miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42355_osa-MIR2118k:mirbase
Length = 177
Score = 89.7 bits (45), Expect = 6e-19
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 105 tgttttcctgatgcctcccattcctattgttcttgggtgctccttccccttccttcttgg 164
||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| ||||
Sbjct: 114 tgttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttcctt-ttgg 172
Query: 165 cttgc 169
|||||
Sbjct: 173 cttgc 177
>42351_osa-MIR2118g:mirbase
Length = 160
Score = 79.8 bits (40), Expect = 6e-16
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 108 tttcctgatgcctcccattcctattgttcttgggtgctccttccccttcctt 159
|||||| |||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttcctt 151
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 ggaatgggaacatggaggaaag 65
||||||||||||||||||||||
Sbjct: 42 ggaatgggaacatggaggaaag 63
>42352_osa-MIR2118h:mirbase
Length = 157
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 105 tgttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcc 157
||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||
Sbjct: 105 tgttttcctgatgcctctcattcctatggttctagggtgctccttcctcttcc 157
>42346_osa-MIR2118b:mirbase
Length = 179
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 107 ttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcctt 159
|||||| |||||||||||||||||| |||||| |||||||||||| |||||||
Sbjct: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctt 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 37 agcagtgggaatgggaacatggaggaaa 64
|||||||||||||||||||| |||||||
Sbjct: 36 agcagtgggaatgggaacatagaggaaa 63
>42841_zma-MIR2118e:mirbase
Length = 143
Score = 69.9 bits (35), Expect = 6e-13
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 105 tgttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcctt 159
||||||||||||| |||||||||||| |||||| |||||||||||| |||||||
Sbjct: 86 tgttttcctgatgtctcccattcctacggttcttaggtgctccttcctcttcctt 140
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 37 agcagtgggaatgggaacatggaggaaagcatga 70
|||||||||||||| |||||| ||||||||||||
Sbjct: 32 agcagtgggaatggaaacatgaaggaaagcatga 65
>42348_osa-MIR2118d:mirbase
Length = 176
Score = 69.9 bits (35), Expect = 6e-13
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 105 tgttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcctt 159
||||||||||||||||||||| ||||||||||| | |||||||||| |||||||
Sbjct: 113 tgttttcctgatgcctcccatgcctattgttctcagatgctccttcctcttcctt 167
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 gtgggaatgggaacatggaggaaagc 66
||||| ||||||||||||||||||||
Sbjct: 39 gtgggcatgggaacatggaggaaagc 64
>42358_osa-MIR2118n:mirbase
Length = 179
Score = 67.9 bits (34), Expect = 2e-12
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 gtgagccagggaagaggaagaacgagagggttcaatagcagtgggaatgggaacatggag 60
|||||||||| ||||||||||| ||||| | || ||||||||||||||||||||||||
Sbjct: 1 gtgagccagg-aagaggaagaaagagagagcctaagagcagtgggaatgggaacatggag 59
Query: 61 gaaagc 66
||||||
Sbjct: 60 gaaagc 65
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 107 ttttcctgatgcctcccattcctattgttctt 138
|||||| |||||||||||||||||| ||||||
Sbjct: 118 ttttcccgatgcctcccattcctatcgttctt 149
>42360_osa-MIR2118p:mirbase
Length = 174
Score = 65.9 bits (33), Expect = 9e-12
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 105 tgttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcc 157
|||||||| |||||||||||| |||||||| ||| |||||||||||| |||||
Sbjct: 111 tgttttcccgatgcctcccatgcctattgtccttaggtgctccttcctcttcc 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 40 agtgggaatgggaacatggaggaaag 65
|||||| |||||||||||||||||||
Sbjct: 38 agtgggcatgggaacatggaggaaag 63
>42354_osa-MIR2118j:mirbase
Length = 171
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 107 ttttcctgatgcctcccattcctattgttcttgggtgctccttcc 151
||||||||||||||||||||||||| |||||| ||||||| ||||
Sbjct: 107 ttttcctgatgcctcccattcctatagttcttaggtgctcgttcc 151
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 37 agcagtgggaatgggaacatggaggaaagc 66
|||||| |||||||||||||| ||||||||
Sbjct: 33 agcagtaggaatgggaacatgaaggaaagc 62
>42839_zma-MIR2118c:mirbase
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 101 tttgtgttttcctgatgcctcccattcctattgttcttgggtgctccttcc 151
||||||| ||||| ||||||||||||||||| |||||| |||| |||||||
Sbjct: 77 tttgtgtcttcctaatgcctcccattcctatcgttcttaggtgatccttcc 127
