miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42347_osa-MIR2118c:mirbase
Length = 97
Score = 127 bits (64), Expect = 3e-30
Identities = 91/99 (91%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 41 tgggaataggaacatggaggaaagcctgaagctaaattttctactccagtatcggagtta 100
||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||
Sbjct: 1 tgggaataggaacatggaggaaagcctaaagctaaattttctgctccagtattggagcta 60
Query: 101 gaaatttgctctgcgttttcccgatgcctcctattccta 139
|| |||||||| |||||||||||||||||||||||||
Sbjct: 61 gagatttgctc--agttttcccgatgcctcctattccta 97
>42346_osa-MIR2118b:mirbase
Length = 179
Score = 83.8 bits (42), Expect = 4e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 116 ttttcccgatgcctcctattcctaccgatcttaggtactccttcctcttcctttaagctc 175
|||||||||||||||| ||||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagctc 177
Query: 176 at 177
||
Sbjct: 178 at 179
Score = 46.1 bits (23), Expect = 9e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaa 63
||||||||||||||||| ||||||||| ||||||| ||||||| |||||||
Sbjct: 9 ggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
>42358_osa-MIR2118n:mirbase
Length = 179
Score = 81.8 bits (41), Expect = 2e-16
Identities = 139/169 (82%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaagcct- 67
||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||
Sbjct: 9 ggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaaagccta 68
Query: 68 gaagctaaattttctactccagtatcggagttagaaatttgctct-gcgttttcccgatg 126
|| | |||||| | |||||| | |||| | |||||||| | | | |||||||||||
Sbjct: 69 aaaaccaaatttcttcctccagcaatggaggtggaaatttggtttggttttttcccgatg 128
Query: 127 cctcctattcctaccgatcttaggtactccttcctcttcctttaagctc 175
||||| ||||||| || ||||| | ||| |||||||||||||| |||||
Sbjct: 129 cctcccattcctatcgttcttaagcacttcttcctcttcctttcagctc 177
>42841_zma-MIR2118e:mirbase
Length = 143
Score = 61.9 bits (31), Expect = 1e-10
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 115 gttttcccgatgcctcctattcctaccgatcttaggtactccttcctcttccttt 169
||||||| |||| |||| |||||||| | |||||||| |||||||||||||||||
Sbjct: 87 gttttcctgatgtctcccattcctacggttcttaggtgctccttcctcttccttt 141
Score = 44.1 bits (22), Expect = 4e-05
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaagcctg 68
||||| |||||||||||| ||||||||| ||||||| | |||||| |||||||| ||
Sbjct: 5 ggaagtggaagaaagagaatgtctaagagcagtgggaatggaaacatgaaggaaagcatg 64
Query: 69 aa 70
||
Sbjct: 65 aa 66
>42362_osa-MIR2118r:mirbase
Length = 175
Score = 56.0 bits (28), Expect = 9e-09
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 116 ttttcccgatgcctcctattcctaccgatcttaggtactccttcctcttcct 167
||||||| |||||||| || ||||| | ||||||||||||||||| ||||||
Sbjct: 114 ttttcccaatgcctcccatgcctacagttcttaggtactccttccccttcct 165
Score = 46.1 bits (23), Expect = 9e-06
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 8 gggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaa 62
||||||||||||||| |||| ||||||||| |||| || ||||||||||||||
Sbjct: 8 gggaagaggaagaaa-agagggtctaagagcagtgggcatgggaacatggaggaa 61
>42355_osa-MIR2118k:mirbase
Length = 177
Score = 54.0 bits (27), Expect = 4e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 115 gttttcccgatgcctcctattcctaccgatcttaggtactccttcctcttccttt 169
||||||| |||||||| ||||||| | |||||||| |||||||||||||||||
Sbjct: 115 gttttcctgatgcctctcattcctattgttcttaggtgctccttcctcttccttt 169
>42843_zma-MIR2118g:mirbase
Length = 145
