miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42374_osa-MIR2124e:mirbase
Length = 247
Score = 311 bits (157), Expect = 1e-85
Identities = 226/248 (91%), Gaps = 2/248 (0%)
Strand = Plus / Plus
Query: 1 atgtttggacacatgcatgaagcattaaatgtgaaaaaataaaccaattgcacagattgc 60
||||||||||||||||||| || ||||||| | |||||| |||||||| |||| |||||
Sbjct: 1 atgtttggacacatgcatggagtattaaatataaaaaaa--aaccaattacacaaattgc 58
Query: 61 atgtaaatcgcgagacgaatcttttgagcctaattataccatgatttgacaatgtggtgc 120
||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 59 gtgtaaattgcgagacgaatcttttaagcctaattgctccatgatttgacaatgtggtgc 118
Query: 121 tacagtaaatatttgctaatgacggattaattaggcttaataaatttgtctcgcagttta 180
|||| |||| ||||||||||||| |||||||||| | ||||||||| |||||||||||||
Sbjct: 119 tacaataaacatttgctaatgacagattaattagacataataaattcgtctcgcagttta 178
Query: 181 caggcggaatctgtaatttgttttgttattagtctacgtttaatactttaaatgtgtgtc 240
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 taggcggaatatgtaatttgttttgttattagtctacgtttaatactttaaatgtgtgtc 238
Query: 241 cgtatatt 248
||||||||
Sbjct: 239 cgtatatt 246
>42373_osa-MIR2124d:mirbase
Length = 250
Score = 272 bits (137), Expect = 1e-73
Identities = 194/213 (91%)
Strand = Plus / Plus
Query: 36 aaaataaaccaattgcacagattgcatgtaaatcgcgagacgaatcttttgagcctaatt 95
|||| ||||||||| |||||| ||| ||||||| |||||| ||||||||| |||||||||
Sbjct: 37 aaaaaaaaccaatttcacagactgcgtgtaaattgcgagaggaatcttttaagcctaatt 96
Query: 96 ataccatgatttgacaatgtggtgctacagtaaatatttgctaatgacggattaattagg 155
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 97 gcgctatgatttgacaatgtggtgctacagtaaatatttgctaatgacgaattaattagg 156
Query: 156 cttaataaatttgtctcgcagtttacaggcggaatctgtaatttgttttgttattagtct 215
||||||||||| | |||||||||| | ||||||||||||||||| |||||||||||| ||
Sbjct: 157 cttaataaattcgactcgcagttttctggcggaatctgtaatttattttgttattagact 216
Query: 216 acgtttaatactttaaatgtgtgtccgtatatt 248
| |||||||||||||||||||||||||||||||
Sbjct: 217 atgtttaatactttaaatgtgtgtccgtatatt 249
>42079_osa-MIR442:mirbase
Length = 233
Score = 256 bits (129), Expect = 7e-69
Identities = 165/177 (93%)
Strand = Plus / Plus
Query: 62 tgtaaatcgcgagacgaatcttttgagcctaattataccatgatttgacaatgtggtgct 121
||||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 57 tgtaaattgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgct 116
Query: 122 acagtaaatatttgctaatgacggattaattaggcttaataaatttgtctcgcagtttac 181
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 117 acagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagtttac 176
Query: 182 aggcggaatctgtaatttgttttgttattagtctacgtttaatactttaaatgtgtg 238
|| |||| ||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 177 agacggattctgtaatttgttttgttattagtctacgttaaatacttcaaatgtgtg 233
>42376_osa-MIR2124g:mirbase
Length = 251
Score = 244 bits (123), Expect = 3e-65
Identities = 183/203 (90%)
Strand = Plus / Plus
Query: 46 aattgcacagattgcatgtaaatcgcgagacgaatcttttgagcctaattataccatgat 105
|||| |||||||||| ||||||| |||| ||||||||||| ||| ||||| |||||||
Sbjct: 48 aattacacagattgcgtgtaaattgcgacacgaatcttttaagcataattgctccatgat 107
Query: 106 ttgacaatgtggtgctacagtaaatatttgctaatgacggattaattaggcttaataaat 165
