miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42372_osa-MIR2124c:mirbase
Length = 248
Score = 274 bits (138), Expect = 3e-74
Identities = 177/190 (93%)
Strand = Plus / Plus
Query: 61 cgtgtaaattgcgagaggaatcttttaagcctaattgcgctatgatttgacaatgtggtg 120
|||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||||||
Sbjct: 59 cgtgtaaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaacgtggtg 118
Query: 121 ctacagtaaatatttgctaatgacgaattaattaggcttaataaattcgactcgcagttt 180
|||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||
Sbjct: 119 gtacagtaaatatttgctaatgatagattaattaggcttaataaattcgtctcgtagttt 178
Query: 181 tctggcggaatctgtaatttattttgttattagactatgtttaatactttaaatgtgtgt 240
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 179 tctggcggaatctgtaatttattttgttattagacaacgtttaatactttaaatgtgtgt 238
Query: 241 ccgtatattc 250
||||||||||
Sbjct: 239 ccgtatattc 248
>42370_osa-MIR2124a:mirbase
Length = 249
Score = 264 bits (133), Expect = 3e-71
Identities = 187/205 (91%)
Strand = Plus / Plus
Query: 45 ccaatttcacagactgcgtgtaaattgcgagaggaatcttttaagcctaattgcgctatg 104
|||||| |||||| ||| ||||||| |||||| ||||||||| ||||||||| | |||
Sbjct: 44 ccaattgcacagattgcatgtaaatcgcgagacgaatcttttgagcctaattataccatg 103
Query: 105 atttgacaatgtggtgctacagtaaatatttgctaatgacgaattaattaggcttaataa 164
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 104 atttgacaatgtggtgctacagtaaatatttgctaatgacggattaattaggcttaataa 163
Query: 165 attcgactcgcagttttctggcggaatctgtaatttattttgttattagactatgtttaa 224
||| | |||||||||| | ||||||||||||||||| |||||||||||| ||| ||||||
Sbjct: 164 atttgtctcgcagtttacaggcggaatctgtaatttgttttgttattagtctacgtttaa 223
Query: 225 tactttaaatgtgtgtccgtatatt 249
|||||||||||||||||||||||||
Sbjct: 224 tactttaaatgtgtgtccgtatatt 248
>42374_osa-MIR2124e:mirbase
Length = 247
Score = 250 bits (126), Expect = 4e-67
Identities = 186/206 (90%)
Strand = Plus / Plus
Query: 45 ccaatttcacagactgcgtgtaaattgcgagaggaatcttttaagcctaattgcgctatg 104
|||||| |||| | |||||||||||||||||| ||||||||||||||||||||| | |||
Sbjct: 42 ccaattacacaaattgcgtgtaaattgcgagacgaatcttttaagcctaattgctccatg 101
Query: 105 atttgacaatgtggtgctacagtaaatatttgctaatgacgaattaattaggcttaataa 164
||||||||||||||||||||| |||| ||||||||||||| ||||||||| | ||||||
Sbjct: 102 atttgacaatgtggtgctacaataaacatttgctaatgacagattaattagacataataa 161
Query: 165 attcgactcgcagttttctggcggaatctgtaatttattttgttattagactatgtttaa 224
||||| |||||||||| |||||||| |||||||| |||||||||||| ||| ||||||
Sbjct: 162 attcgtctcgcagtttataggcggaatatgtaatttgttttgttattagtctacgtttaa 221
Query: 225 tactttaaatgtgtgtccgtatattc 250
||||||||||||||||||||||||||
Sbjct: 222 tactttaaatgtgtgtccgtatattc 247
>42376_osa-MIR2124g:mirbase
Length = 251
Score = 230 bits (116), Expect = 4e-61
Identities = 182/204 (89%)
Strand = Plus / Plus
Query: 47 aatttcacagactgcgtgtaaattgcgagaggaatcttttaagcctaattgcgctatgat 106
|||| |||||| |||||||||||||||| | ||||||||||||| ||||||| | |||||
Sbjct: 48 aattacacagattgcgtgtaaattgcgacacgaatcttttaagcataattgctccatgat 107
Query: 107 ttgacaatgtggtgctacagtaaatatttgctaatgacgaattaattaggcttaataaat 166
