miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42355_osa-MIR2118k:mirbase
Length = 177
Score = 89.7 bits (45), Expect = 6e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttt 169
>42346_osa-MIR2118b:mirbase
Length = 179
Score = 83.8 bits (42), Expect = 4e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 107 atgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 126 atgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
Score = 56.0 bits (28), Expect = 8e-09
Identities = 49/55 (89%), Gaps = 2/55 (3%)
Strand = Plus / Plus
Query: 10 ggaagaggaagacagagg--gtctaagagctgtaggaatgggaacatggaggaaa 62
|||||||||||| ||||| |||||||||| || ||||||||||||| |||||||
Sbjct: 9 ggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
>42350_osa-MIR2118f:mirbase
Length = 169
Score = 79.8 bits (40), Expect = 6e-16
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttcctt 151
|||||| |||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 108 tttcctgatgcctcccattcctattgttcttgggtgctccttccccttcctt 159
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 ggaatgggaacatggaggaaag 63
||||||||||||||||||||||
Sbjct: 44 ggaatgggaacatggaggaaag 65
>42841_zma-MIR2118e:mirbase
Length = 143
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttcctttgg 154
|||||| ||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 89 tttcctgatgtctcccattcctacggttcttaggtgctccttcctcttcctttgg 143
>42839_zma-MIR2118c:mirbase
Length = 133
Score = 77.8 bits (39), Expect = 2e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 101 ttcctaatgcctcccattcctattgttcttaggtgctccttcctctt 147
||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 85 ttcctaatgcctcccattcctatcgttcttaggtgatccttcctctt 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 29 tctaagagctgtaggaatgggaacatggaggaa 61
||||||||| || || |||||||||||||||||
Sbjct: 21 tctaagagcagtgggcatgggaacatggaggaa 53
>42356_osa-MIR2118l:mirbase
Length = 177
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
||||||||||| |||||||||||||||| |||| | |||||||||||||||||
Sbjct: 120 tttcctaatgcttcccattcctattgttgttagatactccttcctcttccttt 172
>42354_osa-MIR2118j:mirbase
Length = 171
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
|||||| ||||||||||||||||| |||||||||||||| |||||||| ||||
Sbjct: 108 tttcctgatgcctcccattcctatagttcttaggtgctcgttcctcttacttt 160
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 29 tctaagagctgtaggaatgggaacatggaggaaag 63
||||||||| ||||||||||||||||| |||||||
Sbjct: 27 tctaagagcagtaggaatgggaacatgaaggaaag 61
>42353_osa-MIR2118i:mirbase
Length = 181
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
||||||| ||||||||||||||||||| ||||| | |||||||||||||||||
Sbjct: 121 tttcctagtgcctcccattcctattgtccttagatactccttcctcttccttt 173
>42348_osa-MIR2118d:mirbase
Length = 176
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
|||||| ||||||||||| ||||||||||| || |||||||||||||||||||
Sbjct: 116 tttcctgatgcctcccatgcctattgttctcagatgctccttcctcttccttt 168
Score = 54.0 bits (27), Expect = 3e-08
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 10 ggaagaggaagaca-gagggtctaagagctgtaggaatgggaacatggaggaaag 63
|||||||||||| | |||||||| ||||| || || |||||||||||||||||||
Sbjct: 9 ggaagaggaagaaaagagggtctgagagcggtgggcatgggaacatggaggaaag 63
>42360_osa-MIR2118p:mirbase
Length = 174
Score = 69.9 bits (35), Expect = 6e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 107 atgcctcccattcctattgttcttaggtgctccttcctcttcc 149
||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 121 atgcctcccatgcctattgtccttaggtgctccttcctcttcc 163
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 45 atgggaacatggaggaaagt 64
||||||||||||||||||||
Sbjct: 45 atgggaacatggaggaaagt 64
>42840_zma-MIR2118d:mirbase
Length = 148
Score = 63.9 bits (32), Expect = 3e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 101 ttcctaatgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
||||| ||||||||||| ||||| ||| ||||||||||||||||||| ||||
Sbjct: 89 ttcctgatgcctcccatgcctatcgttgttaggtgctccttcctcttgcttt 140
Score = 50.1 bits (25), Expect = 5e-07
Identities = 46/52 (88%), Gaps = 2/52 (3%)
Strand = Plus / Plus
Query: 10 ggaagaggaagacagagggtctaagagctgtaggaatgggaacatggaggaa 61
|||||||||||| |||||||||||||| || || ||||||||| |||||||
