miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42346_osa-MIR2118b:mirbase
Length = 179
Score = 89.7 bits (45), Expect = 7e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 117 tttttcccgatgcctcccattcctatcgttcttaagcacttcttcctcttcctttcagct 176
|||||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct: 117 tttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 176
Query: 177 c 177
|
Sbjct: 177 c 177
Score = 83.8 bits (42), Expect = 4e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 tgagccaggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggagga 61
||||| |||||||||||||||||| || ||||||||||||||||||||||||| |||||
Sbjct: 2 tgagcgaggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagagga 61
Query: 62 aa 63
||
Sbjct: 62 aa 63
>42361_osa-MIR2118q:mirbase
Length = 177
Score = 81.8 bits (41), Expect = 2e-16
Identities = 139/169 (82%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaaagccta 68
||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||
Sbjct: 9 ggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaagcct- 67
Query: 69 aaaaccaaatttcttcctccagcaatggaggtggaaatttggtttggttttttcccgatg 128
|| | |||||| | |||||| | |||| | |||||||| | | | |||||||||||
Sbjct: 68 gaagctaaattttctactccagtatcggagttagaaatttgctct-gcgttttcccgatg 126
Query: 129 cctcccattcctatcgttcttaagcacttcttcctcttcctttcagctc 177
||||| ||||||| || ||||| | ||| |||||||||||||| |||||
Sbjct: 127 cctcctattcctaccgatcttaggtactccttcctcttcctttaagctc 175
>42838_zma-MIR2118b:mirbase
Length = 118
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 32 taagagcagtgggaatgggaacatggaggaaagcc 66
|||||||||||||||||||||||||||||||||||
Sbjct: 1 taagagcagtgggaatgggaacatggaggaaagcc 35
>42349_osa-MIR2118e:mirbase
Length = 177
Score = 69.9 bits (35), Expect = 6e-13
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 1 gtgagccaggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggagg 60
||||| |||||||||||||||| |||||| |||||||||| || |||||||||||||||
Sbjct: 2 gtgagtcaggaagaggaagaaa-agagagtctaagagcagcaggcatgggaacatggagg 60
Query: 61 aaa 63
|||
Sbjct: 61 aaa 63
Score = 52.0 bits (26), Expect = 1e-07
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 96 gaggtggaaatttggtttggttttttcccgatgcctcccattcctatcgttcttaagcac 155
||||| |||||||| | || |||||||| ||||||||||| |||| ||||||| ||||
Sbjct: 97 gaggttgaaatttgctgtgtgtttttcccaatgcctcccatgcctacagttcttaggcac 156
Query: 156 ttcttcctcttcct 169
| ||||| ||||||
Sbjct: 157 tccttccacttcct 170
>42841_zma-MIR2118e:mirbase
Length = 143
Score = 67.9 bits (34), Expect = 2e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaaagc 65
|||||| |||||||||||| | ||||||||||||||||||| |||||| ||||||||
Sbjct: 4 aggaagtggaagaaagagaatgtctaagagcagtgggaatggaaacatgaaggaaagc 61
Score = 44.1 bits (22), Expect = 4e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaagcacttcttcctcttccttt 171
|||||| |||| |||||||||||| ||||||| | || ||||||||||||||
Sbjct: 88 ttttcctgatgtctcccattcctacggttcttaggtgctccttcctcttccttt 141
>42362_osa-MIR2118r:mirbase
Length = 175
Score = 67.9 bits (34), Expect = 2e-12
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaa 62
|||||||||||||| |||| | |||||||||||||| |||||||||||||||||
Sbjct: 9 ggaagaggaagaaa-agagggtctaagagcagtgggcatgggaacatggaggaa 61
Score = 42.1 bits (21), Expect = 1e-04
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 117 tttttcccgatgcctcccattcctatcgttcttaagcacttcttcctcttcct 169
|||||||| ||||||||||| |||| ||||||| | ||| ||||| ||||||
