miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42358_osa-MIR2118n:mirbase
Length = 179
Score = 89.7 bits (45), Expect = 7e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 117 tttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 176
|||||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct: 117 tttttcccgatgcctcccattcctatcgttcttaagcacttcttcctcttcctttcagct 176
Query: 177 c 177
|
Sbjct: 177 c 177
Score = 83.8 bits (42), Expect = 4e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 tgagcgaggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagagga 61
||||| |||||||||||||||||| || ||||||||||||||||||||||||| |||||
Sbjct: 2 tgagccaggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggagga 61
Query: 62 aa 63
||
Sbjct: 62 aa 63
>42354_osa-MIR2118j:mirbase
Length = 171
Score = 85.7 bits (43), Expect = 1e-17
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 176
|||||| |||||||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 107 ttttcctgatgcctcccattcctatagttcttaggtgctcgttcctcttactttcagct 165
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 tctaagagcagtgggaatgggaacat 55
|||||||||||| |||||||||||||
Sbjct: 27 tctaagagcagtaggaatgggaacat 52
>42361_osa-MIR2118q:mirbase
Length = 177
Score = 83.8 bits (42), Expect = 4e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagctc 177
|||||||||||||||| ||||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 116 ttttcccgatgcctcctattcctaccgatcttaggtactccttcctcttcctttaagctc 175
Query: 178 at 179
||
Sbjct: 176 at 177
Score = 46.1 bits (23), Expect = 9e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
||||||||||||||||| ||||||||| ||||||| ||||||| |||||||
Sbjct: 9 ggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaa 63
>42355_osa-MIR2118k:mirbase
Length = 177
Score = 83.8 bits (42), Expect = 4e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||| |||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 116 ttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttt 169
>42351_osa-MIR2118g:mirbase
Length = 160
Score = 83.8 bits (42), Expect = 4e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 126 atgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 107 atgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
Score = 56.0 bits (28), Expect = 9e-09
Identities = 49/55 (89%), Gaps = 2/55 (3%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
|||||||||||| ||||| |||||||||| || ||||||||||||| |||||||
Sbjct: 10 ggaagaggaagacagagg--gtctaagagctgtaggaatgggaacatggaggaaa 62
>42360_osa-MIR2118p:mirbase
Length = 174
Score = 77.8 bits (39), Expect = 3e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcc 168
||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 113 ttttcccgatgcctcccatgcctattgtccttaggtgctccttcctcttcc 163
>42841_zma-MIR2118e:mirbase
Length = 143
Score = 75.8 bits (38), Expect = 1e-14
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||| |||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 88 ttttcctgatgtctcccattcctacggttcttaggtgctccttcctcttccttt 141
Score = 56.0 bits (28), Expect = 9e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacat 55
|||||| ||||||||||| ||||||||||||||||||||| |||||
Sbjct: 4 aggaagtggaagaaagagaatgtctaagagcagtgggaatggaaacat 51
>42839_zma-MIR2118c:mirbase
Length = 133
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 126 atgcctcccattcctatcgttcttaggtgctccttcctctt 166
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 91 atgcctcccattcctatcgttcttaggtgatccttcctctt 131
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 30 tctaagagcagtgggaatgggaacatagaggaa 62
||||||||||||||| |||||||||| ||||||
Sbjct: 21 tctaagagcagtgggcatgggaacatggaggaa 53
>42350_osa-MIR2118f:mirbase
Length = 169
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctt 170
|||||| |||||||||||||||||| |||||| |||||||||||| |||||||
Sbjct: 107 ttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcctt 159
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 36 agcagtgggaatgggaacatagaggaaa 63
|||||||||||||||||||| |||||||
Sbjct: 37 agcagtgggaatgggaacatggaggaaa 64
>42840_zma-MIR2118d:mirbase
Length = 148
Score = 71.9 bits (36), Expect = 2e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 120 ttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||| |||||||||||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 89 ttcctgatgcctcccatgcctatcgttgttaggtgctccttcctcttgcttt 140
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 29 gtctaagagcagtgggaatgggaaca 54
|||||||||||||||| |||||||||
Sbjct: 25 gtctaagagcagtgggcatgggaaca 50