Sbjct: 9 ggaagaggaaga--gagggtctaagagcagtgggcatgggaacacggaggaa 58
>42362_osa-MIR2118r:mirbase
Length = 175
Score = 60.0 bits (30), Expect = 5e-10
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 9 gggaagaggaagaca-gagggtctaagagctgtaggaatgggaacatggaggaa 61
||||||||||||| | |||||||||||||| || || |||||||||||||||||
Sbjct: 8 gggaagaggaagaaaagagggtctaagagcagtgggcatgggaacatggaggaa 61
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttcct 150
||||| |||||||||||| |||| |||||||||| |||||||| ||||||
Sbjct: 115 tttcccaatgcctcccatgcctacagttcttaggtactccttccccttcct 165
>42352_osa-MIR2118h:mirbase
Length = 157
Score = 60.0 bits (30), Expect = 5e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttcc 149
|||||| ||||||| ||||||||| ||||| ||||||||||||||||||
Sbjct: 108 tttcctgatgcctctcattcctatggttctagggtgctccttcctcttcc 157
>42359_osa-MIR2118o:mirbase
Length = 155
Score = 56.0 bits (28), Expect = 8e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 102 tcctaatgcctcccattcctattgttcttaggtgctccttcctcttcc 149
|||| |||||||||| |||||||||| | ||||||||||||||||||
Sbjct: 108 tcctgatgcctcccaagcctattgttccttggtgctccttcctcttcc 155
>42357_osa-MIR2118m:mirbase
Length = 170
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 29 tctaagagctgtaggaatgggaacatggaggaaag 63
||||||||| ||||||||||||||||| |||||||
Sbjct: 26 tctaagagcagtaggaatgggaacatgaaggaaag 60
Score = 50.1 bits (25), Expect = 5e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
|||||| |||||||||||||||| |||||||||| || |||||||| ||||
Sbjct: 107 tttcctgatgcctcccattcctacagttcttaggtccttgttcctcttacttt 159
>42361_osa-MIR2118q:mirbase
Length = 177
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 107 atgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
|||||||| ||||||| | |||||||| |||||||||||||||||
Sbjct: 124 atgcctcctattcctaccgatcttaggtactccttcctcttccttt 169
Score = 44.1 bits (22), Expect = 3e-05
Identities = 49/57 (85%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 9 gggaagaggaagacagaggg--tctaagagctgtaggaatgggaacatggaggaaag 63
||||||||||||| |||| | ||||||||| | ||||| ||||||||||||||||
Sbjct: 8 gggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaag 64
>42358_osa-MIR2118n:mirbase
Length = 179
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 30 ctaagagctgtaggaatgggaacatggaggaaag 63
|||||||| || ||||||||||||||||||||||
Sbjct: 31 ctaagagcagtgggaatgggaacatggaggaaag 64
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 107 atgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
||||||||||||||||| ||||||| | || ||||||||||||||
Sbjct: 126 atgcctcccattcctatcgttcttaagcacttcttcctcttccttt 171
>42349_osa-MIR2118e:mirbase
Length = 177
Score = 52.0 bits (26), Expect = 1e-07
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 10 ggaagaggaagaca-gagggtctaagagctgtaggaatgggaacatggaggaaa 62
|||||||||||| | ||| |||||||||| | ||| ||||||||||||||||||
Sbjct: 10 ggaagaggaagaaaagagagtctaagagcagcaggcatgggaacatggaggaaa 63
Score = 46.1 bits (23), Expect = 8e-06
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttcct 150
||||| |||||||||||| |||| ||||||||| |||||||| ||||||
Sbjct: 120 tttcccaatgcctcccatgcctacagttcttaggcactccttccacttcct 170
>42838_zma-MIR2118b:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 31 taagagctgtaggaatgggaacatggaggaaag 63
||||||| || ||||||||||||||||||||||
Sbjct: 1 taagagcagtgggaatgggaacatggaggaaag 33
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 107 atgcctcccattcctattgttctta 131
|||||||||||||||||||||||||
Sbjct: 94 atgcctcccattcctattgttctta 118
>42288_osa-MIR1869:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 100 tttcctaatgcctcccattcctattgttcttaggtgctcctt 141
||||| ||| |||||||| ||||||||||| ||||| |||||
Sbjct: 42 tttcccaatacctcccatgcctattgttctcaggtgttcctt 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 30 ctaagagctgtaggaatgggaacatggaggaaag 63
|||||||| |||| |||||||||||||||||||
Sbjct: 127 ctaagagcattaggcatgggaacatggaggaaag 94
>42842_zma-MIR2118f:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 100 tttcctaatgcctcccattcctattgttctta 131
||||| ||||||| |||| |||||||||||||
Sbjct: 89 tttcccaatgccttccatgcctattgttctta 120
>42345_osa-MIR2118a:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 atgcctcccattcctattgttctt 130
||||||||||||||||| ||||||
Sbjct: 137 atgcctcccattcctatcgttctt 160