Sbjct: 113 tttttcccaatgcctcccatgcctacagttcttaggtactccttccccttcct 165
>42360_osa-MIR2118p:mirbase
Length = 174
Score = 67.9 bits (34), Expect = 2e-12
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 7 caggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaaag 64
|||||||||||||||| |||| |||||||| |||||| |||||||||||||||||||
Sbjct: 7 caggaagaggaagaaa-agagtacctaagagtagtgggcatgggaacatggaggaaag 63
Score = 46.1 bits (23), Expect = 9e-06
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaagcacttcttcctcttcc 168
||||||||||||||||||| ||||| || |||| | || |||||||||||
Sbjct: 113 ttttcccgatgcctcccatgcctattgtccttaggtgctccttcctcttcc 163
>42350_osa-MIR2118f:mirbase
Length = 169
Score = 67.9 bits (34), Expect = 2e-12
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 gtgagccagg-aagaggaagaaagagagagcctaagagcagtgggaatgggaacatggag 59
|||||||||| ||||||||||| ||||| | || ||||||||||||||||||||||||
Sbjct: 1 gtgagccagggaagaggaagaacgagagggttcaatagcagtgggaatgggaacatggag 60
Query: 60 gaaagc 65
||||||
Sbjct: 61 gaaagc 66
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttctt 149
|||||| |||||||||||||||||| ||||||
Sbjct: 107 ttttcctgatgcctcccattcctattgttctt 138
>42354_osa-MIR2118j:mirbase
Length = 171
Score = 65.9 bits (33), Expect = 1e-11
Identities = 58/66 (87%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 1 gtgagccaggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggagg 60
|||||||||||||||||||| |||| ||||||||||| |||||||||||||| |||
Sbjct: 2 gtgagccaggaagaggaaga----gagactctaagagcagtaggaatgggaacatgaagg 57
Query: 61 aaagcc 66
||||||
Sbjct: 58 aaagcc 63
Score = 54.0 bits (27), Expect = 4e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaagcacttcttcctcttcctttcagct 176
|||||| |||||||||||||||||| ||||||| | || |||||||| |||||||||
Sbjct: 107 ttttcctgatgcctcccattcctatagttcttaggtgctcgttcctcttactttcagct 165
>42348_osa-MIR2118d:mirbase
Length = 176
Score = 63.9 bits (32), Expect = 4e-11
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 7 caggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaaagcc 66
|||||||||||||||| |||| | || ||||| ||||| |||||||||||||||||||||
Sbjct: 7 caggaagaggaagaaa-agagggtctgagagcggtgggcatgggaacatggaggaaagcc 65
>42839_zma-MIR2118c:mirbase
Length = 133
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 31 ctaagagcagtgggaatgggaacatggaggaaagccta 68
|||||||||||||| ||||||||||||||||| |||||
Sbjct: 22 ctaagagcagtgggcatgggaacatggaggaaggccta 59
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 126 atgcctcccattcctatcgttctta 150
|||||||||||||||||||||||||
Sbjct: 91 atgcctcccattcctatcgttctta 115
>42355_osa-MIR2118k:mirbase
Length = 177
Score = 60.0 bits (30), Expect = 6e-10
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 94 tggaggtggaaatttggtttggttttttcccgatgcctcccattcctatcgttcttaagc 153
|||||||||||| || |||| | |||||| |||||||| ||||||||| ||||||| |
Sbjct: 92 tggaggtggaaacttagtttcatgttttcctgatgcctctcattcctattgttcttaggt 151
Query: 154 acttcttcctcttccttt 171
|| ||||||||||||||
Sbjct: 152 gctccttcctcttccttt 169
Score = 52.0 bits (26), Expect = 1e-07
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 4 agccaggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaaa 63
|||||||||||||||||||||||| || ||| ||||||||| || |||| ||||||
Sbjct: 4 agccaggaagaggaagaaagagagtatctcagaattgtgggaatgagaccatgaaggaaa 63
Query: 64 gcctaa 69
||||||
Sbjct: 64 gcctaa 69
>42356_osa-MIR2118l:mirbase
Length = 177
