miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42376_osa-MIR2124g:mirbase
Length = 251
Score = 240 bits (121), Expect = 4e-64
Identities = 206/237 (86%), Gaps = 13/237 (5%)
Strand = Plus / Plus
Query: 16 catggagtattaaatatagacgaaaaaataactaattacacagattgcgtgtaaattgcg 75
|||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15 catggagtattaaatataatcgagaaaataactaattacacagattgcgtgtaaattgcg 74
Query: 76 agacaaatcttttaagtctaattgcgccatgatttgacaatatggtgctacagtaaacat 135
| || ||||||||||| ||||||| ||||||| ||||||| || |||||||||||||||
Sbjct: 75 acacgaatcttttaagcataattgctccatgatctgacaatgtgatgctacagtaaacat 134
Query: 136 ttgctaataccggattaattaggcttaataaattcgtgtcgcggtttacaggcggattc- 194
||||||||| || ||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 135 ttgctaataacgaattaattagtcttaataaattcgtctcgcggtttacaggcggattct 194
Query: 195 ------------attattagactacgtttaatactttaaatgtgtgtccgtatattc 239
||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 195 ctaatttgttttgttattagtctacatttaatactttaaatgtgtgtccgtatattc 251
>42079_osa-MIR442:mirbase
Length = 233
Score = 220 bits (111), Expect = 4e-58
Identities = 163/179 (91%), Gaps = 1/179 (0%)
Strand = Plus / Plus
Query: 17 atggagtattaaatatagacgaaaa-aataactaattacacagattgcgtgtaaattgcg 75
||||||||||||||||| | ||||| |||||||||||| |||||| |||||||||||||
Sbjct: 8 atggagtattaaatataaatgaaaaaaataactaattatacagatgacgtgtaaattgcg 67
Query: 76 agacaaatcttttaagtctaattgcgccatgatttgacaatatggtgctacagtaaacat 135
|||| ||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 68 agacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctacagtaaacat 127
Query: 136 ttgctaataccggattaattaggcttaataaattcgtgtcgcggtttacaggcggattc 194
|||||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 128 ttgctaatgacggattaattaggcttaataaattcgtctcgcagtttacagacggattc 186
>42375_osa-MIR2124f:mirbase
Length = 252
Score = 216 bits (109), Expect = 6e-57
Identities = 212/249 (85%), Gaps = 13/249 (5%)
Strand = Plus / Plus
Query: 4 tttggacacatgcatggagtattaaatatagacgaaaaaataactaattacacagattgc 63
|||| |||||||||||||||||||||| | |||||||||||||||| ||| |||| ||||
Sbjct: 4 tttgaacacatgcatggagtattaaatgttgacgaaaaaataactacttaaacagtttgc 63
Query: 64 gtgtaaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtgc 123
|||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 64 atgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgataatatggtgt 123
Query: 124 tacagtaaacatttgctaataccggattaattaggcttaataaattcgtgtcgcggttta 183
|||||||||| ||||||||| |||||||||| ||||| |||||||| || ||||||
Sbjct: 124 tacagtaaacttttgctaatgatagattaattagccttaacaaattcgtctcttggttta 183
Query: 184 caggcgga-------------ttcattattagactacgtttaatactttaaatgtgtgtc 230
|||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 184 caggcggatcctgcaatttgttttgttattagactacgtttaatactttaaatgtgtgtc 243
Query: 231 cgtatattc 239
|||||||||
Sbjct: 244 cgtatattc 252
>42374_osa-MIR2124e:mirbase
Length = 247
Score = 216 bits (109), Expect = 6e-57
Identities = 212/249 (85%), Gaps = 18/249 (7%)
Strand = Plus / Plus
Query: 4 tttggacacatgcatggagtattaaatatagacgaaaaaataactaattacacagattgc 63
|||||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||
Sbjct: 4 tttggacacatgcatggagtattaaatata-----aaaaaaaaccaattacacaaattgc 58
Query: 64 gtgtaaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtgc 123
|||||||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||
Sbjct: 59 gtgtaaattgcgagacgaatcttttaagcctaattgctccatgatttgacaatgtggtgc 118
