miRNEST 2.0, an integrative microRNA resource :: BLAST
>42309_osa-MIR1882g:mirbase
Length = 158
Score = 266 bits (134), Expect = 5e-72
Identities = 153/158 (96%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 3 ttatcgttaccaatatcctagattgctttcaaggtcatttctttatggaaccccattccc 62
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2 ttatcgttaccaacatcctagattgctttcaaggtcatttctttatgga-ccccattccc 60
Query: 63 ataaatttattatccaaagatggttgctgtatctatgggaataagggttccataatgaaa 122
||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 ataaattcagtatccaaagatggttgctgtatctatgggaataagggttccataacgaaa 120
Query: 123 tgatcttggacgcaatctaggagtttgctgatgataac 160
||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatcttggacgcaatctaggagtttgctgatgataac 158
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 18 tcctagattgctttcaaggtcatttctttatggaaccc 55
||||||||||| | |||| ||||||| |||||||||||
Sbjct: 142 tcctagattgcgtccaagatcatttcgttatggaaccc 105
>42306_osa-MIR1882d:mirbase
Length = 160
Score = 254 bits (128), Expect = 2e-68
Identities = 152/160 (95%)
Strand = Plus / Plus
Query: 1 tgttatcgttaccaatatcctagattgctttcaaggtcatttctttatggaaccccattc 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 1 tgttatcgttaccaatatcctagattgctttcaaggtcatttctttaggaaaccccattc 60
Query: 61 ccataaatttattatccaaagatggttgctgtatctatgggaataagggttccataatga 120
||||||||| | |||||||||||||||| |||||||||||||||||||||||| ||| ||
Sbjct: 61 ccataaattcagtatccaaagatggttgttgtatctatgggaataagggttccctaacga 120
Query: 121 aatgatcttggacgcaatctaggagtttgctgatgataac 160
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 aatgatcttggacgcaatctaggagtttgctgataataac 160
>42191_osa-MIR1317:mirbase
Length = 161
Score = 240 bits (121), Expect = 3e-64
Identities = 148/157 (94%)
Strand = Plus / Plus
Query: 3 ttatcgttaccaatatcctagattgctttcaaggtcatttctttatggaaccccattccc 62
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3 ttatcgttaccaatatcctagattgctttcaaggtcatttctttagggaaccccattccc 62
Query: 63 ataaatttattatccaaagatggttgctgtatctatgggaataagggttccataatgaaa 122
||||||| | ||||||||| ||||||||||||||||||||||||||||||| | | ||||
Sbjct: 63 ataaattcagtatccaaagctggttgctgtatctatgggaataagggttcccttacgaaa 122
Query: 123 tgatcttggacgcaatctaggagtttgctgatgataa 159
|||||||||||| |||||||||||||||||| |||||
Sbjct: 123 tgatcttggacgtaatctaggagtttgctgacgataa 159
>42190_osa-MIR1317:mirbase
Length = 161
Score = 240 bits (121), Expect = 3e-64
Identities = 148/157 (94%)
Strand = Plus / Plus
Query: 3 ttatcgttaccaatatcctagattgctttcaaggtcatttctttatggaaccccattccc 62
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3 ttatcgttaccaatatcctagattgctttcaaggtcatttctttagggaaccccattccc 62
Query: 63 ataaatttattatccaaagatggttgctgtatctatgggaataagggttccataatgaaa 122
||||||| | ||||||||| ||||||||||||||||||||||||||||||| | | ||||
Sbjct: 63 ataaattcagtatccaaagctggttgctgtatctatgggaataagggttcccttacgaaa 122
Query: 123 tgatcttggacgcaatctaggagtttgctgatgataa 159
|||||||||||| |||||||||||||||||| |||||
Sbjct: 123 tgatcttggacgtaatctaggagtttgctgacgataa 159
>42189_osa-MIR1317:mirbase
Length = 161
Score = 240 bits (121), Expect = 3e-64
Identities = 148/157 (94%)
Strand = Plus / Plus
Query: 3 ttatcgttaccaatatcctagattgctttcaaggtcatttctttatggaaccccattccc 62
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3 ttatcgttaccaatatcctagattgctttcaaggtcatttctttagggaaccccattccc 62
Query: 63 ataaatttattatccaaagatggttgctgtatctatgggaataagggttccataatgaaa 122
||||||| | ||||||||| ||||||||||||||||||||||||||||||| | | ||||
Sbjct: 63 ataaattcagtatccaaagctggttgctgtatctatgggaataagggttcccttacgaaa 122
Query: 123 tgatcttggacgcaatctaggagtttgctgatgataa 159
|||||||||||| |||||||||||||||||| |||||
