miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42368_osa-MIR2123b:mirbase
Length = 185
Score = 363 bits (183), Expect = e-101
Identities = 183/183 (100%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaattttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaattttaag 124
Query: 61 taattatttattcttttcatatcatttgattccttgttaaatgtattttcatgtacacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 taattatttattcttttcatatcatttgattccttgttaaatgtattttcatgtacacat 64
Query: 121 ctagttttacatatttcacaagacgaacggtcagacatgtactaaaaagtcaacggtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ctagttttacatatttcacaagacgaacggtcagacatgtactaaaaagtcaacggtgtc 4
Query: 181 aaa 183
|||
Sbjct: 3 aaa 1
Score = 60.0 bits (30), Expect = 6e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 140 aagacgaacggtcagacatgtactaaaaagtcaacggtgtcaaaca 185
|||||||| ||||| ||| || ||||||||||||||||||||||||
Sbjct: 140 aagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaaca 185
Score = 56.0 bits (28), Expect = 1e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtctt 44
|||||||||||||||||||||| || ||| ||||| ||||||||
Sbjct: 1 tttgacaccgttgactttttagtacatgtctgaccgttcgtctt 44
>42112_osa-MIR806c:mirbase
Length = 270
Score = 186 bits (94), Expect = 4e-48
Identities = 127/138 (92%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaattttaag 60
|||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||
Sbjct: 39 tttgacaccgttgactttttagtacgtatttgatcattcgtcttattcaaaaaatttaag 98
Query: 61 taattatttattcttttcatatcatttgattccttgttaaatgtattttcatgtacacat 120
|||||||||||| |||||||||| ||||||| ||||||||| || ||||||||||||||
Sbjct: 99 taattatttatttttttcatatcgtttgatttattgttaaatatactttcatgtacacat 158
Query: 121 ctagttttacatatttca 138
|||||||||||||||||
Sbjct: 159 atagttttacatatttca 176
Score = 89.7 bits (45), Expect = 7e-19
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaa 53
|||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 235 tttgacaccgttgactttttagcacatgtttgaccattcgtcttattcaaaaa 183
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 159 gtactaaaaagtcaacggtgtcaaaca 185
|||||||||||||||||||||||||||
Sbjct: 63 gtactaaaaagtcaacggtgtcaaaca 37
>42116_osa-MIR806g:mirbase
Length = 240
Score = 184 bits (93), Expect = 2e-47
Identities = 172/200 (86%), Gaps = 15/200 (7%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattc-aaaaattttaa 59
|||||||||| ||||||||||| |||||||||| ||||||| |||||| ||||| ||||
Sbjct: 22 tttgacaccgctgactttttagtacgtgtttgatcattcgttttattccaaaaaaattaa 81
Query: 60 gtaattatttattcttttcatatcatttgattccttgttaaatgtattttcatgtacaca 119
|||||||||||||||||| |||||||||||||| ||||||||| || |||||||||||||
Sbjct: 82 gtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtacaca 141
Query: 120 tctagttttacatatttcac--------------aagacgaacggtcagacatgtactaa 165
| |||||||||||||||||| |||||||||||||| |||||| ||||
Sbjct: 142 tgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtgctaa 201
Query: 166 aaagtcaacggtgtcaaaca 185
||||||||||||||||||||
Sbjct: 202 aaagtcaacggtgtcaaaca 221
Score = 81.8 bits (41), Expect = 2e-16
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaa 53
|||||||||||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 219 tttgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaa 167
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 159 gtactaaaaagtcaacggtgtcaaaca 185
|||||||||||||| ||||||||||||
Sbjct: 46 gtactaaaaagtcagcggtgtcaaaca 20
>42111_osa-MIR806b:mirbase
Length = 215
Score = 180 bits (91), Expect = 2e-46
Identities = 132/143 (92%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttagg-acgtgtttgaccattcgtcttattcaaaaat-ttta 58
||||||||||||||||||||| | ||||||||||| |||||||||||||||||| ||||