>42353_osa-MIR2118i:mirbase
Length = 181
Score = 67.9 bits (34), Expect = 2e-12
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 127 tgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 176
|||||||||||||||| || ||||| | ||||||||||||||||||||||
Sbjct: 129 tgcctcccattcctattgtccttagatactccttcctcttcctttcagct 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
||||||||||||||| | ||||||| ||| | ||||||||||||| |||||||
Sbjct: 8 aggaagaggaagaaattgagtgtctaagggcaatcggaatgggaacattgaggaaa 63
>42348_osa-MIR2118d:mirbase
Length = 176
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||| |||||||||||| ||||| ||||| || |||||||||||||||||||
Sbjct: 115 ttttcctgatgcctcccatgcctattgttctcagatgctccttcctcttccttt 168
Score = 44.1 bits (22), Expect = 4e-05
Identities = 50/57 (87%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 8 aggaagaggaag-aaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
|||||||||||| ||||||| |||| ||||| ||||| |||||||||| |||||||
Sbjct: 8 aggaagaggaagaaaagagg--gtctgagagcggtgggcatgggaacatggaggaaa 62
>42352_osa-MIR2118h:mirbase
Length = 157
Score = 61.9 bits (31), Expect = 2e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcc 168
|||||| |||||||| ||||||||| ||||| ||||||||||||||||||
Sbjct: 107 ttttcctgatgcctctcattcctatggttctagggtgctccttcctcttcc 157
>42362_osa-MIR2118r:mirbase
Length = 175
Score = 60.0 bits (30), Expect = 6e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 116 atttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcct 169
||||||||| ||||||||||| |||| |||||||||| |||||||| ||||||
Sbjct: 112 atttttcccaatgcctcccatgcctacagttcttaggtactccttccccttcct 165
Score = 56.0 bits (28), Expect = 9e-09
Identities = 50/55 (90%), Gaps = 3/55 (5%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaa-gaggtagtctaagagcagtgggaatgggaacatagaggaa 62
|||||||||||||| |||| |||||||||||||||| |||||||||| ||||||
Sbjct: 9 ggaagaggaagaaaagagg--gtctaagagcagtgggcatgggaacatggaggaa 61
>42838_zma-MIR2118b:mirbase
Length = 118
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 32 taagagcagtgggaatgggaacatagaggaaa 63
|||||||||||||||||||||||| |||||||
Sbjct: 1 taagagcagtgggaatgggaacatggaggaaa 32
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 119 tttcccgatgcctcccattcctatcgttctta 150
|||||||||||||||||||||||| |||||||
Sbjct: 87 tttcccgatgcctcccattcctattgttctta 118
>42345_osa-MIR2118a:mirbase
Length = 179
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttctt 149
||||| ||||||||||||||||||||||||||
Sbjct: 129 ttttctcgatgcctcccattcctatcgttctt 160
>42357_osa-MIR2118m:mirbase
Length = 170
Score = 54.0 bits (27), Expect = 4e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttc 172
|||||| ||||||||||||||||| |||||||||| || |||||||| |||||
Sbjct: 106 ttttcctgatgcctcccattcctacagttcttaggtccttgttcctcttactttc 160
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 tctaagagcagtgggaatgggaacat 55
|||||||||||| |||||||||||||
Sbjct: 26 tctaagagcagtaggaatgggaacat 51
>42356_osa-MIR2118l:mirbase
Length = 177
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 126 atgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||| |||||||||||| ||| |||| | |||||||||||||||||
Sbjct: 127 atgcttcccattcctattgttgttagatactccttcctcttccttt 172
Score = 40.1 bits (20), Expect = 6e-04
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacat 55
||||||||||||||| | |||||||| |||||||||||| |||||
Sbjct: 9 aggaagaggaagaaattgagtgtctaagaacagtgggaatggaaacat 56
>42349_osa-MIR2118e:mirbase
Length = 177
Score = 52.0 bits (26), Expect = 1e-07
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaaaa 65
||||||||||||||| || ||||||||||||| || |||||||||| |||||||||
Sbjct: 9 aggaagaggaagaaa-agagagtctaagagcagcaggcatgggaacatggaggaaaaa 65
Score = 50.1 bits (25), Expect = 6e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 117 tttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcct 169
|||||||| ||||||||||| |||| ||||||||| |||||||| ||||||
Sbjct: 118 tttttcccaatgcctcccatgcctacagttcttaggcactccttccacttcct 170
>42842_zma-MIR2118f:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 32 taagagcagtgggaatgggaacatagaggaaa 63
||||||||||||| |||||||||||| |||||
Sbjct: 1 taagagcagtgggcatgggaacataggggaaa 32
>42359_osa-MIR2118o:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 125 gatgcctcccattcctatcgttcttaggtgctccttcctcttcc 168
||||||||||| ||||| |||| | ||||||||||||||||||
Sbjct: 112 gatgcctcccaagcctattgttccttggtgctccttcctcttcc 155
>42347_osa-MIR2118c:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattccta 141
|||||||||||||||| |||||||
Sbjct: 74 ttttcccgatgcctcctattccta 97
