miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42370_osa-MIR2124a:mirbase
Length = 249
Score = 280 bits (141), Expect = 5e-76
Identities = 189/205 (92%)
Strand = Plus / Plus
Query: 42 ccaattacacaaattgcgtgtaaattgcgagacgaatcttttaagcctaattgctccatg 101
|||||| |||| ||||| ||||||| |||||||||||||||| ||||||||| |||||
Sbjct: 44 ccaattgcacagattgcatgtaaatcgcgagacgaatcttttgagcctaattataccatg 103
Query: 102 atttgacaatgtggtgctacaataaacatttgctaatgacagattaattagacataataa 161
||||||||||||||||||||| |||| ||||||||||||| |||||||||| | ||||||
Sbjct: 104 atttgacaatgtggtgctacagtaaatatttgctaatgacggattaattaggcttaataa 163
Query: 162 attcgtctcgcagtttataggcggaatatgtaatttgttttgttattagtctacgtttaa 221
||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 164 atttgtctcgcagtttacaggcggaatctgtaatttgttttgttattagtctacgtttaa 223
Query: 222 tactttaaatgtgtgtccgtatatt 246
|||||||||||||||||||||||||
Sbjct: 224 tactttaaatgtgtgtccgtatatt 248
>42376_osa-MIR2124g:mirbase
Length = 251
Score = 270 bits (136), Expect = 5e-73
Identities = 187/204 (91%)
Strand = Plus / Plus
Query: 44 aattacacaaattgcgtgtaaattgcgagacgaatcttttaagcctaattgctccatgat 103
||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 48 aattacacagattgcgtgtaaattgcgacacgaatcttttaagcataattgctccatgat 107
Query: 104 ttgacaatgtggtgctacaataaacatttgctaatgacagattaattagacataataaat 163
|||||||||| ||||||| ||||||||||||||| || ||||||||| | ||||||||
Sbjct: 108 ctgacaatgtgatgctacagtaaacatttgctaataacgaattaattagtcttaataaat 167
Query: 164 tcgtctcgcagtttataggcggaatatgtaatttgttttgttattagtctacgtttaata 223
||||||||| ||||| ||||||| | | |||||||||||||||||||||||| |||||||
Sbjct: 168 tcgtctcgcggtttacaggcggattctctaatttgttttgttattagtctacatttaata 227
Query: 224 ctttaaatgtgtgtccgtatattc 247
||||||||||||||||||||||||
Sbjct: 228 ctttaaatgtgtgtccgtatattc 251
>42079_osa-MIR442:mirbase
Length = 233
Score = 268 bits (135), Expect = 2e-72
Identities = 168/179 (93%)
Strand = Plus / Plus
Query: 58 cgtgtaaattgcgagacgaatcttttaagcctaattgctccatgatttgacaatgtggtg 117
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 55 cgtgtaaattgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtg 114
Query: 118 ctacaataaacatttgctaatgacagattaattagacataataaattcgtctcgcagttt 177
||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||||
Sbjct: 115 ctacagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagttt 174
Query: 178 ataggcggaatatgtaatttgttttgttattagtctacgtttaatactttaaatgtgtg 236
| || |||| | ||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 175 acagacggattctgtaatttgttttgttattagtctacgttaaatacttcaaatgtgtg 233
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 60 tgtaaattgcgagacgaatcttttaagcctaatt 93
|||||| |||||||||||| | ||||||||||||
Sbjct: 177 tgtaaactgcgagacgaatttattaagcctaatt 144
>42373_osa-MIR2124d:mirbase
Length = 250
Score = 250 bits (126), Expect = 4e-67
Identities = 186/206 (90%)
Strand = Plus / Plus
Query: 42 ccaattacacaaattgcgtgtaaattgcgagacgaatcttttaagcctaattgctccatg 101
|||||| |||| | |||||||||||||||||| ||||||||||||||||||||| | |||
Sbjct: 45 ccaatttcacagactgcgtgtaaattgcgagaggaatcttttaagcctaattgcgctatg 104
Query: 102 atttgacaatgtggtgctacaataaacatttgctaatgacagattaattagacataataa 161
||||||||||||||||||||| |||| ||||||||||||| ||||||||| | ||||||