|||||||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 108 ctgacaatgtgatgctacagtaaacatttgctaataacgaattaattagtcttaataaat 167
Query: 167 tcgactcgcagttttctggcggaatctgtaatttattttgttattagactatgtttaata 226
||| ||||| |||| | |||||| ||| |||||| |||||||||||| ||| |||||||
Sbjct: 168 tcgtctcgcggtttacaggcggattctctaatttgttttgttattagtctacatttaata 227
Query: 227 ctttaaatgtgtgtccgtatattc 250
||||||||||||||||||||||||
Sbjct: 228 ctttaaatgtgtgtccgtatattc 251
>42079_osa-MIR442:mirbase
Length = 233
Score = 228 bits (115), Expect = 2e-60
Identities = 163/179 (91%)
Strand = Plus / Plus
Query: 61 cgtgtaaattgcgagaggaatcttttaagcctaattgcgctatgatttgacaatgtggtg 120
|||||||||||||||| ||||||||||||||||||||| | ||||| |||||||||||||
Sbjct: 55 cgtgtaaattgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtg 114
Query: 121 ctacagtaaatatttgctaatgacgaattaattaggcttaataaattcgactcgcagttt 180
|||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 115 ctacagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagttt 174
Query: 181 tctggcggaatctgtaatttattttgttattagactatgtttaatactttaaatgtgtg 239
| | |||| |||||||||| |||||||||||| ||| ||| ||||||| |||||||||
Sbjct: 175 acagacggattctgtaatttgttttgttattagtctacgttaaatacttcaaatgtgtg 233
>42378_osa-MIR2124i:mirbase
Length = 250
Score = 198 bits (100), Expect = 1e-51
Identities = 169/192 (88%)
Strand = Plus / Plus
Query: 59 tgcgtgtaaattgcgagaggaatcttttaagcctaattgcgctatgatttgacaatgtgg 118
||||||||||||| || | ||||||||||||||||||||| | ||||| |||||||||||
Sbjct: 59 tgcgtgtaaattgtgaaacgaatcttttaagcctaattgctccatgatctgacaatgtgg 118
Query: 119 tgctacagtaaatatttgctaatgacgaattaattaggcttaataaattcgactcgcagt 178
|||||||||||| ||||| |||| | | |||||| |||||||||||||||| |||| |||
Sbjct: 119 tgctacagtaaacatttgttaataatggattaatcaggcttaataaattcgcctcgtagt 178
Query: 179 tttctggcggaatctgtaatttattttgttattagactatgtttaatactttaaatgtgt 238
|| | | |||||||||||||| ||| ||| |||| ||| ||||||||||||||||||||
Sbjct: 179 ttacaagtggaatctgtaatttgtttcgttgttagcctacgtttaatactttaaatgtgt 238
Query: 239 gtccgtatattc 250
||||||||||||
Sbjct: 239 gtccgtatattc 250
>42375_osa-MIR2124f:mirbase
Length = 252
Score = 174 bits (88), Expect = 2e-44
Identities = 163/188 (86%)
Strand = Plus / Plus
Query: 63 tgtaaattgcgagaggaatcttttaagcctaattgcgctatgatttgacaatgtggtgct 122
|||||||||||||| ||||||||||| |||||||||| ||||||||| ||| ||||| |
Sbjct: 65 tgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgataatatggtgtt 124
Query: 123 acagtaaatatttgctaatgacgaattaattaggcttaataaattcgactcgcagttttc 182
|||||||| ||||||||||| ||||||||| ||||| ||||||| ||| |||| |
Sbjct: 125 acagtaaacttttgctaatgatagattaattagccttaacaaattcgtctcttggtttac 184
Query: 183 tggcggaatctgtaatttattttgttattagactatgtttaatactttaaatgtgtgtcc 242
|||||| ||| ||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 185 aggcggatcctgcaatttgttttgttattagactacgtttaatactttaaatgtgtgtcc 244
Query: 243 gtatattc 250
||||||||
Sbjct: 245 gtatattc 252
>42371_osa-MIR2124b:mirbase
Length = 239
Score = 167 bits (84), Expect = 5e-42
Identities = 172/204 (84%), Gaps = 13/204 (6%)
Strand = Plus / Plus
Query: 47 aatttcacagactgcgtgtaaattgcgagaggaatcttttaagcctaattgcgctatgat 106
|||| |||||| |||||||||||||||||| ||||||||||| |||||||||| |||||