|||||||||| |||||||||||| |||||||||| ||| ||||||||| ||||||||||
Sbjct: 108 ctgacaatgtgatgctacagtaaacatttgctaataacgaattaattagtcttaataaat 167
Query: 166 ttgtctcgcagtttacaggcggaatctgtaatttgttttgttattagtctacgtttaata 225
| ||||||| ||||||||||||| ||| |||||||||||||||||||||||| |||||||
Sbjct: 168 tcgtctcgcggtttacaggcggattctctaatttgttttgttattagtctacatttaata 227
Query: 226 ctttaaatgtgtgtccgtatatt 248
|||||||||||||||||||||||
Sbjct: 228 ctttaaatgtgtgtccgtatatt 250
>42372_osa-MIR2124c:mirbase
Length = 248
Score = 240 bits (121), Expect = 4e-64
Identities = 190/213 (89%)
Strand = Plus / Plus
Query: 36 aaaataaaccaattgcacagattgcatgtaaatcgcgagacgaatcttttgagcctaatt 95
|||| ||||||||| ||||| || | ||||||| ||||||| |||||||| || ||||||
Sbjct: 35 aaaaaaaaccaattacacagtttacgtgtaaattgcgagacaaatcttttaagtctaatt 94
Query: 96 ataccatgatttgacaatgtggtgctacagtaaatatttgctaatgacggattaattagg 155
|||||||||||||| |||||| |||||||||||||||||||||| |||||||||||
Sbjct: 95 gcgccatgatttgacaacgtggtggtacagtaaatatttgctaatgatagattaattagg 154
Query: 156 cttaataaatttgtctcgcagtttacaggcggaatctgtaatttgttttgttattagtct 215
||||||||||| |||||| ||||| | ||||||||||||||||| |||||||||||| |
Sbjct: 155 cttaataaattcgtctcgtagttttctggcggaatctgtaatttattttgttattagaca 214
Query: 216 acgtttaatactttaaatgtgtgtccgtatatt 248
|||||||||||||||||||||||||||||||||
Sbjct: 215 acgtttaatactttaaatgtgtgtccgtatatt 247
>42378_osa-MIR2124i:mirbase
Length = 250
Score = 212 bits (107), Expect = 1e-55
Identities = 173/195 (88%)
Strand = Plus / Plus
Query: 54 agattgcatgtaaatcgcgagacgaatcttttgagcctaattataccatgatttgacaat 113
||||||| ||||||| | || ||||||||||| ||||||||| ||||||| |||||||
Sbjct: 55 agattgcgtgtaaattgtgaaacgaatcttttaagcctaattgctccatgatctgacaat 114
Query: 114 gtggtgctacagtaaatatttgctaatgacggattaattaggcttaataaatttgtctcg 173
|||||||||||||||| ||||| |||| | |||||||| |||||||||||||| | ||||
Sbjct: 115 gtggtgctacagtaaacatttgttaataatggattaatcaggcttaataaattcgcctcg 174
Query: 174 cagtttacaggcggaatctgtaatttgttttgttattagtctacgtttaatactttaaat 233
|||||||| | |||||||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 175 tagtttacaagtggaatctgtaatttgtttcgttgttagcctacgtttaatactttaaat 234
Query: 234 gtgtgtccgtatatt 248
|||||||||||||||
Sbjct: 235 gtgtgtccgtatatt 249
>42377_osa-MIR2124h:mirbase
Length = 275
Score = 198 bits (100), Expect = 1e-51
Identities = 130/140 (92%)
Strand = Plus / Plus
Query: 109 acaatgtggtgctacagtaaatatttgctaatgacggattaattaggcttaataaatttg 168
||||||||||||||||||||| || |||||| || |||||||||||||||||||||||||
Sbjct: 132 acaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttg 191
Query: 169 tctcgcagtttacaggcggaatctgtaatttgttttgttattagtctacgtttaatactt 228
|||||| ||||||| | ||||||||||||||||||| ||| ||||||| |||||||||||
Sbjct: 192 tctcgcggtttacaagtggaatctgtaatttgttttattactagtctatgtttaatactt 251
Query: 229 taaatgtgtgtccgtatatt 248
||||||||||||||||||||
Sbjct: 252 taaatgtgtgtccgtatatt 271
>42375_osa-MIR2124f:mirbase
Length = 252
Score = 184 bits (93), Expect = 2e-47
Identities = 171/197 (86%)
Strand = Plus / Plus
Query: 52 acagattgcatgtaaatcgcgagacgaatcttttgagcctaattataccatgatttgaca 111
|||| |||||||||||| |||||| ||||||||| | |||||| ||||||||||| |
Sbjct: 55 acagtttgcatgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgata 114