Sbjct: 105 atttgacaatgtggtgctacagtaaatatttgctaatgacgaattaattaggcttaataa 164
Query: 162 attcgtctcgcagtttataggcggaatatgtaatttgttttgttattagtctacgtttaa 221
||||| |||||||||| |||||||| |||||||| |||||||||||| ||| ||||||
Sbjct: 165 attcgactcgcagttttctggcggaatctgtaatttattttgttattagactatgtttaa 224
Query: 222 tactttaaatgtgtgtccgtatattc 247
||||||||||||||||||||||||||
Sbjct: 225 tactttaaatgtgtgtccgtatattc 250
>42372_osa-MIR2124c:mirbase
Length = 248
Score = 242 bits (122), Expect = 1e-64
Identities = 185/206 (89%)
Strand = Plus / Plus
Query: 42 ccaattacacaaattgcgtgtaaattgcgagacgaatcttttaagcctaattgctccatg 101
||||||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 43 ccaattacacagtttacgtgtaaattgcgagacaaatcttttaagtctaattgcgccatg 102
Query: 102 atttgacaatgtggtgctacaataaacatttgctaatgacagattaattagacataataa 161
||||||||| |||||| |||| |||| |||||||||||| ||||||||||| | ||||||
Sbjct: 103 atttgacaacgtggtggtacagtaaatatttgctaatgatagattaattaggcttaataa 162
Query: 162 attcgtctcgcagtttataggcggaatatgtaatttgttttgttattagtctacgtttaa 221
|||||||||| ||||| |||||||| |||||||| |||||||||||| | ||||||||
Sbjct: 163 attcgtctcgtagttttctggcggaatctgtaatttattttgttattagacaacgtttaa 222
Query: 222 tactttaaatgtgtgtccgtatattc 247
||||||||||||||||||||||||||
Sbjct: 223 tactttaaatgtgtgtccgtatattc 248
>42378_osa-MIR2124i:mirbase
Length = 250
Score = 230 bits (116), Expect = 4e-61
Identities = 182/204 (89%)
Strand = Plus / Plus
Query: 44 aattacacaaattgcgtgtaaattgcgagacgaatcttttaagcctaattgctccatgat 103
||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 47 aattacatagattgcgtgtaaattgtgaaacgaatcttttaagcctaattgctccatgat 106
Query: 104 ttgacaatgtggtgctacaataaacatttgctaatgacagattaattagacataataaat 163
|||||||||||||||||| |||||||||| |||| | ||||||| || | ||||||||
Sbjct: 107 ctgacaatgtggtgctacagtaaacatttgttaataatggattaatcaggcttaataaat 166
Query: 164 tcgtctcgcagtttataggcggaatatgtaatttgttttgttattagtctacgtttaata 223
||| |||| |||||| | | ||||| |||||||||||| ||| |||| ||||||||||||
Sbjct: 167 tcgcctcgtagtttacaagtggaatctgtaatttgtttcgttgttagcctacgtttaata 226
Query: 224 ctttaaatgtgtgtccgtatattc 247
||||||||||||||||||||||||
Sbjct: 227 ctttaaatgtgtgtccgtatattc 250
>42375_osa-MIR2124f:mirbase
Length = 252
Score = 200 bits (101), Expect = 4e-52
Identities = 170/193 (88%)
Strand = Plus / Plus
Query: 55 ttgcgtgtaaattgcgagacgaatcttttaagcctaattgctccatgatttgacaatgtg 114
|||| |||||||||||||| ||||||||||| |||||||| ||||||||||| ||| ||
Sbjct: 60 ttgcatgtaaattgcgagatgaatcttttaactctaattgcgccatgatttgataatatg 119
Query: 115 gtgctacaataaacatttgctaatgacagattaattagacataataaattcgtctcgcag 174
||| |||| ||||| ||||||||||| ||||||||||| | ||| ||||||||||| |
Sbjct: 120 gtgttacagtaaacttttgctaatgatagattaattagccttaacaaattcgtctcttgg 179
Query: 175 tttataggcggaatatgtaatttgttttgttattagtctacgtttaatactttaaatgtg 234
|||| ||||||| || |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 180 tttacaggcggatcctgcaatttgttttgttattagactacgtttaatactttaaatgtg 239
Query: 235 tgtccgtatattc 247
|||||||||||||
Sbjct: 240 tgtccgtatattc 252
>42371_osa-MIR2124b:mirbase
Length = 239
Score = 182 bits (92), Expect = 9e-47
Identities = 174/204 (85%), Gaps = 13/204 (6%)
Strand = Plus / Plus
Query: 44 aattacacaaattgcgtgtaaattgcgagacgaatcttttaagcctaattgctccatgat 103