Query: 124 tacagtaaacatttgctaataccggattaattaggcttaataaattcgtgtcgcggttta 183
|||| ||||||||||||||| | |||||||||| | |||||||||||| |||| |||||
Sbjct: 119 tacaataaacatttgctaatgacagattaattagacataataaattcgtctcgcagttta 178
Query: 184 caggcgga-------------ttcattattagactacgtttaatactttaaatgtgtgtc 230
||||||| || ||||||| |||||||||||||||||||||||||||
Sbjct: 179 taggcggaatatgtaatttgttttgttattagtctacgtttaatactttaaatgtgtgtc 238
Query: 231 cgtatattc 239
|||||||||
Sbjct: 239 cgtatattc 247
>42372_osa-MIR2124c:mirbase
Length = 248
Score = 180 bits (91), Expect = 3e-46
Identities = 198/236 (83%), Gaps = 17/236 (7%)
Strand = Plus / Plus
Query: 17 atggagtattaaatatagacgaaaaaataactaattacacagattgcgtgtaaattgcga 76
||||| ||||||||||||| |||| ||| |||||||||| || ||||||||||||||
Sbjct: 17 atggactattaaatataga----aaaaaaaccaattacacagtttacgtgtaaattgcga 72
Query: 77 gacaaatcttttaagtctaattgcgccatgatttgacaatatggtgctacagtaaacatt 136
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||
Sbjct: 73 gacaaatcttttaagtctaattgcgccatgatttgacaacgtggtggtacagtaaatatt 132
Query: 137 tgctaataccggattaattaggcttaataaattcgtgtcgcggtttacaggcgga----- 191
||||||| ||||||||||||||||||||||||| ||| |||| | ||||||
Sbjct: 133 tgctaatgatagattaattaggcttaataaattcgtctcgtagttttctggcggaatctg 192
Query: 192 --------ttcattattagactacgtttaatactttaaatgtgtgtccgtatattc 239
|| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 193 taatttattttgttattagacaacgtttaatactttaaatgtgtgtccgtatattc 248
>42373_osa-MIR2124d:mirbase
Length = 250
Score = 178 bits (90), Expect = 1e-45
Identities = 196/233 (84%), Gaps = 15/233 (6%)
Strand = Plus / Plus
Query: 20 gagtattaaatatagacgaaaaaataactaattacacagattgcgtgtaaattgcgagac 79
||||||||||||||| | ||||| ||| |||| |||||| ||||||||||||||||||
Sbjct: 20 gagtattaaatatag--ggaaaaaaaaccaatttcacagactgcgtgtaaattgcgagag 77
Query: 80 aaatcttttaagtctaattgcgccatgatttgacaatatggtgctacagtaaacatttgc 139
||||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||
Sbjct: 78 gaatcttttaagcctaattgcgctatgatttgacaatgtggtgctacagtaaatatttgc 137
Query: 140 taataccggattaattaggcttaataaattcgtgtcgcggtttacaggcgga-------- 191
|||| || ||||||||||||||||||||||| |||| |||| | ||||||
Sbjct: 138 taatgacgaattaattaggcttaataaattcgactcgcagttttctggcggaatctgtaa 197
Query: 192 -----ttcattattagactacgtttaatactttaaatgtgtgtccgtatattc 239
|| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 198 tttattttgttattagactatgtttaatactttaaatgtgtgtccgtatattc 250
>42370_osa-MIR2124a:mirbase
Length = 249
Score = 174 bits (88), Expect = 2e-44
Identities = 208/249 (83%), Gaps = 18/249 (7%)
Strand = Plus / Plus
Query: 4 tttggacacatgcatggagtattaaatatagacgaaaaaataa-ctaattacacagattg 62
|||||||||||||||| || ||||||| | |||||||||| | |||| |||||||||
Sbjct: 4 tttggacacatgcatgaagcattaaatgt----gaaaaaataaaccaattgcacagattg 59
Query: 63 cgtgtaaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtg 122
| ||||||| ||||||| |||||||| || |||||| ||||||||||||||| |||||
Sbjct: 60 catgtaaatcgcgagacgaatcttttgagcctaattataccatgatttgacaatgtggtg 119
Query: 123 ctacagtaaacatttgctaataccggattaattaggcttaataaattcgtgtcgcggttt 182
|||||||||| |||||||||| |||||||||||||||||||||||| || |||| ||||
Sbjct: 120 ctacagtaaatatttgctaatgacggattaattaggcttaataaatttgtctcgcagttt 179
Query: 183 acaggcgga-------------ttcattattagactacgtttaatactttaaatgtgtgt 229
||||||||| || ||||||| ||||||||||||||||||||||||||
Sbjct: 180 acaggcggaatctgtaatttgttttgttattagtctacgtttaatactttaaatgtgtgt 239
Query: 230 ccgtatatt 238
|||||||||