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 115 gttttcccgatgcctcctattcctaccgatcttaggtactccttcc 160
||||||| ||||||||||||||||| | |||||||| ||||||||
Sbjct: 87 gttttcctgatgcctcctattcctaaggctcttaggttctccttcc 132
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 30 tctaagagcgatgggaataggaacatggaggaaagc 65
||||||||| | |||||||||||||| ||||||||
Sbjct: 22 tctaagagcactaggaataggaacatgaaggaaagc 57
>42351_osa-MIR2118g:mirbase
Length = 160
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 124 atgcctcctattcctaccgatcttaggtactccttcctcttccttt 169
|||||||| ||||||| | |||||||| |||||||||||||||||
Sbjct: 107 atgcctcccattcctattgttcttaggtgctccttcctcttccttt 152
Score = 44.1 bits (22), Expect = 4e-05
Identities = 49/57 (85%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 8 gggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaag 64
||||||||||||| |||| | ||||||||| | ||||| ||||||||||||||||
Sbjct: 9 gggaagaggaagacagaggg--tctaagagctgtaggaatgggaacatggaggaaag 63
>42348_osa-MIR2118d:mirbase
Length = 176
Score = 52.0 bits (26), Expect = 1e-07
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaagcc 66
|||||||||||||| |||| ||| |||||| |||| || ||||||||||||||||||
Sbjct: 9 ggaagaggaagaaa-agagggtctgagagcggtgggcatgggaacatggaggaaagcc 65
>42360_osa-MIR2118p:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 115 gttttcccgatgcctcctattcctaccgatcttaggtactccttcctcttcc 166
||||||||||||||||| || |||| | ||||||| ||||||||||||||
Sbjct: 112 gttttcccgatgcctcccatgcctattgtccttaggtgctccttcctcttcc 163
>42350_osa-MIR2118f:mirbase
Length = 169
Score = 48.1 bits (24), Expect = 2e-06
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 6 cagggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaagc 65
|||||||||||||||| ||||| | || ||| ||||||| |||||||||||||||||
Sbjct: 7 cagggaagaggaagaacgagagggttcaatagcagtgggaatgggaacatggaggaaagc 66
>42838_zma-MIR2118b:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 32 taagagcgatgggaataggaacatggaggaaagcc 66
||||||| ||||||| ||||||||||||||||||
Sbjct: 1 taagagcagtgggaatgggaacatggaggaaagcc 35
>42353_osa-MIR2118i:mirbase
Length = 181
Score = 46.1 bits (23), Expect = 9e-06
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaagcct 67
|||||||||||||| ||| |||||| || || ||||| ||||||| |||||||||||
Sbjct: 9 ggaagaggaagaaattgagtgtctaagggcaatcggaatgggaacattgaggaaagcct 67
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 145 cttaggtactccttcctcttcctttaagct 174
||||| ||||||||||||||||||| ||||
Sbjct: 149 cttagatactccttcctcttcctttcagct 178
>42345_osa-MIR2118a:mirbase
Length = 179
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 8 gggaagaggaagaaagagagcctctaagag 37
|||||||||||||||||||| ||| |||||
Sbjct: 1 gggaagaggaagaaagagaggctccaagag 30
>42839_zma-MIR2118c:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 124 atgcctcctattcctaccgatcttaggtactccttcctctt 164
|||||||| ||||||| || |||||||| |||||||||||
Sbjct: 91 atgcctcccattcctatcgttcttaggtgatccttcctctt 131
>42840_zma-MIR2118d:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 5e-04
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 118 ttcccgatgcctcctattcctaccgatcttaggtactccttcctcttccttt 169
|||| ||||||||| || |||| || | |||||| |||||||||||| ||||
Sbjct: 89 ttcctgatgcctcccatgcctatcgttgttaggtgctccttcctcttgcttt 140
>42356_osa-MIR2118l:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 146 ttaggtactccttcctcttccttt 169
|||| |||||||||||||||||||
Sbjct: 149 ttagatactccttcctcttccttt 172