Sbjct: 123 tgatcttggacgtaatctaggagtttgctgacgataa 159
>42310_osa-MIR1882h:mirbase
Length = 193
Score = 222 bits (112), Expect = 6e-59
Identities = 148/160 (92%)
Strand = Plus / Plus
Query: 1 tgttatcgttaccaatatcctagattgctttcaaggtcatttctttatggaaccccattc 60
|||||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||
Sbjct: 15 tgttatcgttaccaatttcctagattgctttcaaggtcatttctttctgaaaccccgttc 74
Query: 61 ccataaatttattatccaaagatggttgctgtatctatgggaataagggttccataatga 120
||||||||| | ||||||||| |||||| ||||||||||| |||||||||| || |||||
Sbjct: 75 ccataaattcagtatccaaagctggttgttgtatctatggaaataagggtttcagaatga 134
Query: 121 aatgatcttggacgcaatctaggagtttgctgatgataac 160
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 135 aatgatcttggacgcaatctaggagtttgctgacgataac 174
>42308_osa-MIR1882f:mirbase
Length = 160
Score = 222 bits (112), Expect = 6e-59
Identities = 149/160 (93%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 1 tgttatcgttaccaatatcctagattgctttcaaggtcatttctttatggaaccccattc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 tgttatcgttaccaatatcctagattgctttcaaggtcatttctttagggaaccccattc 60
Query: 61 ccataaatttattatccaaagatggttgctgtatctatgggaataagggttccataatga 120
||||||||| | ||||||||| ||||||||||||||||||||||||||||||| ||| ||
Sbjct: 61 ccataaattcagtatccaaagctggttgctgtatctatgggaataagggttcc-taacga 119
Query: 121 aatgatcttggacgcaatctaggagtttgctgatgataac 160
|||||||||||| ||||||| ||| ||||| || ||||||
Sbjct: 120 aatgatcttggatgcaatcttggattttgcggacgataac 159
>42303_osa-MIR1882a:mirbase
Length = 159
Score = 220 bits (111), Expect = 2e-58
Identities = 148/160 (92%), Gaps = 4/160 (2%)
Strand = Plus / Plus
Query: 1 tgttatcgttaccaatatcctagattgctttcaaggtcatttctttatggaaccccattc 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3 tgttatcggtaccaatatcctagattgctttcaaggtcatttctttatggaagcccattc 62
Query: 61 ccataaatttattatccaaagatggttgctgtatctatgggaataagggttccataatga 120
||||||||| | |||||||||||||||| |||||||| |||| ||||||||||| ||
Sbjct: 63 ccataaattcagtatccaaagatggttgttgtatcta----aataggggttccataacga 118
Query: 121 aatgatcttggacgcaatctaggagtttgctgatgataac 160
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 119 aatgatcttggatgcaatctaggagtttgctgatgataac 158
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 18 tcctagattgctttcaaggtcatttctttatggaacccc 56
||||||||||| | |||| ||||||| ||||||||||||
Sbjct: 142 tcctagattgcatccaagatcatttcgttatggaacccc 104
>42307_osa-MIR1882e:mirbase
Length = 141
Score = 216 bits (109), Expect = 4e-57
Identities = 133/141 (94%)
Strand = Plus / Plus
Query: 12 ccaatatcctagattgctttcaaggtcatttctttatggaaccccattcccataaattta 71
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 1 ccaatatcctagattgctttcaaggtcatttctttagggaaccccattcccataaattca 60
Query: 72 ttatccaaagatggttgctgtatctatgggaataagggttccataatgaaatgatcttgg 131
||||||||| ||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct: 61 gtatccaaagctggttgctgtatctatgggaataagggttcccttacgaaatgatcttgg 120
Query: 132 acgcaatctaggagtttgctg 152
||| |||||||||||||||||
Sbjct: 121 acgtaatctaggagtttgctg 141
>42305_osa-MIR1882c:mirbase
Length = 130
Score = 184 bits (93), Expect = 1e-47
Identities = 123/132 (93%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 16 tatcctagattgctttcaaggtcatttctttatggaaccccattcccataaatttattat 75
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||
Sbjct: 1 tatcctagattgctttcaaggtcatttctttagggaaccccattcccataaattcagtat 60
Query: 76 ccaaagatggttgctgtatctatgggaataagggttccataatgaaatgatcttggacgc 135
|||||| |||||| ||||||||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 61 ccaaagctggttgttgtatctatggga--aagggttccctaacgaaatgatcttggacgc 118
Query: 136 aatctaggagtt 147
||||||||||||
Sbjct: 119 aatctaggagtt 130