Sbjct: 240 ccgtatatt 248
>42378_osa-MIR2124i:mirbase
Length = 250
Score = 155 bits (78), Expect = 2e-38
Identities = 202/245 (82%), Gaps = 15/245 (6%)
Strand = Plus / Plus
Query: 8 gacacatgcatggagtattaaatatagacgaaaaaataactaattacacagattgcgtgt 67
|||| ||| ||| ||||||||||||| |||||| || |||||||| |||||||||||
Sbjct: 8 gacatatgtatgtagtattaaatatat--gaaaaagaaaataattacatagattgcgtgt 65
Query: 68 aaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtgctaca 127
|||||| || || ||||||||||| |||||||| ||||||| ||||||| ||||||||||
Sbjct: 66 aaattgtgaaacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctaca 125
Query: 128 gtaaacatttgctaataccggattaattaggcttaataaattcgtgtcgcggtttacagg 187
||||||||||| ||||| |||||||| |||||||||||||||| ||| ||||||| |
Sbjct: 126 gtaaacatttgttaataatggattaatcaggcttaataaattcgcctcgtagtttacaag 185
Query: 188 cgga-------------ttcattattagactacgtttaatactttaaatgtgtgtccgta 234
||| ||| || |||| |||||||||||||||||||||||||||||||
Sbjct: 186 tggaatctgtaatttgtttcgttgttagcctacgtttaatactttaaatgtgtgtccgta 245
Query: 235 tattc 239
|||||
Sbjct: 246 tattc 250
>42377_osa-MIR2124h:mirbase
Length = 275
Score = 131 bits (66), Expect = 3e-31
Identities = 110/124 (88%), Gaps = 3/124 (2%)
Strand = Plus / Plus
Query: 4 tttggacacatgcatggagtattaaatatagacgaaaaaataactaattacacagattgc 63
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 14 tttggacacatgcatggagtattaaatataat---aaaaataactaattacacagattgt 70
Query: 64 gtgtaaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtgc 123
||||||||| ||||| ||||||||||| |||||||| | |||||||||||| ||||||
Sbjct: 71 gtgtaaattacgagatgaatcttttaagcctaattgcttcttgatttgacaatgtggtgc 130
Query: 124 taca 127
||||
Sbjct: 131 taca 134
>42092_osa-MIR445a:mirbase
Length = 268
Score = 97.6 bits (49), Expect = 4e-21
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 73 gcgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtgctacagtaaa 132
||||||| |||||||| ||||||||| | ||||||||||||||| || ||||||||||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaa 127
Query: 133 catttgctaataccggattaattaggcttaataaattcgtgtcgc 177
| ||| |||| ||||||||||||||||| |||||||| ||||
Sbjct: 126 cttttcataattatggattaattaggcttaaaaaattcgtctcgc 82
>42099_osa-MIR445h:mirbase
Length = 277
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 ggattaattaggcttaataaattcgtgtcgc 177
||||||||||||||||| |||||||| ||||
Sbjct: 125 ggattaattaggcttaaaaaattcgtctcgc 95
>42098_osa-MIR445g:mirbase
Length = 275
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 ggattaattaggcttaataaattcgtgtcgc 177
||||||||||||||||| |||||||| ||||
Sbjct: 124 ggattaattaggcttaaaaaattcgtctcgc 94
>42096_osa-MIR445e:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 ggattaattaggcttaataaattcgtgtcgc 177
||||||||||||||||| |||||||| ||||
Sbjct: 119 ggattaattaggcttaaaaaattcgtctcgc 89
>42094_osa-MIR445c:mirbase
Length = 260
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 ggattaattaggcttaataaattcgtgtcgc 177
||||||||||||||||| |||||||| ||||
Sbjct: 117 ggattaattaggcttaaaaaattcgtctcgc 87
Score = 40.1 bits (20), Expect = 8e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 74 cgagacaaatcttttaagtctaattgcgccatgatt 109
|||||| ||||||||||| |||||| | ||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattacaccatgatt 138
>42097_osa-MIR445f:mirbase
Length = 305
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 147 ggattaattaggcttaataaattcgt 172
||||||||||||||||| ||||||||
Sbjct: 140 ggattaattaggcttaaaaaattcgt 115
