miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42352_osa-MIR2118h:mirbase
Length = 157
Score = 178 bits (90), Expect = 9e-46
Identities = 142/158 (89%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagagagtatctcagaattgtgggaatgagaccatgaaggaaagccta 68
||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||| |||
Sbjct: 1 ggaagaggaagaaagagaggatctcagaaatgtaggaatgagaacatgaaggaaagtcta 60
Query: 69 agctctattgtcccctctagtattggaggtggaaacttagtttcatgttttcctgatgcc 128
|| ||| |||| |||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 61 agagctaatgtctcctctac-attggaggtcgagacttagtttcatgttttcctgatgcc 119
Query: 129 tctcattcctattgttcttaggtgctccttcctcttcc 166
|||||||||||| ||||| ||||||||||||||||||
Sbjct: 120 tctcattcctatggttctagggtgctccttcctcttcc 157
>42351_osa-MIR2118g:mirbase
Length = 160
Score = 89.7 bits (45), Expect = 7e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 117 tttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttt 169
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tttcctaatgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
>42350_osa-MIR2118f:mirbase
Length = 169
Score = 89.7 bits (45), Expect = 7e-19
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 114 tgttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttcctt-ttgg 172
||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| ||||
Sbjct: 105 tgttttcctgatgcctcccattcctattgttcttgggtgctccttccccttccttcttgg 164
Query: 173 cttgc 177
|||||
Sbjct: 165 cttgc 169
>42348_osa-MIR2118d:mirbase
Length = 176
Score = 85.7 bits (43), Expect = 1e-17
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 114 tgttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttttgg 172
||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||
Sbjct: 113 tgttttcctgatgcctcccatgcctattgttctcagatgctccttcctcttccttttgg 171
>42346_osa-MIR2118b:mirbase
Length = 179
Score = 83.8 bits (42), Expect = 4e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 116 ttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttt 169
|||||| |||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
>42841_zma-MIR2118e:mirbase
Length = 143
Score = 81.8 bits (41), Expect = 2e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 113 atgttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttt 169
|||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 85 atgttttcctgatgtctcccattcctacggttcttaggtgctccttcctcttccttt 141
>42360_osa-MIR2118p:mirbase
Length = 174
Score = 81.8 bits (41), Expect = 2e-16
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 113 atgttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttttgg 172
||||||||| |||||||| ||| |||||||| |||||||||||||||||||||| |||||
Sbjct: 110 atgttttcccgatgcctcccatgcctattgtccttaggtgctccttcctcttccctttgg 169
Query: 173 c 173
|
Sbjct: 170 c 170
>42354_osa-MIR2118j:mirbase
Length = 171
Score = 75.8 bits (38), Expect = 1e-14
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 116 ttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttt 169
||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||
Sbjct: 107 ttttcctgatgcctcccattcctatagttcttaggtgctcgttcctcttacttt 160
>42840_zma-MIR2118d:mirbase
Length = 148
Score = 73.8 bits (37), Expect = 4e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 118 ttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttttggct 174
||||||||||||| ||| ||||| ||| ||||||||||||||||||| |||||||||
Sbjct: 89 ttcctgatgcctcccatgcctatcgttgttaggtgctccttcctcttgcttttggct 145
>42356_osa-MIR2118l:mirbase
Length = 177
Score = 73.8 bits (37), Expect = 4e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 114 tgttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttttggc 173
||||||||| |||| || ||||||||||||| |||| | |||||||||||||||||||||
Sbjct: 117 tgttttcctaatgcttcccattcctattgttgttagatactccttcctcttccttttggc 176
Query: 174 t 174
|
Sbjct: 177 t 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagagagtatctcagaattgtgggaatgagaccatgaaggaaagcct 67
||||||||||||||| |||| ||| |||| ||||||||| | ||| |||||||||||
Sbjct: 9 aggaagaggaagaaattgagtgtctaagaacagtgggaatggaaacattaaggaaagcct 68
Query: 68 a 68
|
Sbjct: 69 a 69
>42353_osa-MIR2118i:mirbase
Length = 181
Score = 63.9 bits (32), Expect = 4e-11
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 114 tgttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttt 169
||||||||| |||||| |||||||||||| ||||| | |||||||||||||||||
Sbjct: 118 tgttttcctagtgcctcccattcctattgtccttagatactccttcctcttccttt 173
>42839_zma-MIR2118c:mirbase
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 118 ttcctgatgcctctcattcctattgttcttaggtgctccttcctctt 164
||||| ||||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 85 ttcctaatgcctcccattcctatcgttcttaggtgatccttcctctt 131
>42358_osa-MIR2118n:mirbase
Length = 179
Score = 60.0 bits (30), Expect = 6e-10
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 92 tggaggtggaaacttagtttcatgttttcctgatgcctctcattcctattgttcttaggt 151
|||||||||||| || |||| | |||||| |||||||| ||||||||| ||||||| |
Sbjct: 94 tggaggtggaaatttggtttggttttttcccgatgcctcccattcctatcgttcttaagc 153
Query: 152 gctccttcctcttccttt 169
|| ||||||||||||||
Sbjct: 154 acttcttcctcttccttt 171
Score = 52.0 bits (26), Expect = 1e-07
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 4 agccaggaagaggaagaaagagagtatctcagaattgtgggaatgagaccatgaaggaaa 63
|||||||||||||||||||||||| || ||| ||||||||| || |||| ||||||
Sbjct: 4 agccaggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaaa 63
Query: 64 gcctaa 69
||||||
Sbjct: 64 gcctaa 69
>42837_zma-MIR2118a:mirbase
Length = 118
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 118 ttcctgatgcctctcattcctattgttcttagg 150
||||||||||||||||||||||| |||||||||
Sbjct: 86 ttcctgatgcctctcattcctatggttcttagg 118
>42359_osa-MIR2118o:mirbase
Length = 155
Score = 56.0 bits (28), Expect = 9e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 119 tcctgatgcctctcattcctattgttcttaggtgctccttcctcttcc 166
|||||||||||| || |||||||||| | ||||||||||||||||||
Sbjct: 108 tcctgatgcctcccaagcctattgttccttggtgctccttcctcttcc 155
>42361_osa-MIR2118q:mirbase
Length = 177
Score = 54.0 bits (27), Expect = 4e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 115 gttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttt 169
||||||| |||||||| ||||||| | |||||||| |||||||||||||||||
Sbjct: 115 gttttcccgatgcctcctattcctaccgatcttaggtactccttcctcttccttt 169
>42357_osa-MIR2118m:mirbase
Length = 170
Score = 54.0 bits (27), Expect = 4e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 116 ttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttttggct 174
||||||||||||||| |||||||| |||||||||| || |||||||| |||| ||||
Sbjct: 106 ttttcctgatgcctcccattcctacagttcttaggtccttgttcctcttactttcggct 164
>42843_zma-MIR2118g:mirbase
Length = 145
Score = 50.1 bits (25), Expect = 6e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 113 atgttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttttgg 172
|||||||||||||||||| ||||||| | |||||||| |||||||| |||||| |||
Sbjct: 85 atgttttcctgatgcctcctattcctaaggctcttaggttctccttccctttccttatgg 144
Query: 173 c 173
|
Sbjct: 145 c 145
>42838_zma-MIR2118b:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 117 tttcctgatgcctctcattcctattgttctta 148
||||| |||||||| |||||||||||||||||
Sbjct: 87 tttcccgatgcctcccattcctattgttctta 118
