miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42361_osa-MIR2118q:mirbase
Length = 177
Score = 127 bits (64), Expect = 2e-30
Identities = 91/99 (91%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 1 tgggaataggaacatggaggaaagcctaaagctaaattttctgctccagtattggagcta 60
||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||
Sbjct: 41 tgggaataggaacatggaggaaagcctgaagctaaattttctactccagtatcggagtta 100
Query: 61 gagatttgctc--agttttcccgatgcctcctattccta 97
|| |||||||| |||||||||||||||||||||||||
Sbjct: 101 gaaatttgctctgcgttttcccgatgcctcctattccta 139
>42358_osa-MIR2118n:mirbase
Length = 179
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tgggaataggaacatggaggaaagcctaaa 30
||||||| ||||||||||||||||||||||
Sbjct: 41 tgggaatgggaacatggaggaaagcctaaa 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 ttttcccgatgcctcctattccta 97
|||||||||||||||| |||||||
Sbjct: 118 ttttcccgatgcctcccattccta 141
>42838_zma-MIR2118b:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgggaataggaacatggaggaaagcc 26
||||||| ||||||||||||||||||
Sbjct: 10 tgggaatgggaacatggaggaaagcc 35
>42843_zma-MIR2118g:mirbase
Length = 145
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 73 gttttcccgatgcctcctattccta 97
||||||| |||||||||||||||||
Sbjct: 87 gttttcctgatgcctcctattccta 111
>42350_osa-MIR2118f:mirbase
Length = 169
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgggaataggaacatggaggaaagc 25
||||||| |||||||||||||||||
Sbjct: 42 tgggaatgggaacatggaggaaagc 66
>42346_osa-MIR2118b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 ttttcccgatgcctcctattccta 97
|||||||||||||||| |||||||
Sbjct: 118 ttttcccgatgcctcccattccta 141