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 37 agcagtgggaatgggaacatggaggaa 63
||||||||| |||||||||||||||||
Sbjct: 27 agcagtgggcatgggaacatggaggaa 53
>42356_osa-MIR2118l:mirbase
Length = 177
Score = 61.9 bits (31), Expect = 1e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 101 tttgtgttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcctt 159
||||||||||||| |||| |||||||||||||||| || | | |||||||| |||||||
Sbjct: 113 tttgtgttttcctaatgcttcccattcctattgttgttagatactccttcctcttcctt 171
>42353_osa-MIR2118i:mirbase
Length = 181
Score = 61.9 bits (31), Expect = 1e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 101 tttgtgttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcctt 159
||||||||||||| ||||||||||||||||||| ||| | | |||||||| |||||||
Sbjct: 114 tttgtgttttcctagtgcctcccattcctattgtccttagatactccttcctcttcctt 172
>42838_zma-MIR2118b:mirbase
Length = 118
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 37 agcagtgggaatgggaacatggaggaaagc 66
||||||||||||||||||||||||||||||
Sbjct: 5 agcagtgggaatgggaacatggaggaaagc 34
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 108 tttcctgatgcctcccattcctattgttctt 138
||||| |||||||||||||||||||||||||
Sbjct: 87 tttcccgatgcctcccattcctattgttctt 117
>42359_osa-MIR2118o:mirbase
Length = 155
Score = 56.0 bits (28), Expect = 9e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 110 tcctgatgcctcccattcctattgttcttgggtgctccttccccttcc 157
||||||||||||||| |||||||||| | |||||||||||| |||||
Sbjct: 108 tcctgatgcctcccaagcctattgttccttggtgctccttcctcttcc 155
>42843_zma-MIR2118g:mirbase
Length = 145
Score = 54.0 bits (27), Expect = 3e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 105 tgttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcctt 159
|||||||||||||||||| ||||||| | |||| ||| ||||||||| ||||||
Sbjct: 86 tgttttcctgatgcctcctattcctaaggctcttaggttctccttccctttcctt 140
>42840_zma-MIR2118d:mirbase
Length = 148
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 109 ttcctgatgcctcccattcctattgttcttgggtgctccttcc 151
||||||||||||||||| ||||| ||| || ||||||||||||
Sbjct: 89 ttcctgatgcctcccatgcctatcgttgttaggtgctccttcc 131
>42362_osa-MIR2118r:mirbase
Length = 175
Score = 54.0 bits (27), Expect = 3e-08
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 9 gggaagaggaagaacgagagggttcaatagcagtgggaatgggaacatggaggaa 63
|||||||||||||| ||||||| || ||||||||| |||||||||||||||||
Sbjct: 8 gggaagaggaagaaa-agagggtctaagagcagtgggcatgggaacatggaggaa 61
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 115 atgcctcccattcctattgttcttgggtgctccttccccttcct 158
||||||||||| |||| |||||| ||| |||||||||||||||
Sbjct: 122 atgcctcccatgcctacagttcttaggtactccttccccttcct 165
>42361_osa-MIR2118q:mirbase
Length = 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 7 cagggaagaggaagaacgagagggttcaatagcagtgggaatgggaacatggaggaaagc 66
|||||||||||||||| ||||| | || ||| ||||||| |||||||||||||||||
Sbjct: 6 cagggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaagc 65
>42357_osa-MIR2118m:mirbase
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 ttttcctgatgcctcccattccta 130
||||||||||||||||||||||||
Sbjct: 106 ttttcctgatgcctcccattccta 129
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 37 agcagtgggaatgggaacatggaggaaagc 66
|||||| |||||||||||||| ||||||||
Sbjct: 32 agcagtaggaatgggaacatgaaggaaagc 61
>42345_osa-MIR2118a:mirbase
Length = 179
Score = 48.1 bits (24), Expect = 2e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 9 gggaagaggaagaacgagagggttcaatagcagtgggaatgggaacatggaggaaagcat 68
|||||||||||||| |||||| | ||| || ||| ||| ||||||||| ||||||||
Sbjct: 1 gggaagaggaagaaagagaggctccaagagtagtaggactgggaacatatgagaaagcat 60
Query: 69 gagctcta 76
||||||||
Sbjct: 61 gagctcta 68
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 105 tgttttcctgatgcctcccattcctattgttcttgg 140
||||||| |||||||||||||||||| ||||||||
Sbjct: 127 tgttttctcgatgcctcccattcctatcgttcttgg 162
>42837_zma-MIR2118a:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 109 ttcctgatgcctcccattcctattgttctt 138
||||||||||||| ||||||||| ||||||
Sbjct: 86 ttcctgatgcctctcattcctatggttctt 115
>42347_osa-MIR2118c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 42 tgggaatgggaacatggaggaaagc 66
||||||| |||||||||||||||||
Sbjct: 1 tgggaataggaacatggaggaaagc 25
>42288_osa-MIR1869:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 47 atgggaacatggaggaaagc 66
||||||||||||||||||||
Sbjct: 112 atgggaacatggaggaaagc 93
