miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42367_osa-MIR2123a:mirbase
Length = 185
Score = 363 bits (183), Expect = e-101
Identities = 183/183 (100%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttagtacatgtctgaccgttcgtcttgtgaaatatgtaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tttgacaccgttgactttttagtacatgtctgaccgttcgtcttgtgaaatatgtaaaac 124
Query: 61 tagatgtgtacatgaaaatacatttaacaaggaatcaaatgatatgaaaagaataaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tagatgtgtacatgaaaatacatttaacaaggaatcaaatgatatgaaaagaataaataa 64
Query: 121 ttacttaaaatttttgaataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ttacttaaaatttttgaataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtc 4
Query: 181 aaa 183
|||
Sbjct: 3 aaa 1
Score = 60.0 bits (30), Expect = 6e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 140 aagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaaca 185
|||||||| ||||| ||| || ||||||||||||||||||||||||
Sbjct: 140 aagacgaacggtcagacatgtactaaaaagtcaacggtgtcaaaca 185
Score = 56.0 bits (28), Expect = 1e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttagtacatgtctgaccgttcgtctt 44
|||||||||||||||||||||| || ||| ||||| ||||||||
Sbjct: 1 tttgacaccgttgactttttaggacgtgtttgaccattcgtctt 44
>42112_osa-MIR806c:mirbase
Length = 270
Score = 190 bits (96), Expect = 3e-49
Identities = 129/140 (92%)
Strand = Plus / Minus
Query: 46 tgaaatatgtaaaactagatgtgtacatgaaaatacatttaacaaggaatcaaatgatat 105
||||||||||||||||| |||||||||||||| || ||||||||| ||||||| |||||
Sbjct: 176 tgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaataaatcaaacgatat 117
Query: 106 gaaaagaataaataattacttaaaatttttgaataagacgaatggtcaaacacgtcctaa 165
||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||
Sbjct: 116 gaaaaaaataaataattacttaaattttttgaataagacgaatgatcaaatacgtactaa 57
Query: 166 aaagtcaacggtgtcaaaca 185
||||||||||||||||||||
Sbjct: 56 aaagtcaacggtgtcaaaca 37
Score = 93.7 bits (47), Expect = 4e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 131 tttttgaataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaaca 185
||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 183 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 237
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttagtac 25
|||||||||||||||||||||||||
Sbjct: 39 tttgacaccgttgactttttagtac 63
>42116_osa-MIR806g:mirbase
Length = 240
Score = 184 bits (93), Expect = 2e-47
Identities = 172/200 (86%), Gaps = 15/200 (7%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttagtacatgtctgaccgttcgtctt--------------gt 46
|||||||||||||||||||||| |||||| |||||||||||||| ||
Sbjct: 219 tttgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaaagttagt 160
Query: 47 gaaatatgtaaaactagatgtgtacatgaaaatacatttaacaaggaatcaaatgatatg 106
|||||||||||||||| |||||||||||||| || ||||||||| ||||||||||||||
Sbjct: 159 gaaatatgtaaaactacatgtgtacatgaaagtatatttaacaatgaatcaaatgatata 100
Query: 107 aaaagaataaataattacttaaaattttt-gaataagacgaatggtcaaacacgtcctaa 165
|||||||||||||||||||||| ||||| |||||| ||||||| |||||||||| ||||
Sbjct: 99 aaaagaataaataattacttaatttttttggaataaaacgaatgatcaaacacgtactaa 40
Query: 166 aaagtcaacggtgtcaaaca 185
||||||| ||||||||||||
Sbjct: 39 aaagtcagcggtgtcaaaca 20
Score = 85.7 bits (43), Expect = 1e-17
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 131 tttttgaataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaaca 185
||||||||||||||||| ||||||||| || ||||||||||||||||||||||||
Sbjct: 167 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttagtac 25
|||||||||| ||||||||||||||
Sbjct: 22 tttgacaccgctgactttttagtac 46
>42111_osa-MIR806b:mirbase
Length = 215
Score = 184 bits (93), Expect = 2e-47
Identities = 134/145 (92%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 43 ttgtgaaatatgtaaaactagatgtgtacatgaaaatacatttaacaaggaatcaaatga 102
||||||||||||||||| || |||||||||||||| || ||||||||| |||||||||||