Query: 112 atgtggtgctacagtaaatatttgctaatgacggattaattaggcttaataaatttgtct 171
|| ||||| ||||||||| ||||||||||| |||||||||| ||||| ||||| ||||
Sbjct: 115 atatggtgttacagtaaacttttgctaatgatagattaattagccttaacaaattcgtct 174
Query: 172 cgcagtttacaggcggaatctgtaatttgttttgttattagtctacgtttaatactttaa 231
| ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 175 cttggtttacaggcggatcctgcaatttgttttgttattagactacgtttaatactttaa 234
Query: 232 atgtgtgtccgtatatt 248
|||||||||||||||||
Sbjct: 235 atgtgtgtccgtatatt 251
>42371_osa-MIR2124b:mirbase
Length = 239
Score = 174 bits (88), Expect = 2e-44
Identities = 208/249 (83%), Gaps = 18/249 (7%)
Strand = Plus / Plus
Query: 4 tttggacacatgcatgaagcattaaatgt----gaaaaaataaaccaattgcacagattg 59
|||||||||||||||| || ||||||| | |||||||||| | |||| |||||||||
Sbjct: 4 tttggacacatgcatggagtattaaatatagacgaaaaaataa-ctaattacacagattg 62
Query: 60 catgtaaatcgcgagacgaatcttttgagcctaattataccatgatttgacaatgtggtg 119
| ||||||| ||||||| |||||||| || |||||| ||||||||||||||| |||||
Sbjct: 63 cgtgtaaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtg 122
Query: 120 ctacagtaaatatttgctaatgacggattaattaggcttaataaatttgtctcgcagttt 179
|||||||||| |||||||||| |||||||||||||||||||||||| || |||| ||||
Sbjct: 123 ctacagtaaacatttgctaataccggattaattaggcttaataaattcgtgtcgcggttt 182
Query: 180 acaggcggaatctgtaatttgttttgttattagtctacgtttaatactttaaatgtgtgt 239
||||||||| || ||||||| ||||||||||||||||||||||||||
Sbjct: 183 acaggcgga-------------ttcattattagactacgtttaatactttaaatgtgtgt 229
Query: 240 ccgtatatt 248
|||||||||
Sbjct: 230 ccgtatatt 238
>42092_osa-MIR445a:mirbase
Length = 268
Score = 129 bits (65), Expect = 1e-30
Identities = 98/109 (89%)
Strand = Plus / Minus
Query: 68 tcgcgagacgaatcttttgagcctaattataccatgatttgacaatgtggtgctacagta 127
||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||
Sbjct: 188 tcgcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagta 129
Query: 128 aatatttgctaatgacggattaattaggcttaataaatttgtctcgcag 176
|| ||| |||| | ||||||||||||||||| ||||| |||||||||
Sbjct: 128 aacttttcataattatggattaattaggcttaaaaaattcgtctcgcag 80
>42095_osa-MIR445d:mirbase
Length = 312
Score = 65.9 bits (33), Expect = 1e-11
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 68 tcgcgagacgaatcttttgagcctaattataccatgatttgacaatgtggtgctacagta 127
|||||||| |||||| ||||| ||||||| | |||||| | | ||||| ||||||| ||
Sbjct: 101 tcgcgagatgaatctattgagtctaattaatcaatgattagcctatgtgatgctacacta 160
Query: 128 aatatttgctaatgacggattaattaggcttaataaatttgtctc 172
|| || || |||| | ||||||||||||||||| || ||||||||
Sbjct: 161 aacatgtgttaattatggattaattaggcttaaaaattttgtctc 205
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 202 tttgttattagtctacgtttaatacttt 229
||||| ||||||||| ||||||||||||
Sbjct: 75 tttgtcattagtctatgtttaatacttt 48
>42099_osa-MIR445h:mirbase
Length = 277
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 68 tcgcgagacgaatcttttgagcctaattataccatgatt 106
||||||||||||||||||||| ||||||| |||||||||
Sbjct: 184 tcgcgagacgaatcttttgagtctaattacaccatgatt 146
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 144 ggattaattaggcttaataaatttgtctcgcag 176
||||||||||||||||| ||||| |||||||||
Sbjct: 125 ggattaattaggcttaaaaaattcgtctcgcag 93