Sbjct: 9 tttgacaccgttgactttttaagtacgtgtttgactattcgtcttattcaaaaaaattta 68
Query: 59 agtaattatttattcttttcatatcatttgattccttgttaaatgtattttcatgtacac 118
||||||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||
Sbjct: 69 agtaattatttattctttttatatcatttgattcattgttaaatatactttcatgtacac 128
Query: 119 atctagttttacatatttcacaa 141
|| || |||||||||||||||||
Sbjct: 129 atataattttacatatttcacaa 151
Score = 50.1 bits (25), Expect = 6e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaa 53
|||||||||||||||||||||| || | ||||| ||||||||||| |||||
Sbjct: 207 tttgacaccgttgactttttagcacattcttgactgttcgtcttattaaaaaa 155
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 163 taaaaagtcaacggtgtcaaaca 185
|||||||||||||||||||||||
Sbjct: 29 taaaaagtcaacggtgtcaaaca 7
>42110_osa-MIR806a:mirbase
Length = 252
Score = 180 bits (91), Expect = 2e-46
Identities = 129/139 (92%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttagg-acgtgtttgaccattcgtcttattcaaaaattttaa 59
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 30 tttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaa 89
Query: 60 gtaattatttattcttttcatatcatttgattccttgttaaatgtattttcatgtacaca 119
|||||||||||||||||||||| |||||||||| ||||||||| || |||||||||||||
Sbjct: 90 gtaattatttattcttttcata-catttgattcattgttaaatatactttcatgtacaca 148
Query: 120 tctagttttacatatttca 138
| ||||||||| |||||||
Sbjct: 149 tatagttttacgtatttca 167
Score = 61.9 bits (31), Expect = 2e-10
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttatt 47
|||||||||||||||||||||| || ||||| ||| |||||||||||
Sbjct: 225 tttgacaccgttgactttttagcacatgtttaaccgttcgtcttatt 179
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 163 taaaaagtcaacggtgtcaaaca 185
|||||||||||||||||||||||
Sbjct: 50 taaaaagtcaacggtgtcaaaca 28
>42113_osa-MIR806d:mirbase
Length = 271
Score = 176 bits (89), Expect = 4e-45
Identities = 128/141 (90%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaattttaag 60
||||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||
Sbjct: 37 tttgataccgttgagtttttaatacgtgtttgaccattcgttttattcaaaaaatttaaa 96
Query: 61 taattatttattcttttcatatcatttgattccttgttaaatgtattttcatgtacacat 120
|||||||||||||||||||||||||||||||| ||||||||| || |||||| | |||||
Sbjct: 97 taattatttattcttttcatatcatttgattcattgttaaatatactttcatatgcacat 156
Query: 121 ctagttttacatatttcacaa 141
||||||||||||||||||||
Sbjct: 157 atagttttacatatttcacaa 177
Score = 65.9 bits (33), Expect = 1e-11
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaa 53
|||||||||||||||||||||| || ||||||||| || ||||||||| ||||
Sbjct: 233 tttgacaccgttgactttttagcacatgtttgaccgttagtcttattctaaaa 181
>42114_osa-MIR806e:mirbase
Length = 255
Score = 147 bits (74), Expect = 3e-36
Identities = 164/197 (83%), Gaps = 14/197 (7%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaattttaag 60
|||||| ||||||||||||||| | ||||||||| ||||||||||||||||| ||||||
Sbjct: 30 tttgacgccgttgactttttagcatatgtttgaccgttcgtcttattcaaaaaatttaag 89
Query: 61 taattatttattcttttcatatcatttgattccttgttaaatgtattttcatgtacacat 120
|||||||| ||||||||| |||||||| ||| ||||||||| |||||| ||||| |||
Sbjct: 90 taattattaattcttttcttatcatttaatttattgttaaatatatttttatgtaggcat 149
Query: 121 ctagttttacatatttcac--------------aagacgaacggtcagacatgtactaaa 166
|| ||||||||||||||| |||||||||||||| |||||| |||||
Sbjct: 150 ataattttacatatttcacaaaagtttttaaataagacgaacggtcaaacatgtgctaaa 209
Query: 167 aagtcaacggtgtcaaa 183
|||||||||||||||||
Sbjct: 210 aagtcaacggtgtcaaa 226
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaa 53
|||||||||||||||||||||| || ||||||||| ||||||||||| |||||
Sbjct: 226 tttgacaccgttgactttttagcacatgtttgaccgttcgtcttatttaaaaa 174