Sbjct: 151 ttgtgaaatatgtaaaattatatgtgtacatgaaagtatatttaacaatgaatcaaatga 92
Query: 103 tatgaaaagaataaataattacttaaa-atttttgaataagacgaatggtcaaacacgt- 160
||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 91 tataaaaagaataaataattacttaaatttttttgaataagacgaatagtcaaacacgta 32
Query: 161 cctaaaaagtcaacggtgtcaaaca 185
| |||||||||||||||||||||||
Sbjct: 31 cttaaaaagtcaacggtgtcaaaca 7
Score = 54.0 bits (27), Expect = 4e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 131 tttttgaataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaaca 185
||||| ||||||||||| ||||| | || ||||||||||||||||||||||||
Sbjct: 155 ttttttaataagacgaacagtcaagaatgtgctaaaaagtcaacggtgtcaaaca 209
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgacttttta 21
|||||||||||||||||||||
Sbjct: 9 tttgacaccgttgacttttta 29
>42110_osa-MIR806a:mirbase
Length = 252
Score = 184 bits (93), Expect = 2e-47
Identities = 131/141 (92%), Gaps = 2/141 (1%)
Strand = Plus / Minus
Query: 46 tgaaatatgtaaaactagatgtgtacatgaaaatacatttaacaaggaatcaaatgatat 105
||||||| ||||||||| |||||||||||||| || ||||||||| |||||||||| |||
Sbjct: 167 tgaaatacgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatg-tat 109
Query: 106 gaaaagaataaataattacttaaaatttttgaataagacgaatggtcaaacacgt-ccta 164
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 108 gaaaagaataaataattacttaaattttttgaataagacgaatggtcaaacacgtattta 49
Query: 165 aaaagtcaacggtgtcaaaca 185
|||||||||||||||||||||
Sbjct: 48 aaaagtcaacggtgtcaaaca 28
Score = 65.9 bits (33), Expect = 1e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 137 aataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaaca 185
||||||||||| ||| ||||| || ||||||||||||||||||||||||
Sbjct: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 227
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgacttttta 21
|||||||||||||||||||||
Sbjct: 30 tttgacaccgttgacttttta 50
>42113_osa-MIR806d:mirbase
Length = 271
Score = 180 bits (91), Expect = 2e-46
Identities = 130/143 (90%)
Strand = Plus / Minus
Query: 43 ttgtgaaatatgtaaaactagatgtgtacatgaaaatacatttaacaaggaatcaaatga 102
|||||||||||||||||||| ||||| | |||||| || ||||||||| |||||||||||
Sbjct: 177 ttgtgaaatatgtaaaactatatgtgcatatgaaagtatatttaacaatgaatcaaatga 118
Query: 103 tatgaaaagaataaataattacttaaaatttttgaataagacgaatggtcaaacacgtcc 162
||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 117 tatgaaaagaataaataattatttaaattttttgaataaaacgaatggtcaaacacgtat 58
Query: 163 taaaaagtcaacggtgtcaaaca 185
|||||| |||||||| |||||||
Sbjct: 57 taaaaactcaacggtatcaaaca 35
Score = 69.9 bits (35), Expect = 6e-13
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 131 tttttgaataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaaca 185
|||| ||||||||| || ||||||||| || ||||||||||||||||||||||||
Sbjct: 181 ttttagaataagactaacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 235
>42114_osa-MIR806e:mirbase
Length = 255
Score = 151 bits (76), Expect = 2e-37
Identities = 166/199 (83%), Gaps = 14/199 (7%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttagtacatgtctgaccgttcgtctt--------------gt 46
|||||||||||||||||||||| |||||| |||||||||||||| ||
Sbjct: 226 tttgacaccgttgactttttagcacatgtttgaccgttcgtcttatttaaaaacttttgt 167
Query: 47 gaaatatgtaaaactagatgtgtacatgaaaatacatttaacaaggaatcaaatgatatg 106
||||||||||||| || ||| ||||| |||||| ||||||||| ||| |||||||| |
Sbjct: 166 gaaatatgtaaaattatatgcctacataaaaatatatttaacaataaattaaatgataag 107
Query: 107 aaaagaataaataattacttaaaatttttgaataagacgaatggtcaaacacgtcctaaa 166
|||||||| |||||||||||||| ||||||||||||||||| ||||||||| | |||||
Sbjct: 106 aaaagaattaataattacttaaattttttgaataagacgaacggtcaaacatatgctaaa 47
Query: 167 aagtcaacggtgtcaaaca 185
|||||||||| ||||||||
Sbjct: 46 aagtcaacggcgtcaaaca 28
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 131 tttttgaataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaa 183
||||| ||||||||||| ||||||||| || ||||||||||||||||||||||