||||||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 49 aattacacagattgcgtgtaaattgcgagacaaatcttttaagtctaattgcgccatgat 108
Query: 104 ttgacaatgtggtgctacaataaacatttgctaatgacagattaattagacataataaat 163
|||||||| |||||||||| ||||||||||||||| | |||||||||| | ||||||||
Sbjct: 109 ttgacaatatggtgctacagtaaacatttgctaataccggattaattaggcttaataaat 168
Query: 164 tcgtctcgcagtttataggcggaatatgtaatttgttttgttattagtctacgtttaata 223
|||| |||| ||||| ||||||| || ||||||| ||||||||||||
Sbjct: 169 tcgtgtcgcggtttacaggcgga-------------ttcattattagactacgtttaata 215
Query: 224 ctttaaatgtgtgtccgtatattc 247
||||||||||||||||||||||||
Sbjct: 216 ctttaaatgtgtgtccgtatattc 239
>42377_osa-MIR2124h:mirbase
Length = 275
Score = 174 bits (88), Expect = 2e-44
Identities = 215/262 (82%), Gaps = 15/262 (5%)
Strand = Plus / Plus
Query: 1 atgtttggacacatgcatggagtattaaatatnnnnnnnnn--ccaattacacaaattgc 58
|||||||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 11 atgtttggacacatgcatggagtattaaatataataaaaataactaattacacagattgt 70
Query: 59 gtgtaaattgcgagacgaatcttttaagcctaattgctccatgatttgacaa-------- 110
||||||||| ||||| |||||||||||||||||||||| | |||||||||||
Sbjct: 71 gtgtaaattacgagatgaatcttttaagcctaattgcttcttgatttgacaatgtggtgc 130
Query: 111 -----tgtggtgctacaataaacatttgctaatgacagattaattagacataataaattc 165
|||||||||||| ||||||| |||||| || |||||||||| | |||||||||
Sbjct: 131 tacaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaattt 190
Query: 166 gtctcgcagtttataggcggaatatgtaatttgttttgttattagtctacgtttaatact 225
||||||| ||||| | | ||||| ||||||||||||| ||| ||||||| ||||||||||
Sbjct: 191 gtctcgcggtttacaagtggaatctgtaatttgttttattactagtctatgtttaatact 250
Query: 226 ttaaatgtgtgtccgtatattc 247
||||||||||||||||||||||
Sbjct: 251 ttaaatgtgtgtccgtatattc 272
>42092_osa-MIR445a:mirbase
Length = 268
Score = 93.7 bits (47), Expect = 6e-20
Identities = 92/107 (85%)
Strand = Plus / Minus
Query: 68 gcgagacgaatcttttaagcctaattgctccatgatttgacaatgtggtgctacaataaa 127
|||||||||||||||| || |||||| | |||||||||||||||||| ||||||| ||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaa 127
Query: 128 catttgctaatgacagattaattagacataataaattcgtctcgcag 174
| ||| |||| | |||||||||| | ||| |||||||||||||||
Sbjct: 126 cttttcataattatggattaattaggcttaaaaaattcgtctcgcag 80
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 67 tgcgagacgaatcttttaagcctaatt 93
|||||||||||| ||||||||||||||
Sbjct: 81 tgcgagacgaattttttaagcctaatt 107
>42094_osa-MIR445c:mirbase
Length = 260
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 69 cgagacgaatcttttaagcctaattgctccatgatt 104
||||||||||||||||||||||||| | ||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattacaccatgatt 138
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 67 tgcgagacgaatcttttaagcctaatt 93
|||||||||||| ||||||||||||||
Sbjct: 86 tgcgagacgaattttttaagcctaatt 112
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 188 tatgtaatttgttttgttattagtctacgtttaatact 225
|||| |||| ||||| ||||||||||| ||||||||||
Sbjct: 71 tatgaaattagtttttttattagtctatgtttaatact 34
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 143 gattaattagacataataaattcgtctcgcag 174
|||||||||| | ||| |||||||||||||||
Sbjct: 116 gattaattaggcttaaaaaattcgtctcgcag 85
>42099_osa-MIR445h:mirbase
Length = 277
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 67 tgcgagacgaatcttttaagcctaatt 93
|||||||||||| ||||||||||||||
