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 113 gagaatcttgatgatgctgca 133
>40458_gma-MIR172a:mirbase
Length = 159
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 119 gagaatcttgatgatgctgca 139
>40324_bra-MIR172b:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 81 gagaatcttgatgatgctgca 101
>40323_bra-MIR172a:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 86 gagaatcttgatgatgctgca 106
>40307_bol-MIR172b:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 81 gagaatcttgatgatgctgca 101
>40306_bol-MIR172a:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 86 gagaatcttgatgatgctgca 106
>40066_ath-MIR172d:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 87 gagaatcttgatgatgctgca 107
>40065_ath-MIR172c:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 97 gagaatcttgatgatgctgca 117
>40064_ath-MIR172b:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 70 gagaatcttgatgatgctgca 90
>40063_ath-MIR172a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 77 gagaatcttgatgatgctgca 97
>39855_aly-MIR172d:mirbase
Length = 163
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 111 gagaatcttgatgatgctgca 131
>39854_aly-MIR172c:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 97 gagaatcttgatgatgctgca 117
>39853_aly-MIR172b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 92 gagaatcttgatgatgctgca 112
>39852_aly-MIR172a:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 gagaatcttgatgatgctgca 128
|||||||||||||||||||||
Sbjct: 98 gagaatcttgatgatgctgca 118
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 110 gaatcttgatgatgctgcaacggggattagtgacta 145
||||||||||||||||||| ||| || ||||||||
Sbjct: 205 gaatcttgatgatgctgcatcggacatcagtgacta 240