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaaagcct 67
||||||||||||||| ||| | |||||| |||||||||||| ||||| ||||||||||
Sbjct: 9 aggaagaggaagaaattgagtgtctaagaacagtgggaatggaaacattaaggaaagcct 68
Query: 68 a 68
|
Sbjct: 69 a 69
>42353_osa-MIR2118i:mirbase
Length = 181
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaaagcct 67
||||||||||||||| ||| | ||||| ||| | ||||||||||||| |||||||||||
Sbjct: 8 aggaagaggaagaaattgagtgtctaagggcaatcggaatgggaacattgaggaaagcct 67
Query: 68 a 68
|
Sbjct: 68 a 68
Score = 52.0 bits (26), Expect = 1e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 127 tgcctcccattcctatcgttcttaagcacttcttcctcttcctttcagct 176
|||||||||||||||| || |||| ||| |||||||||||||||||||
Sbjct: 129 tgcctcccattcctattgtccttagatactccttcctcttcctttcagct 178
>42840_zma-MIR2118d:mirbase
Length = 148
Score = 56.0 bits (28), Expect = 9e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 21 aagagagagcctaagagcagtgggaatgggaacatggaggaaagccta 68
||||||| | |||||||||||||| ||||||||| ||||||| |||||
Sbjct: 17 aagagagggtctaagagcagtgggcatgggaacacggaggaaggccta 64
Score = 40.1 bits (20), Expect = 6e-04
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 120 ttcccgatgcctcccattcctatcgttcttaagcacttcttcctcttccttt 171
|||| |||||||||||| ||||||||| ||| | || ||||||||| ||||
Sbjct: 89 ttcctgatgcctcccatgcctatcgttgttaggtgctccttcctcttgcttt 140
>42357_osa-MIR2118m:mirbase
Length = 170
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 31 ctaagagcagtgggaatgggaacatggaggaaagcc 66
||||||||||| |||||||||||||| |||||||||
Sbjct: 27 ctaagagcagtaggaatgggaacatgaaggaaagcc 62
Score = 46.1 bits (23), Expect = 9e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaagcacttcttcctcttcctttc 172
|||||| ||||||||||||||||| ||||||| | ||| |||||||| |||||
Sbjct: 106 ttttcctgatgcctcccattcctacagttcttaggtccttgttcctcttactttc 160
>42345_osa-MIR2118a:mirbase
Length = 179
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttctt 149
||||| ||||||||||||||||||||||||||
Sbjct: 129 ttttctcgatgcctcccattcctatcgttctt 160
>42351_osa-MIR2118g:mirbase
Length = 160
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 31 ctaagagcagtgggaatgggaacatggaggaaag 64
|||||||| || ||||||||||||||||||||||
Sbjct: 30 ctaagagctgtaggaatgggaacatggaggaaag 63
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 126 atgcctcccattcctatcgttcttaagcacttcttcctcttccttt 171
||||||||||||||||| ||||||| | || ||||||||||||||
Sbjct: 107 atgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
>42347_osa-MIR2118c:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 41 tgggaatgggaacatggaggaaagcctaaa 70
||||||| ||||||||||||||||||||||
Sbjct: 1 tgggaataggaacatggaggaaagcctaaa 30
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattccta 141
|||||||||||||||| |||||||
Sbjct: 74 ttttcccgatgcctcctattccta 97
>42288_osa-MIR1869:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 30 cctaagagcagtgggaatgggaacatggaggaaagcct 67
|||||||||| | || ||||||||||||||||||||||
Sbjct: 128 cctaagagcattaggcatgggaacatggaggaaagcct 91
>42842_zma-MIR2118f:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 32 taagagcagtgggaatgggaacatggaggaaagcc 66
||||||||||||| |||||||||| | ||||||||
Sbjct: 1 taagagcagtgggcatgggaacataggggaaagcc 35
>42359_osa-MIR2118o:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 4e-05
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaa 62
|||||||||||||| |||| ||| | |||||||||| ||||| ||||| |||||
Sbjct: 1 ggaagaggaagaaa-agagggccaaggagcagtgggcatggggacatgaaggaa 53