Sbjct: 94 tgcgagacgaattttttaagcctaatt 120
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 188 tatgtaatttgttttgttattagtctacgtttaatact 225
|||| |||| ||||| ||||||||||| ||||||||||
Sbjct: 79 tatgaaattagtttttttattagtctatgtttaatact 42
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 68 gcgagacgaatcttttaagcctaattgctccatgatt 104
|||||||||||||||| || |||||| | ||||||||
Sbjct: 182 gcgagacgaatcttttgagtctaattacaccatgatt 146
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 143 gattaattagacataataaattcgtctcgcag 174
|||||||||| | ||| |||||||||||||||
Sbjct: 124 gattaattaggcttaaaaaattcgtctcgcag 93
>42098_osa-MIR445g:mirbase
Length = 275
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 67 tgcgagacgaatcttttaagcctaatt 93
|||||||||||| ||||||||||||||
Sbjct: 93 tgcgagacgaattttttaagcctaatt 119
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 188 tatgtaatttgttttgttattagtctacgtttaatact 225
|||| |||| ||||| ||||||||||| ||||||||||
Sbjct: 78 tatgaaattagtttttttattagtctatgtttaatact 41
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 143 gattaattagacataataaattcgtctcgcag 174
|||||||||| | ||| |||||||||||||||
Sbjct: 123 gattaattaggcttaaaaaattcgtctcgcag 92
>42096_osa-MIR445e:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 67 tgcgagacgaatcttttaagcctaatt 93
|||||||||||| ||||||||||||||
Sbjct: 88 tgcgagacgaattttttaagcctaatt 114
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 188 tatgtaatttgttttgttattagtctacgtttaatact 225
|||| |||| ||||| ||||||||||| ||||||||||
Sbjct: 73 tatgaaattagtttttttattagtctatgtttaatact 36
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 68 gcgagacgaatcttttaagcctaattgctccatgatt 104
|||||||||||||||| || |||||| | ||||||||
Sbjct: 176 gcgagacgaatcttttgagtctaattacaccatgatt 140
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 143 gattaattagacataataaattcgtctcgcag 174
|||||||||| | ||| |||||||||||||||
Sbjct: 118 gattaattaggcttaaaaaattcgtctcgcag 87
>42097_osa-MIR445f:mirbase
Length = 305
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 188 tatgtaatttgttttgttattagtctacgtttaatact 225
|||| |||| ||||| ||||||||||| ||||||||||
Sbjct: 94 tatgaaattagtttttttattagtctatgtttaatact 57
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 68 gcgagacgaatcttttaagcctaattgctccatgatt 104
|||||||||||||||| || |||||| | ||||||||
Sbjct: 197 gcgagacgaatcttttgagtctaattacaccatgatt 161
>42093_osa-MIR445b:mirbase
Length = 264
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 68 gcgagacgaatcttttaagcctaattgctccatgatt 104
|||||||||||||||| || |||||| | ||||||||
Sbjct: 175 gcgagacgaatcttttgagtctaattacaccatgatt 139
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 204 ttattagtctacgtttaatactttaaat 231
||||||||||| |||||||||| |||||
Sbjct: 57 ttattagtctatgtttaatactctaaat 30
>42100_osa-MIR445i:mirbase
Length = 244
Score = 40.1 bits (20), Expect = 8e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 188 tatgtaatttgttttgttattagtctacgtttaatactttaaat 231
|||| |||| ||||| ||||||||||| ||||||||| |||||
Sbjct: 81 tatgaaattagtttttttattagtctatatttaatactctaaat 38
>42095_osa-MIR445d:mirbase
Length = 312
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 200 tttgttattagtctacgtttaatacttt 227
||||| ||||||||| ||||||||||||
Sbjct: 75 tttgtcattagtctatgtttaatacttt 48