Score = 60.0 bits (30), Expect = 6e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 140 aagacgaacggtcagacatgtactaaaaagtcaacggtgtcaaaca 185
|||||||||||||| |||| | ||||||||||||||| ||||||||
Sbjct: 73 aagacgaacggtcaaacatatgctaaaaagtcaacggcgtcaaaca 28
>42117_osa-MIR806h:mirbase
Length = 271
Score = 139 bits (70), Expect = 8e-34
Identities = 118/134 (88%)
Strand = Plus / Plus
Query: 8 ccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaattttaagtaattat 67
|||||||||||||| | ||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 42 ccgttgactttttatcatatgtttgaccgttcgtcttattcaaaaaatttaagtaattat 101
Query: 68 ttattcttttcatatcatttgattccttgttaaatgtattttcatgtacacatctagttt 127
| ||||||||| ||||||||||||| ||||||||| |||||| ||||| ||| || |||
Sbjct: 102 taattcttttcctatcatttgattcattgttaaatatatttttatgtaggcatataattt 161
Query: 128 tacatatttcacaa 141
||||||| ||||||
Sbjct: 162 tacatatctcacaa 175
Score = 89.7 bits (45), Expect = 7e-19
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaa 53
|||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 231 tttgacaccgttgactttttagcacatgtttgaccattcgtcttattcaaaaa 179
Score = 44.1 bits (22), Expect = 4e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 140 aagacgaacggtcagacatgtactaaaaagtcaacggtgtcaaaca 185
|||||||||||||| |||| | |||||||||||||| || |||||
Sbjct: 78 aagacgaacggtcaaacatatgataaaaagtcaacggcgttaaaca 33
>42115_osa-MIR806f:mirbase
Length = 241
Score = 115 bits (58), Expect = 1e-26
Identities = 118/138 (85%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaattttaag 60
|||||| |||||||||||||| || ||||||||| ||||||||||||||||| |||
Sbjct: 23 tttgacgccgttgactttttattacatgtttgaccgttcgtcttattcaaaaaattttga 82
Query: 61 taattatttattcttttcatatcatttgattccttgttaaatgtattttcatgtacacat 120
| ||| | ||||||||| ||||||||||||| ||||||||| |||||||||||| |||
Sbjct: 83 cacttaataattcttttcctatcatttgattcattgttaaatatattttcatgtaggcat 142
Query: 121 ctagttttacatatttca 138
|| ||||||||||||||
Sbjct: 143 ataattttacatatttca 160
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaa 53
|||||||||||||||||||||| || |||||||| |||||||||||||||||
Sbjct: 219 tttgacaccgttgactttttagcacatgtttgactgttcgtcttattcaaaaa 167
Score = 67.9 bits (34), Expect = 3e-12
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 140 aagacgaacggtcagacatgtactaaaaagtcaacggtgtcaaaca 185
|||||||||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 66 aagacgaacggtcaaacatgtaataaaaagtcaacggcgtcaaaca 21
>42369_osa-MIR2123c:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtcttattcaaaaa 53
|||||||| ||||||||||||| || ||||||||||||||||||||| |||||
Sbjct: 1 tttgacactgttgactttttagcacatgtttgaccattcgtcttattaaaaaa 53
Score = 56.0 bits (28), Expect = 1e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 140 aagacgaacggtcagacatgtactaaaaagtcaacggtgtcaaa 183
|||||||| ||||| |||||| ||||||||||||| ||||||||
Sbjct: 44 aagacgaatggtcaaacatgtgctaaaaagtcaacagtgtcaaa 1
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttaggacgtgttt 31
|||||||||||||||||||||| ||||||||
Sbjct: 82 tttgacaccgttgactttttagtacgtgttt 52
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 159 gtactaaaaagtcaacggtgtcaaaca 185
|||||||||||||||||||||||||||
Sbjct: 58 gtactaaaaagtcaacggtgtcaaaca 84
>42313_osa-MIR1884a:mirbase
Length = 214
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 28 gtttgaccattcgtcttattcaaaaattt 56
|||||||||||||||||||||||||||||
Sbjct: 36 gtttgaccattcgtcttattcaaaaattt 64
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 28 gtttgaccattcgtcttattcaaaaa 53
|||||||||||| |||||||||||||
Sbjct: 178 gtttgaccattcatcttattcaaaaa 153
>42314_osa-MIR1884b:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 ttgaccattcgtcttattcaaaaa 53
||||| ||||||||||||||||||
Sbjct: 43 ttgacaattcgtcttattcaaaaa 66
