miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42355_osa-MIR2118k:mirbase
Length = 177
Score = 178 bits (90), Expect = 8e-46
Identities = 142/158 (89%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 1 ggaagaggaagaaagagaggatctcagaaatgtaggaatgagaacatgaaggaaagtcta 60
||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||| |||
Sbjct: 9 ggaagaggaagaaagagagtatctcagaattgtgggaatgagaccatgaaggaaagccta 68
Query: 61 agagctaatgtctcctctac-attggaggtcgagacttagtttcatgttttcctgatgcc 119
|| ||| |||| |||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 69 agctctattgtcccctctagtattggaggtggaaacttagtttcatgttttcctgatgcc 128
Query: 120 tctcattcctatggttctagggtgctccttcctcttcc 157
|||||||||||| ||||| ||||||||||||||||||
Sbjct: 129 tctcattcctattgttcttaggtgctccttcctcttcc 166
>42350_osa-MIR2118f:mirbase
Length = 169
Score = 73.8 bits (37), Expect = 3e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 105 tgttttcctgatgcctctcattcctatggttctagggtgctccttcctcttcc 157
||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||
Sbjct: 105 tgttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcc 157
>42841_zma-MIR2118e:mirbase
Length = 143
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 104 atgttttcctgatgcctctcattcctatggttctagggtgctccttcctcttcc 157
|||||||||||||| ||| |||||||| |||||| ||||||||||||||||||
Sbjct: 85 atgttttcctgatgtctcccattcctacggttcttaggtgctccttcctcttcc 138
>42346_osa-MIR2118b:mirbase
Length = 179
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 107 ttttcctgatgcctctcattcctatggttctagggtgctccttcctcttcc 157
|||||| |||||||| ||||||||| ||||| ||||||||||||||||||
Sbjct: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcc 168
>42351_osa-MIR2118g:mirbase
Length = 160
Score = 60.0 bits (30), Expect = 5e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 108 tttcctgatgcctctcattcctatggttctagggtgctccttcctcttcc 157
|||||| ||||||| ||||||||| ||||| ||||||||||||||||||
Sbjct: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttcc 149
>42837_zma-MIR2118a:mirbase
Length = 118
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 109 ttcctgatgcctctcattcctatggttct 137
|||||||||||||||||||||||||||||
Sbjct: 86 ttcctgatgcctctcattcctatggttct 114
>42354_osa-MIR2118j:mirbase
Length = 171
Score = 58.0 bits (29), Expect = 2e-09
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 107 ttttcctgatgcctctcattcctatggttctagggtgctccttcctctt 155
||||||||||||||| ||||||||| ||||| ||||||| ||||||||
Sbjct: 107 ttttcctgatgcctcccattcctatagttcttaggtgctcgttcctctt 155
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 32 gtaggaatgagaacatgaaggaaag 56
||||||||| |||||||||||||||
Sbjct: 37 gtaggaatgggaacatgaaggaaag 61
>42348_osa-MIR2118d:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 105 tgttttcctgatgcctctcattcctatggttctagggtgctccttcctcttcc 157
||||||||||||||||| ||| ||||| ||||| | ||||||||||||||||
Sbjct: 113 tgttttcctgatgcctcccatgcctattgttctcagatgctccttcctcttcc 165
>42360_osa-MIR2118p:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 1e-07
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 104 atgttttcctgatgcctctcattcctatggttctagggtgctccttcctcttcc 157
||||||||| |||||||| ||| ||||| || || ||||||||||||||||||
Sbjct: 110 atgttttcccgatgcctcccatgcctattgtccttaggtgctccttcctcttcc 163
>42840_zma-MIR2118d:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 109 ttcctgatgcctctcattcctatggttctagggtgctccttcctctt 155
||||||||||||| ||| ||||| ||| | ||||||||||||||||
Sbjct: 89 ttcctgatgcctcccatgcctatcgttgttaggtgctccttcctctt 135
>42839_zma-MIR2118c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 109 ttcctgatgcctctcattcctatggttctagggtgctccttcctctt 155
||||| ||||||| ||||||||| ||||| |||| |||||||||||
Sbjct: 85 ttcctaatgcctcccattcctatcgttcttaggtgatccttcctctt 131
>42357_osa-MIR2118m:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 32 gtaggaatgagaacatgaaggaaag 56
||||||||| |||||||||||||||
Sbjct: 36 gtaggaatgggaacatgaaggaaag 60
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 ttttcctgatgcctctcattccta 130
||||||||||||||| ||||||||
Sbjct: 106 ttttcctgatgcctcccattccta 129
>42843_zma-MIR2118g:mirbase
Length = 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 104 atgttttcctgatgcctctcattcctatggttctagggtgctccttcc 151
|||||||||||||||||| ||||||| || ||| ||| ||||||||
Sbjct: 85 atgttttcctgatgcctcctattcctaaggctcttaggttctccttcc 132
>42359_osa-MIR2118o:mirbase
Length = 155
Score = 40.1 bits (20), Expect = 5e-04
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 110 tcctgatgcctctcattcctatggttctagggtgctccttcctcttcc 157
|||||||||||| || ||||| |||| ||||||||||||||||||
Sbjct: 108 tcctgatgcctcccaagcctattgttccttggtgctccttcctcttcc 155
>42345_osa-MIR2118a:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaagaggaagaaagagagg 20
||||||||||||||||||||
Sbjct: 2 ggaagaggaagaaagagagg 21