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 195 aatttgttttgttattagtctacgtttaatact 227
|||| ||||| ||||||||||| ||||||||||
Sbjct: 74 aattagtttttttattagtctatgtttaatact 42
>42097_osa-MIR445f:mirbase
Length = 305
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 68 tcgcgagacgaatcttttgagcctaattataccatgatt 106
||||||||||||||||||||| ||||||| |||||||||
Sbjct: 199 tcgcgagacgaatcttttgagtctaattacaccatgatt 161
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 195 aatttgttttgttattagtctacgtttaatact 227
|||| ||||| ||||||||||| ||||||||||
Sbjct: 89 aattagtttttttattagtctatgtttaatact 57
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 144 ggattaattaggcttaataaatttgtctcgcag 176
||||||||||||||||| ||||| ||| |||||
Sbjct: 140 ggattaattaggcttaaaaaattcgtcccgcag 108
>42096_osa-MIR445e:mirbase
Length = 265
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 68 tcgcgagacgaatcttttgagcctaattataccatgatt 106
||||||||||||||||||||| ||||||| |||||||||
Sbjct: 178 tcgcgagacgaatcttttgagtctaattacaccatgatt 140
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 144 ggattaattaggcttaataaatttgtctcgcag 176
||||||||||||||||| ||||| |||||||||
Sbjct: 119 ggattaattaggcttaaaaaattcgtctcgcag 87
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 195 aatttgttttgttattagtctacgtttaatact 227
|||| ||||| ||||||||||| ||||||||||
Sbjct: 68 aattagtttttttattagtctatgtttaatact 36
>42093_osa-MIR445b:mirbase
Length = 264
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 68 tcgcgagacgaatcttttgagcctaattataccatgatt 106
||||||||||||||||||||| ||||||| |||||||||
Sbjct: 177 tcgcgagacgaatcttttgagtctaattacaccatgatt 139
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 144 ggattaattaggcttaataaatttgtctcgcag 176
||||||||||||||||| || || |||||||||
Sbjct: 118 ggattaattaggcttaaaaagttcgtctcgcag 86
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 206 ttattagtctacgtttaatactttaaat 233
||||||||||| |||||||||| |||||
Sbjct: 57 ttattagtctatgtttaatactctaaat 30
>42094_osa-MIR445c:mirbase
Length = 260
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 71 cgagacgaatcttttgagcctaattataccatgatt 106
||||||||||||||| |||||||||| |||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattacaccatgatt 138
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 144 ggattaattaggcttaataaatttgtctcgcag 176
||||||||||||||||| ||||| |||||||||
Sbjct: 117 ggattaattaggcttaaaaaattcgtctcgcag 85
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 195 aatttgttttgttattagtctacgtttaatact 227
|||| ||||| ||||||||||| ||||||||||
Sbjct: 66 aattagtttttttattagtctatgtttaatact 34
>42098_osa-MIR445g:mirbase
Length = 275
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 144 ggattaattaggcttaataaatttgtctcgcag 176
||||||||||||||||| ||||| |||||||||
Sbjct: 124 ggattaattaggcttaaaaaattcgtctcgcag 92
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 68 tcgcgagacgaatcttttgagcctaattataccatgatt 106
|||| |||||||||||||||| |||||| |||||||||
Sbjct: 183 tcgcaagacgaatcttttgagtttaattacaccatgatt 145
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 195 aatttgttttgttattagtctacgtttaatact 227
|||| ||||| ||||||||||| ||||||||||
Sbjct: 73 aattagtttttttattagtctatgtttaatact 41