Sbjct: 49 aattacacagattgcgtgtaaattgcgagacaaatcttttaagtctaattgcgccatgat 108
Query: 107 ttgacaatgtggtgctacagtaaatatttgctaatgacgaattaattaggcttaataaat 166
|||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||||
Sbjct: 109 ttgacaatatggtgctacagtaaacatttgctaataccggattaattaggcttaataaat 168
Query: 167 tcgactcgcagttttctggcggaatctgtaatttattttgttattagactatgtttaata 226
||| |||| |||| | |||||| || ||||||||||| ||||||||
Sbjct: 169 tcgtgtcgcggtttacaggcgga-------------ttcattattagactacgtttaata 215
Query: 227 ctttaaatgtgtgtccgtatattc 250
||||||||||||||||||||||||
Sbjct: 216 ctttaaatgtgtgtccgtatattc 239
>42377_osa-MIR2124h:mirbase
Length = 275
Score = 153 bits (77), Expect = 8e-38
Identities = 125/141 (88%)
Strand = Plus / Plus
Query: 110 acaatgtggtgctacagtaaatatttgctaatgacgaattaattaggcttaataaattcg 169
||||||||||||||||||||| || |||||| || | ||||||||||||||||||||| |
Sbjct: 132 acaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttg 191
Query: 170 actcgcagttttctggcggaatctgtaatttattttgttattagactatgtttaatactt 229
||||| |||| | | |||||||||||||| |||| ||| ||| |||||||||||||||
Sbjct: 192 tctcgcggtttacaagtggaatctgtaatttgttttattactagtctatgtttaatactt 251
Query: 230 taaatgtgtgtccgtatattc 250
|||||||||||||||||||||
Sbjct: 252 taaatgtgtgtccgtatattc 272
>42092_osa-MIR445a:mirbase
Length = 268
Score = 85.7 bits (43), Expect = 2e-17
Identities = 91/107 (85%)
Strand = Plus / Minus
Query: 71 gcgagaggaatcttttaagcctaattgcgctatgatttgacaatgtggtgctacagtaaa 130
|||||| ||||||||| || |||||| | | |||||||||||||||| ||||||||||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaa 127
Query: 131 tatttgctaatgacgaattaattaggcttaataaattcgactcgcag 177
||| |||| | | ||||||||||||||| ||||||| |||||||
Sbjct: 126 cttttcataattatggattaattaggcttaaaaaattcgtctcgcag 80
>42099_osa-MIR445h:mirbase
Length = 277
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 attaattaggcttaataaattcgactcgcag 177
||||||||||||||| ||||||| |||||||
Sbjct: 123 attaattaggcttaaaaaattcgtctcgcag 93
>42098_osa-MIR445g:mirbase
Length = 275
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 attaattaggcttaataaattcgactcgcag 177
||||||||||||||| ||||||| |||||||
Sbjct: 122 attaattaggcttaaaaaattcgtctcgcag 92
>42096_osa-MIR445e:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 attaattaggcttaataaattcgactcgcag 177
||||||||||||||| ||||||| |||||||
Sbjct: 117 attaattaggcttaaaaaattcgtctcgcag 87
>42094_osa-MIR445c:mirbase
Length = 260
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 attaattaggcttaataaattcgactcgcag 177
||||||||||||||| ||||||| |||||||
Sbjct: 115 attaattaggcttaaaaaattcgtctcgcag 85
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 72 cgagaggaatcttttaagcctaatt 96
||||| |||||||||||||||||||
Sbjct: 173 cgagacgaatcttttaagcctaatt 149
>42095_osa-MIR445d:mirbase
Length = 312
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 203 tttgttattagactatgtttaatacttt 230
||||| ||||| ||||||||||||||||
Sbjct: 75 tttgtcattagtctatgtttaatacttt 48
>42093_osa-MIR445b:mirbase
Length = 264
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 207 ttattagactatgtttaatactttaaat 234
||||||| |||||||||||||| |||||
Sbjct: 57 ttattagtctatgtttaatactctaaat 30