Sbjct: 174 tttttaaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaa 226
Score = 56.0 bits (28), Expect = 1e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttagtacatgtctgaccgttcgtctt 44
|||||| ||||||||||||||| | |||| ||||||||||||||
Sbjct: 30 tttgacgccgttgactttttagcatatgtttgaccgttcgtctt 73
>42117_osa-MIR806h:mirbase
Length = 271
Score = 141 bits (71), Expect = 2e-34
Identities = 125/143 (87%)
Strand = Plus / Minus
Query: 43 ttgtgaaatatgtaaaactagatgtgtacatgaaaatacatttaacaaggaatcaaatga 102
|||||| |||||||||| || ||| ||||| |||||| ||||||||| |||||||||||
Sbjct: 175 ttgtgagatatgtaaaattatatgcctacataaaaatatatttaacaatgaatcaaatga 116
Query: 103 tatgaaaagaataaataattacttaaaatttttgaataagacgaatggtcaaacacgtcc 162
|| ||||||||| |||||||||||||| ||||||||||||||||| ||||||||| |
Sbjct: 115 taggaaaagaattaataattacttaaattttttgaataagacgaacggtcaaacatatga 56
Query: 163 taaaaagtcaacggtgtcaaaca 185
|||||||||||||| || |||||
Sbjct: 55 taaaaagtcaacggcgttaaaca 33
Score = 93.7 bits (47), Expect = 4e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 131 tttttgaataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaaca 185
||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 179 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 233
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 8 ccgttgactttttagtacatgtctgaccgttcgtctt 44
|||||||||||||| | |||| ||||||||||||||
Sbjct: 42 ccgttgactttttatcatatgtttgaccgttcgtctt 78
>42115_osa-MIR806f:mirbase
Length = 241
Score = 119 bits (60), Expect = 8e-28
Identities = 120/140 (85%)
Strand = Plus / Minus
Query: 46 tgaaatatgtaaaactagatgtgtacatgaaaatacatttaacaaggaatcaaatgatat 105
|||||||||||||| || ||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 160 tgaaatatgtaaaattatatgcctacatgaaaatatatttaacaatgaatcaaatgatag 101
Query: 106 gaaaagaataaataattacttaaaatttttgaataagacgaatggtcaaacacgtcctaa 165
||||||||| | ||| | ||| ||||||||||||||||| ||||||||| || |||
Sbjct: 100 gaaaagaattattaagtgtcaaaattttttgaataagacgaacggtcaaacatgtaataa 41
Query: 166 aaagtcaacggtgtcaaaca 185
||||||||||| ||||||||
Sbjct: 40 aaagtcaacggcgtcaaaca 21
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 131 tttttgaataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaa 183
||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 167 tttttgaataagacgaacagtcaaacatgtgctaaaaagtcaacggtgtcaaa 219
Score = 63.9 bits (32), Expect = 4e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttagtacatgtctgaccgttcgtctt 44
|||||| |||||||||||||| ||||||| ||||||||||||||
Sbjct: 23 tttgacgccgttgactttttattacatgtttgaccgttcgtctt 66
>42369_osa-MIR2123c:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 131 tttttgaataagacgaatggtcaaacacgtcctaaaaagtcaacggtgtcaaa 183
||||| ||||||||||||||||||||| || ||||||||||||| ||||||||
Sbjct: 53 ttttttaataagacgaatggtcaaacatgtgctaaaaagtcaacagtgtcaaa 1
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 153 aaacacgtcctaaaaagtcaacggtgtcaaaca 185
|||||||| ||||||||||||||||||||||||
Sbjct: 52 aaacacgtactaaaaagtcaacggtgtcaaaca 84
Score = 56.0 bits (28), Expect = 1e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 tttgacaccgttgactttttagtacatgtctgaccgttcgtctt 44
|||||||| ||||||||||||| |||||| ||||| ||||||||
Sbjct: 1 tttgacactgttgactttttagcacatgtttgaccattcgtctt 44
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1 tttgacaccgttgactttttagtac 25
|||||||||||||||||||||||||
Sbjct: 82 tttgacaccgttgactttttagtac 58
>42313_osa-MIR1884a:mirbase
Length = 214
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 128 aaatttttgaataagacgaatggtcaaac 156
|||||||||||||||||||||||||||||
Sbjct: 64 aaatttttgaataagacgaatggtcaaac 36
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 131 tttttgaataagacgaatggtcaaac 156
||||||||||||| ||||||||||||
Sbjct: 153 tttttgaataagatgaatggtcaaac 178
>42314_osa-MIR1884b:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 131 tttttgaataagacgaatggtcaa 154
|||||||||||||||||| |||||
Sbjct: 66 tttttgaataagacgaattgtcaa 43
